RNA–Protein interactions for RNA: ENST00000432561.6

CHFR-203, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHFR, Length 2,648 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-203ENST00000432561 RPGRIP1LQ68CZ1 1315 aa21.78■■□□□ 1.08
CHFR-203ENST00000432561 NEXMIFQ5QGS0 1516 aa21.77■■□□□ 1.08
CHFR-203ENST00000432561 TRMT2AQ8IZ69 625 aaKnown RBP21.76■■□□□ 1.07
CHFR-203ENST00000432561 PIK3C2BO00750 1634 aa21.76■■□□□ 1.07
CHFR-203ENST00000432561 VGFO15240 615 aaPredicted RBP21.76■■□□□ 1.07
CHFR-203ENST00000432561 IPO9Q96P70 1041 aaKnown RBP21.76■■□□□ 1.07
CHFR-203ENST00000432561 ARHGEF28Q8N1W1 1705 aaKnown RBP21.75■■□□□ 1.07
CHFR-203ENST00000432561 POLR3AO14802 1390 aaPredicted RBP21.74■■□□□ 1.07
CHFR-203ENST00000432561 TULP4Q9NRJ4 1543 aa21.74■■□□□ 1.07
CHFR-203ENST00000432561 SHPRHQ149N8 1683 aa21.74■■□□□ 1.07
CHFR-203ENST00000432561 MTHFSP49914 203 aa21.74■■□□□ 1.07
CHFR-203ENST00000432561 NKTRP30414 1462 aaKnown RBP21.73■■□□□ 1.07
CHFR-203ENST00000432561 BACH2Q9BYV9 841 aa21.73■■□□□ 1.07
CHFR-203ENST00000432561 NBR1Q14596 966 aa21.73■■□□□ 1.07
CHFR-203ENST00000432561 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
CHFR-203ENST00000432561 WWC1Q8IX03 1113 aa21.72■■□□□ 1.07
CHFR-203ENST00000432561 EVC2Q86UK5 1308 aa21.71■■□□□ 1.07
CHFR-203ENST00000432561 E9PSI1 815 aa21.71■■□□□ 1.07
CHFR-203ENST00000432561 KDM2BQ8NHM5 1336 aa21.71■■□□□ 1.07
CHFR-203ENST00000432561 CGNL1Q0VF96 1302 aa21.7■■□□□ 1.06
CHFR-203ENST00000432561 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.7■■□□□ 1.06
CHFR-203ENST00000432561 ZBTB47Q9UFB7 747 aaPredicted RBP21.68■■□□□ 1.06
CHFR-203ENST00000432561 SRPK2P78362 688 aaKnown RBP21.67■■□□□ 1.06
CHFR-203ENST00000432561 TCP11L2Q8N4U5 519 aa21.67■■□□□ 1.06
CHFR-203ENST00000432561 MINK1Q8N4C8 1332 aaPredicted RBP21.67■■□□□ 1.06
CHFR-203ENST00000432561 MS4A1P11836 297 aa21.67■■□□□ 1.06
CHFR-203ENST00000432561 FAM69CQ0P6D2 419 aa21.66■■□□□ 1.06
CHFR-203ENST00000432561 ARHGAP31Q2M1Z3 1444 aa21.66■■□□□ 1.06
CHFR-203ENST00000432561 PREX1Q8TCU6 1659 aa21.65■■□□□ 1.06
CHFR-203ENST00000432561 TSPOAP1O95153 1857 aa21.65■■□□□ 1.06
CHFR-203ENST00000432561 ANKRD36BQ8N2N9 1353 aa21.65■■□□□ 1.06
CHFR-203ENST00000432561 RUNDC1Q96C34 613 aa21.64■■□□□ 1.05
CHFR-203ENST00000432561 SLC52A1Q9NWF4 448 aa21.64■■□□□ 1.05
CHFR-203ENST00000432561 GGNBP2Q9H3C7 697 aa21.63■■□□□ 1.05
CHFR-203ENST00000432561 CENPQQ7L2Z9 268 aaPredicted RBP21.63■■□□□ 1.05
CHFR-203ENST00000432561 PRAM1Q96QH2 718 aa21.63■■□□□ 1.05
CHFR-203ENST00000432561 A0A1W2PP64 1363 aa21.62■■□□□ 1.05
CHFR-203ENST00000432561 TMEM131LA2VDJ0 1609 aa21.62■■□□□ 1.05
CHFR-203ENST00000432561 PANK1Q8TE04 598 aa21.62■■□□□ 1.05
CHFR-203ENST00000432561 RGS3P49796 1198 aa21.61■■□□□ 1.05
CHFR-203ENST00000432561 USP32Q8NFA0 1604 aa21.61■■□□□ 1.05
CHFR-203ENST00000432561 U2AF1L5P0DN76 240 aaPredicted RBP21.61■■□□□ 1.05
CHFR-203ENST00000432561 U2AF1Q01081 240 aaKnown RBP eCLIP21.61■■□□□ 1.05
CHFR-203ENST00000432561 FRAT1Q92837 279 aaPredicted RBP21.61■■□□□ 1.05
CHFR-203ENST00000432561 BCL2L13Q9BXK5 485 aa21.6■■□□□ 1.05
CHFR-203ENST00000432561 CANXP27824 592 aaKnown RBP21.59■■□□□ 1.05
CHFR-203ENST00000432561 CFAP53Q96M91 514 aa21.59■■□□□ 1.05
CHFR-203ENST00000432561 POGKQ9P215 609 aa21.59■■□□□ 1.05
CHFR-203ENST00000432561 IQSEC2Q5JU85 1478 aa21.59■■□□□ 1.05
CHFR-203ENST00000432561 COG6Q9Y2V7 657 aa21.59■■□□□ 1.05
CHFR-203ENST00000432561 STAG3Q9UJ98 1225 aa21.59■■□□□ 1.05
CHFR-203ENST00000432561 MLECQ14165 292 aa21.58■■□□□ 1.05
CHFR-203ENST00000432561 TNNQ9UQP3 1299 aa21.58■■□□□ 1.05
CHFR-203ENST00000432561 PTPRMP28827 1452 aa21.58■■□□□ 1.04
CHFR-203ENST00000432561 NGEFQ8N5V2 710 aa21.56■■□□□ 1.04
CHFR-203ENST00000432561 IGHDP01880 384 aa21.56■■□□□ 1.04
CHFR-203ENST00000432561 U2SURPO15042 1029 aaKnown RBP21.55■■□□□ 1.04
CHFR-203ENST00000432561 ZFYVE9O95405 1425 aa21.55■■□□□ 1.04
CHFR-203ENST00000432561 YTHDC2Q9H6S0 1430 aaKnown RBP21.55■■□□□ 1.04
CHFR-203ENST00000432561 PUS7Q96PZ0 661 aaKnown RBP21.54■■□□□ 1.04
CHFR-203ENST00000432561 PHF23Q9BUL5 403 aaPredicted RBP21.54■■□□□ 1.04
CHFR-203ENST00000432561 RIMBP3CA6NJZ7 1639 aa21.54■■□□□ 1.04
CHFR-203ENST00000432561 RIMBP3BA6NNM3 1639 aa21.54■■□□□ 1.04
CHFR-203ENST00000432561 RIMBP3Q9UFD9 1639 aa21.54■■□□□ 1.04
CHFR-203ENST00000432561 ABCC11Q96J66 1382 aa21.53■■□□□ 1.04
CHFR-203ENST00000432561 RARSP54136 660 aaKnown RBP21.53■■□□□ 1.04
CHFR-203ENST00000432561 LAS1LQ9Y4W2 734 aaKnown RBP21.52■■□□□ 1.04
CHFR-203ENST00000432561 FYB1O15117 783 aa21.52■■□□□ 1.04
CHFR-203ENST00000432561 NSD2O96028 1365 aa21.52■■□□□ 1.03
CHFR-203ENST00000432561 FBLN1P23142 703 aa21.51■■□□□ 1.03
CHFR-203ENST00000432561 RLBP1P12271 317 aa21.51■■□□□ 1.03
CHFR-203ENST00000432561 WAPLQ7Z5K2 1190 aa21.51■■□□□ 1.03
CHFR-203ENST00000432561 CLUAP1Q96AJ1 413 aa21.51■■□□□ 1.03
CHFR-203ENST00000432561 DIP2BQ9P265 1576 aa21.5■■□□□ 1.03
CHFR-203ENST00000432561 C8orf34Q49A92 452 aa21.5■■□□□ 1.03
CHFR-203ENST00000432561 CDK19Q9BWU1 502 aa21.5■■□□□ 1.03
CHFR-203ENST00000432561 ALKQ9UM73 1620 aa21.5■■□□□ 1.03
CHFR-203ENST00000432561 CD163L1Q9NR16 1453 aa21.5■■□□□ 1.03
CHFR-203ENST00000432561 TSR2Q969E8 191 aaKnown RBP21.5■■□□□ 1.03
CHFR-203ENST00000432561 CABP1Q9NZU7 370 aa21.5■■□□□ 1.03
CHFR-203ENST00000432561 PDE3AQ14432 1141 aa21.49■■□□□ 1.03
CHFR-203ENST00000432561 WDR63Q8IWG1 891 aa21.49■■□□□ 1.03
CHFR-203ENST00000432561 CLTCQ00610 1675 aaKnown RBP21.48■■□□□ 1.03
CHFR-203ENST00000432561 SLC4A3P48751 1232 aa21.47■■□□□ 1.03
CHFR-203ENST00000432561 TERF2IPQ9NYB0 399 aa21.47■■□□□ 1.03
CHFR-203ENST00000432561 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.47■■□□□ 1.03
CHFR-203ENST00000432561 ATAD2Q6PL18 1390 aa21.47■■□□□ 1.03
CHFR-203ENST00000432561 FAM161AQ3B820 660 aa21.46■■□□□ 1.03
CHFR-203ENST00000432561 DEKP35659 375 aaKnown RBP21.45■■□□□ 1.02
CHFR-203ENST00000432561 CCDC27Q2M243 656 aa21.44■■□□□ 1.02
CHFR-203ENST00000432561 PPM1GO15355 546 aaPredicted RBP21.44■■□□□ 1.02
CHFR-203ENST00000432561 NLRP1Q9C000 1473 aa21.44■■□□□ 1.02
CHFR-203ENST00000432561 PLEKHF1Q96S99 279 aa21.43■■□□□ 1.02
CHFR-203ENST00000432561 NINLQ9Y2I6 1382 aa21.43■■□□□ 1.02
CHFR-203ENST00000432561 COL3A1P02461 1466 aaPredicted RBP21.43■■□□□ 1.02
CHFR-203ENST00000432561 ADGRB2O60241 1585 aa21.42■■□□□ 1.02
CHFR-203ENST00000432561 HDGFL2Q7Z4V5 671 aaPredicted RBP21.42■■□□□ 1.02
CHFR-203ENST00000432561 ARHGEF40Q8TER5 1519 aa21.42■■□□□ 1.02
CHFR-203ENST00000432561 TMPOP42166 694 aaKnown RBP21.42■■□□□ 1.02
CHFR-203ENST00000432561 MYH16Q9H6N6 1097 aa21.42■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms