RNA–Protein interactions for RNA: ENST00000433949.7

CTCFL-209, Transcript of CCCTC-binding factor like, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CTCFL, Length 2,234 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-209ENST00000433949 ADGRB1O14514 1584 aa16.06■□□□□ 0.16
CTCFL-209ENST00000433949 ZNF142P52746 1687 aaPredicted RBP16.06■□□□□ 0.16
CTCFL-209ENST00000433949 WAPLQ7Z5K2 1190 aa16.05■□□□□ 0.16
CTCFL-209ENST00000433949 ADAMTS13Q76LX8 1427 aa16.05■□□□□ 0.16
CTCFL-209ENST00000433949 PRAM1Q96QH2 718 aa16.04■□□□□ 0.16
CTCFL-209ENST00000433949 ASXL1Q8IXJ9 1541 aa16.04■□□□□ 0.16
CTCFL-209ENST00000433949 POGKQ9P215 609 aa16.04■□□□□ 0.16
CTCFL-209ENST00000433949 KNSTRNQ9Y448 316 aa16.04■□□□□ 0.16
CTCFL-209ENST00000433949 YTHDC2Q9H6S0 1430 aaKnown RBP16.04■□□□□ 0.16
CTCFL-209ENST00000433949 NRXN3Q9Y4C0 1643 aa16.04■□□□□ 0.16
CTCFL-209ENST00000433949 NPC1L1Q9UHC9 1359 aa16.04■□□□□ 0.16
CTCFL-209ENST00000433949 CENPJQ9HC77 1338 aaPredicted RBP16.02■□□□□ 0.16
CTCFL-209ENST00000433949 TBX22Q9Y458 520 aa16.02■□□□□ 0.15
CTCFL-209ENST00000433949 LMTK3Q96Q04 1460 aa16.01■□□□□ 0.15
CTCFL-209ENST00000433949 CC2D1BQ5T0F9 858 aaKnown RBP16.01■□□□□ 0.15
CTCFL-209ENST00000433949 NUDCQ9Y266 331 aa16.01■□□□□ 0.15
CTCFL-209ENST00000433949 AMOTL2Q9Y2J4 779 aa16.01■□□□□ 0.15
CTCFL-209ENST00000433949 MINK1Q8N4C8 1332 aaPredicted RBP16■□□□□ 0.15
CTCFL-209ENST00000433949 QRICH2Q9H0J4 1663 aa16■□□□□ 0.15
CTCFL-209ENST00000433949 RBM33Q96EV2 1170 aaKnown RBP16■□□□□ 0.15
CTCFL-209ENST00000433949 NPHP4O75161 1426 aaPredicted RBP16■□□□□ 0.15
CTCFL-209ENST00000433949 PLEKHH1Q9ULM0 1364 aa15.99■□□□□ 0.15
CTCFL-209ENST00000433949 PTPRUQ92729 1446 aa15.97■□□□□ 0.15
CTCFL-209ENST00000433949 KCNA6P17658 529 aa15.97■□□□□ 0.15
CTCFL-209ENST00000433949 AMER1Q5JTC6 1135 aaPredicted RBP15.97■□□□□ 0.15
CTCFL-209ENST00000433949 MED14O60244 1454 aa15.96■□□□□ 0.15
CTCFL-209ENST00000433949 SETD1AO15047 1707 aaKnown RBP15.96■□□□□ 0.15
CTCFL-209ENST00000433949 PDE3BQ13370 1112 aa15.96■□□□□ 0.15
CTCFL-209ENST00000433949 ABCC11Q96J66 1382 aa15.96■□□□□ 0.14
CTCFL-209ENST00000433949 ROBO2Q9HCK4 1378 aa15.96■□□□□ 0.14
CTCFL-209ENST00000433949 BLMP54132 1417 aaPredicted RBP15.95■□□□□ 0.14
CTCFL-209ENST00000433949 ARHGEF28Q8N1W1 1705 aaKnown RBP15.95■□□□□ 0.14
CTCFL-209ENST00000433949 PPP4R2Q9NY27 417 aa15.94■□□□□ 0.14
CTCFL-209ENST00000433949 CABP2Q9NPB3 220 aa15.93■□□□□ 0.14
CTCFL-209ENST00000433949 RNF123Q5XPI4 1314 aa15.92■□□□□ 0.14
CTCFL-209ENST00000433949 PUS7Q96PZ0 661 aaKnown RBP15.92■□□□□ 0.14
CTCFL-209ENST00000433949 NUTM2FA1L443 756 aa15.92■□□□□ 0.14
CTCFL-209ENST00000433949 SRPK2P78362 688 aaKnown RBP15.92■□□□□ 0.14
CTCFL-209ENST00000433949 PPP2R1AP30153 589 aa15.91■□□□□ 0.14
CTCFL-209ENST00000433949 AEBP2Q6ZN18 517 aaPredicted RBP15.91■□□□□ 0.14
CTCFL-209ENST00000433949 EVC2Q86UK5 1308 aa15.9■□□□□ 0.14
CTCFL-209ENST00000433949 IRX6P78412 446 aaPredicted RBP15.89■□□□□ 0.13
CTCFL-209ENST00000433949 CDK19Q9BWU1 502 aa15.89■□□□□ 0.13
CTCFL-209ENST00000433949 TSHZ2Q9NRE2 1034 aa15.89■□□□□ 0.13
CTCFL-209ENST00000433949 USP32Q8NFA0 1604 aa15.89■□□□□ 0.13
CTCFL-209ENST00000433949 C14orf37Q86TY3 774 aa15.88■□□□□ 0.13
CTCFL-209ENST00000433949 DIP2AQ14689 1571 aa15.87■□□□□ 0.13
CTCFL-209ENST00000433949 WDR43Q15061 677 aaKnown RBP eCLIP15.87■□□□□ 0.13
CTCFL-209ENST00000433949 TECPR2O15040 1411 aa15.86■□□□□ 0.13
CTCFL-209ENST00000433949 PROSER2Q86WR7 435 aaPredicted RBP15.86■□□□□ 0.13
CTCFL-209ENST00000433949 SLC12A5Q9H2X9 1139 aa15.86■□□□□ 0.13
CTCFL-209ENST00000433949 SIRT1Q96EB6 747 aa15.86■□□□□ 0.13
CTCFL-209ENST00000433949 PIK3R4Q99570 1358 aa15.86■□□□□ 0.13
CTCFL-209ENST00000433949 STRCQ7RTU9 1775 aa15.86■□□□□ 0.13
CTCFL-209ENST00000433949 DLC1Q96QB1 1528 aa15.85■□□□□ 0.13
CTCFL-209ENST00000433949 FAM135BQ49AJ0 1406 aa15.85■□□□□ 0.13
CTCFL-209ENST00000433949 WASLO00401 505 aaPredicted RBP15.84■□□□□ 0.13
CTCFL-209ENST00000433949 ZNF335Q9H4Z2 1342 aaPredicted RBP15.84■□□□□ 0.13
CTCFL-209ENST00000433949 CPS1P31327 1500 aa15.83■□□□□ 0.13
CTCFL-209ENST00000433949 TULP4Q9NRJ4 1543 aa15.83■□□□□ 0.13
CTCFL-209ENST00000433949 NINLQ9Y2I6 1382 aa15.83■□□□□ 0.12
CTCFL-209ENST00000433949 CARD14Q9BXL6 1004 aa15.83■□□□□ 0.12
CTCFL-209ENST00000433949 ADAMTS8Q9UP79 889 aa15.83■□□□□ 0.12
CTCFL-209ENST00000433949 PTCH1Q13635 1447 aa15.81■□□□□ 0.12
CTCFL-209ENST00000433949 CABP1Q9NZU7 370 aa15.81■□□□□ 0.12
CTCFL-209ENST00000433949 CHD2O14647 1828 aaKnown RBP15.81■□□□□ 0.12
CTCFL-209ENST00000433949 NSD3Q9BZ95 1437 aa15.81■□□□□ 0.12
CTCFL-209ENST00000433949 KNDC1Q76NI1 1749 aa15.8■□□□□ 0.12
CTCFL-209ENST00000433949 MYT1Q01538 1121 aa15.8■□□□□ 0.12
CTCFL-209ENST00000433949 XRN1Q8IZH2 1706 aaKnown RBP15.8■□□□□ 0.12
CTCFL-209ENST00000433949 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.8■□□□□ 0.12
CTCFL-209ENST00000433949 NGEFQ8N5V2 710 aa15.79■□□□□ 0.12
CTCFL-209ENST00000433949 NUDT16Q96DE0 195 aaKnown RBP15.79■□□□□ 0.12
CTCFL-209ENST00000433949 RCAN3Q9UKA8 241 aa15.79■□□□□ 0.12
CTCFL-209ENST00000433949 DMRT2Q9Y5R5 561 aa15.79■□□□□ 0.12
CTCFL-209ENST00000433949 NSD2O96028 1365 aa15.79■□□□□ 0.12
CTCFL-209ENST00000433949 ANKRD36BQ8N2N9 1353 aa15.79■□□□□ 0.12
CTCFL-209ENST00000433949 POLR3AO14802 1390 aaPredicted RBP15.79■□□□□ 0.12
CTCFL-209ENST00000433949 CGNL1Q0VF96 1302 aa15.78■□□□□ 0.12
CTCFL-209ENST00000433949 SALL2Q9Y467 1007 aaPredicted RBP15.78■□□□□ 0.12
CTCFL-209ENST00000433949 PRR36Q9H6K5 1346 aa15.77■□□□□ 0.12
CTCFL-209ENST00000433949 SENP3-EIF4A1A0A087X0R7 540 aa15.77■□□□□ 0.12
CTCFL-209ENST00000433949 TMEM94Q12767 1356 aa15.77■□□□□ 0.11
CTCFL-209ENST00000433949 ATAD2Q6PL18 1390 aa15.76■□□□□ 0.11
CTCFL-209ENST00000433949 RRP1P56182 461 aaKnown RBP15.76■□□□□ 0.11
CTCFL-209ENST00000433949 PMFBP1Q8TBY8 1022 aa15.76■□□□□ 0.11
CTCFL-209ENST00000433949 MORC1Q86VD1 984 aa15.75■□□□□ 0.11
CTCFL-209ENST00000433949 CCDC61Q9Y6R9 512 aa15.75■□□□□ 0.11
CTCFL-209ENST00000433949 STRCP1A6NGW2 1772 aa15.74■□□□□ 0.11
CTCFL-209ENST00000433949 B4GALNT3Q6L9W6 998 aa15.73■□□□□ 0.11
CTCFL-209ENST00000433949 CDCA7LQ96GN5 454 aa15.73■□□□□ 0.11
CTCFL-209ENST00000433949 ANKRD26Q9UPS8 1709 aa15.73■□□□□ 0.11
CTCFL-209ENST00000433949 ZNF521Q96K83 1311 aa15.73■□□□□ 0.11
CTCFL-209ENST00000433949 PPIP5K1Q6PFW1 1433 aa15.72■□□□□ 0.11
CTCFL-209ENST00000433949 SHPRHQ149N8 1683 aa15.72■□□□□ 0.11
CTCFL-209ENST00000433949 C19orf44Q9H6X5 657 aa15.72■□□□□ 0.11
CTCFL-209ENST00000433949 CCDC136Q96JN2 1154 aa15.71■□□□□ 0.11
CTCFL-209ENST00000433949 NWD1Q149M9 1564 aa15.71■□□□□ 0.11
CTCFL-209ENST00000433949 GOLGA2Q08379 1002 aa15.71■□□□□ 0.1
CTCFL-209ENST00000433949 ESCO1Q5FWF5 840 aa15.71■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms