RNA–Protein interactions for RNA: ENST00000433274.6

SF1-209, Transcript of splicing factor 1, humanhuman

TSL 2 BASIC

Gene SF1, Length 2,317 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-209ENST00000433274 SRPK2P78362 688 aaKnown RBP20.41■□□□□ 0.86
SF1-209ENST00000433274 NSD3Q9BZ95 1437 aa20.4■□□□□ 0.86
SF1-209ENST00000433274 METP08581 1390 aa20.4■□□□□ 0.86
SF1-209ENST00000433274 WAPLQ7Z5K2 1190 aa20.38■□□□□ 0.85
SF1-209ENST00000433274 SUPT16HQ9Y5B9 1047 aaKnown RBP20.37■□□□□ 0.85
SF1-209ENST00000433274 LTKP29376 864 aa20.37■□□□□ 0.85
SF1-209ENST00000433274 DLC1Q96QB1 1528 aa20.37■□□□□ 0.85
SF1-209ENST00000433274 ABCC11Q96J66 1382 aa20.37■□□□□ 0.85
SF1-209ENST00000433274 PLEKHH1Q9ULM0 1364 aa20.36■□□□□ 0.85
SF1-209ENST00000433274 TXNDC2Q86VQ3 553 aa20.35■□□□□ 0.85
SF1-209ENST00000433274 ANKRD36BQ8N2N9 1353 aa20.34■□□□□ 0.85
SF1-209ENST00000433274 CDK19Q9BWU1 502 aa20.33■□□□□ 0.85
SF1-209ENST00000433274 ATAD2Q6PL18 1390 aa20.33■□□□□ 0.85
SF1-209ENST00000433274 FKBP8Q14318 412 aa20.32■□□□□ 0.84
SF1-209ENST00000433274 EID1Q9Y6B2 187 aa20.32■□□□□ 0.84
SF1-209ENST00000433274 NEFLP07196 543 aa20.32■□□□□ 0.84
SF1-209ENST00000433274 PLEKHG1Q9ULL1 1385 aa20.31■□□□□ 0.84
SF1-209ENST00000433274 NINLQ9Y2I6 1382 aa20.31■□□□□ 0.84
SF1-209ENST00000433274 ADAMTS13Q76LX8 1427 aa20.31■□□□□ 0.84
SF1-209ENST00000433274 CGNL1Q0VF96 1302 aa20.31■□□□□ 0.84
SF1-209ENST00000433274 MORC1Q86VD1 984 aa20.3■□□□□ 0.84
SF1-209ENST00000433274 THEMISQ8N1K5 641 aaPredicted RBP20.29■□□□□ 0.84
SF1-209ENST00000433274 A0A1W2PP64 1363 aa20.29■□□□□ 0.84
SF1-209ENST00000433274 RIMS1Q86UR5 1692 aaKnown RBP20.28■□□□□ 0.84
SF1-209ENST00000433274 WDR43Q15061 677 aaKnown RBP eCLIP20.28■□□□□ 0.84
SF1-209ENST00000433274 ADAMTS8Q9UP79 889 aa20.28■□□□□ 0.84
SF1-209ENST00000433274 SLIT1O75093 1534 aa20.28■□□□□ 0.84
SF1-209ENST00000433274 TNNT2P45379 298 aaPredicted RBP20.27■□□□□ 0.84
SF1-209ENST00000433274 SLC26A8Q96RN1 970 aa20.27■□□□□ 0.84
SF1-209ENST00000433274 SALL2Q9Y467 1007 aaPredicted RBP20.27■□□□□ 0.84
SF1-209ENST00000433274 USP32Q8NFA0 1604 aa20.27■□□□□ 0.84
SF1-209ENST00000433274 ARHGAP23Q9P227 1491 aa20.27■□□□□ 0.84
SF1-209ENST00000433274 TECPR2O15040 1411 aa20.27■□□□□ 0.84
SF1-209ENST00000433274 BLMP54132 1417 aaPredicted RBP20.26■□□□□ 0.83
SF1-209ENST00000433274 TERF2IPQ9NYB0 399 aa20.26■□□□□ 0.83
SF1-209ENST00000433274 FAM135BQ49AJ0 1406 aa20.25■□□□□ 0.83
SF1-209ENST00000433274 INSRP06213 1382 aa20.25■□□□□ 0.83
SF1-209ENST00000433274 CABP1Q9NZU7 370 aa20.25■□□□□ 0.83
SF1-209ENST00000433274 KNDC1Q76NI1 1749 aa20.25■□□□□ 0.83
SF1-209ENST00000433274 SIRT1Q96EB6 747 aa20.25■□□□□ 0.83
SF1-209ENST00000433274 SMG6Q86US8 1419 aaKnown RBP20.24■□□□□ 0.83
SF1-209ENST00000433274 CPS1P31327 1500 aa20.24■□□□□ 0.83
SF1-209ENST00000433274 CD163L1Q9NR16 1453 aa20.23■□□□□ 0.83
SF1-209ENST00000433274 WASLO00401 505 aaPredicted RBP20.23■□□□□ 0.83
SF1-209ENST00000433274 ROBO2Q9HCK4 1378 aa20.23■□□□□ 0.83
SF1-209ENST00000433274 NUDCQ9Y266 331 aa20.22■□□□□ 0.83
SF1-209ENST00000433274 HDGFL2Q7Z4V5 671 aaPredicted RBP20.22■□□□□ 0.83
SF1-209ENST00000433274 NSD2O96028 1365 aa20.22■□□□□ 0.83
SF1-209ENST00000433274 MED14O60244 1454 aa20.22■□□□□ 0.83
SF1-209ENST00000433274 CEP170BQ9Y4F5 1589 aaPredicted RBP20.21■□□□□ 0.83
SF1-209ENST00000433274 ADAMTSL3P82987 1691 aa20.2■□□□□ 0.82
SF1-209ENST00000433274 PTPRUQ92729 1446 aa20.19■□□□□ 0.82
SF1-209ENST00000433274 GGNBP2Q9H3C7 697 aa20.19■□□□□ 0.82
SF1-209ENST00000433274 POLR3AO14802 1390 aaPredicted RBP20.18■□□□□ 0.82
SF1-209ENST00000433274 TBX22Q9Y458 520 aa20.18■□□□□ 0.82
SF1-209ENST00000433274 IRX6P78412 446 aaPredicted RBP20.18■□□□□ 0.82
SF1-209ENST00000433274 FYB1O15117 783 aa20.16■□□□□ 0.82
SF1-209ENST00000433274 MTHFSP49914 203 aa20.16■□□□□ 0.82
SF1-209ENST00000433274 NUDT16Q96DE0 195 aaKnown RBP20.16■□□□□ 0.82
SF1-209ENST00000433274 AMOTL2Q9Y2J4 779 aa20.16■□□□□ 0.82
SF1-209ENST00000433274 PPIP5K1Q6PFW1 1433 aa20.15■□□□□ 0.82
SF1-209ENST00000433274 ATP7BP35670 1465 aa20.15■□□□□ 0.82
SF1-209ENST00000433274 CCDC146Q8IYE0 955 aa20.14■□□□□ 0.82
SF1-209ENST00000433274 NCKAP5LQ9HCH0 1330 aa20.14■□□□□ 0.81
SF1-209ENST00000433274 PDE3BQ13370 1112 aa20.13■□□□□ 0.81
SF1-209ENST00000433274 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.13■□□□□ 0.81
SF1-209ENST00000433274 CCDC61Q9Y6R9 512 aa20.12■□□□□ 0.81
SF1-209ENST00000433274 DIP2AQ14689 1571 aa20.12■□□□□ 0.81
SF1-209ENST00000433274 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.12■□□□□ 0.81
SF1-209ENST00000433274 CDCA7LQ96GN5 454 aa20.11■□□□□ 0.81
SF1-209ENST00000433274 CFAP53Q96M91 514 aa20.11■□□□□ 0.81
SF1-209ENST00000433274 PRR36Q9H6K5 1346 aa20.11■□□□□ 0.81
SF1-209ENST00000433274 ANKLE2Q86XL3 938 aa20.09■□□□□ 0.81
SF1-209ENST00000433274 CPSF1Q10570 1443 aaKnown RBP20.09■□□□□ 0.81
SF1-209ENST00000433274 NUTM2FA1L443 756 aa20.09■□□□□ 0.81
SF1-209ENST00000433274 ADGRB2O60241 1585 aa20.08■□□□□ 0.81
SF1-209ENST00000433274 ZNF142P52746 1687 aaPredicted RBP20.08■□□□□ 0.81
SF1-209ENST00000433274 PTCH1Q13635 1447 aa20.08■□□□□ 0.8
SF1-209ENST00000433274 ANKRD26Q9UPS8 1709 aa20.07■□□□□ 0.8
SF1-209ENST00000433274 APAF1O14727 1248 aa20.07■□□□□ 0.8
SF1-209ENST00000433274 SHPRHQ149N8 1683 aa20.07■□□□□ 0.8
SF1-209ENST00000433274 KIF20BQ96Q89 1820 aa20.06■□□□□ 0.8
SF1-209ENST00000433274 CDC42BPGQ6DT37 1551 aa20.06■□□□□ 0.8
SF1-209ENST00000433274 EDC4Q6P2E9 1401 aaKnown RBP20.06■□□□□ 0.8
SF1-209ENST00000433274 SETD1BQ9UPS6 1966 aaKnown RBP20.06■□□□□ 0.8
SF1-209ENST00000433274 KCNA6P17658 529 aa20.05■□□□□ 0.8
SF1-209ENST00000433274 MYT1Q01538 1121 aa20.04■□□□□ 0.8
SF1-209ENST00000433274 XRN1Q8IZH2 1706 aaKnown RBP20.03■□□□□ 0.8
SF1-209ENST00000433274 NME9Q86XW9 330 aa20.03■□□□□ 0.8
SF1-209ENST00000433274 PIK3R4Q99570 1358 aa20.02■□□□□ 0.8
SF1-209ENST00000433274 ZNF521Q96K83 1311 aa20.02■□□□□ 0.8
SF1-209ENST00000433274 RNF123Q5XPI4 1314 aa20.02■□□□□ 0.79
SF1-209ENST00000433274 ZNF692Q9BU19 519 aaPredicted RBP20.01■□□□□ 0.79
SF1-209ENST00000433274 RCAN3Q9UKA8 241 aa20.01■□□□□ 0.79
SF1-209ENST00000433274 U2AF1L5P0DN76 240 aaPredicted RBP20■□□□□ 0.79
SF1-209ENST00000433274 FBLN1P23142 703 aa20■□□□□ 0.79
SF1-209ENST00000433274 U2AF1Q01081 240 aaKnown RBP eCLIP20■□□□□ 0.794e-10■■■■■ 53.5
SF1-209ENST00000433274 ZRANB1Q9UGI0 708 aa20■□□□□ 0.79
SF1-209ENST00000433274 ITSN1Q15811 1721 aa19.99■□□□□ 0.79
SF1-209ENST00000433274 MON2Q7Z3U7 1717 aa19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms