RNA–Protein interactions for RNA: ENST00000431803.2

CDC42-IT1-201, CDC42 intronic transcript 1, humanhuman

TSL 1 (best) BASIC

Gene CDC42-IT1, Length 692 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-IT1-201ENST00000431803 PRR29P0C7W0 189 aa14.21□□□□□ -0.13
CDC42-IT1-201ENST00000431803 C14orf37Q86TY3 774 aa14.21□□□□□ -0.13
CDC42-IT1-201ENST00000431803 CADPS2Q86UW7 1296 aa14.21□□□□□ -0.13
CDC42-IT1-201ENST00000431803 AHDC1Q5TGY3 1603 aaPredicted RBP14.2□□□□□ -0.14
CDC42-IT1-201ENST00000431803 ATF3P18847 181 aa14.19□□□□□ -0.14
CDC42-IT1-201ENST00000431803 JCADQ9P266 1359 aa14.19□□□□□ -0.14
CDC42-IT1-201ENST00000431803 TRIM52Q96A61 297 aa14.18□□□□□ -0.14
CDC42-IT1-201ENST00000431803 SETD1AO15047 1707 aaKnown RBP14.17□□□□□ -0.14
CDC42-IT1-201ENST00000431803 PRKAR2AP13861 404 aaKnown RBP14.16□□□□□ -0.14
CDC42-IT1-201ENST00000431803 MST1RQ04912 1400 aa14.15□□□□□ -0.14
CDC42-IT1-201ENST00000431803 PRAG1Q86YV5 1406 aa14.15□□□□□ -0.14
CDC42-IT1-201ENST00000431803 ADGRL3Q9HAR2 1447 aa14.15□□□□□ -0.14
CDC42-IT1-201ENST00000431803 BRINP3Q76B58 766 aa14.15□□□□□ -0.14
CDC42-IT1-201ENST00000431803 ASXL1Q8IXJ9 1541 aa14.15□□□□□ -0.14
CDC42-IT1-201ENST00000431803 PTCH1Q13635 1447 aa14.15□□□□□ -0.14
CDC42-IT1-201ENST00000431803 SHPRHQ149N8 1683 aa14.14□□□□□ -0.15
CDC42-IT1-201ENST00000431803 FKBP8Q14318 412 aa14.14□□□□□ -0.15
CDC42-IT1-201ENST00000431803 NALCNQ8IZF0 1738 aa14.14□□□□□ -0.15
CDC42-IT1-201ENST00000431803 PPLO60437 1756 aa14.14□□□□□ -0.15
CDC42-IT1-201ENST00000431803 RPGRIP1LQ68CZ1 1315 aa14.14□□□□□ -0.15
CDC42-IT1-201ENST00000431803 LRP6O75581 1613 aa14.13□□□□□ -0.15
CDC42-IT1-201ENST00000431803 VGFO15240 615 aaPredicted RBP14.13□□□□□ -0.15
CDC42-IT1-201ENST00000431803 POTEAQ6S8J7 498 aa14.13□□□□□ -0.15
CDC42-IT1-201ENST00000431803 PROM2Q8N271 834 aa14.13□□□□□ -0.15
CDC42-IT1-201ENST00000431803 SPATA31A6Q5VVP1 1343 aa14.13□□□□□ -0.15
CDC42-IT1-201ENST00000431803 NHSL1Q5SYE7 1610 aa14.12□□□□□ -0.15
CDC42-IT1-201ENST00000431803 ROBO2Q9HCK4 1378 aa14.1□□□□□ -0.15
CDC42-IT1-201ENST00000431803 SPATA31E1Q6ZUB1 1445 aa14.1□□□□□ -0.15
CDC42-IT1-201ENST00000431803 SETD5Q9C0A6 1442 aa14.1□□□□□ -0.15
CDC42-IT1-201ENST00000431803 CHADLQ6NUI6 762 aa14.1□□□□□ -0.15
CDC42-IT1-201ENST00000431803 CCDC144AA2RUR9 1427 aa14.09□□□□□ -0.15
CDC42-IT1-201ENST00000431803 IFT172Q9UG01 1749 aa14.07□□□□□ -0.16
CDC42-IT1-201ENST00000431803 MPHOSPH9Q99550 1183 aa14.07□□□□□ -0.16
CDC42-IT1-201ENST00000431803 LAMC1P11047 1609 aa14.07□□□□□ -0.16
CDC42-IT1-201ENST00000431803 C1orf167Q5SNV9 1468 aa14.06□□□□□ -0.16
CDC42-IT1-201ENST00000431803 ADGRF5Q8IZF2 1346 aa14.05□□□□□ -0.16
CDC42-IT1-201ENST00000431803 ANKRD30BQ9BXX2 1392 aa14.05□□□□□ -0.16
CDC42-IT1-201ENST00000431803 ACIN1Q9UKV3 1341 aaKnown RBP14.04□□□□□ -0.16
CDC42-IT1-201ENST00000431803 TECPR2O15040 1411 aa14.04□□□□□ -0.16
CDC42-IT1-201ENST00000431803 MEX3CQ5U5Q3 659 aaKnown RBP14.03□□□□□ -0.16
CDC42-IT1-201ENST00000431803 LRRC59Q96AG4 307 aaKnown RBP14.03□□□□□ -0.16
CDC42-IT1-201ENST00000431803 PIK3C2GO75747 1445 aa14.03□□□□□ -0.16
CDC42-IT1-201ENST00000431803 CDC42BPGQ6DT37 1551 aa14.03□□□□□ -0.16
CDC42-IT1-201ENST00000431803 PNPLA6Q8IY17 1366 aa14.02□□□□□ -0.17
CDC42-IT1-201ENST00000431803 DDX17Q92841 729 aaKnown RBP14.02□□□□□ -0.17
CDC42-IT1-201ENST00000431803 RGL3Q3MIN7 710 aa14.01□□□□□ -0.17
CDC42-IT1-201ENST00000431803 ZNF772Q68DY9 489 aaPredicted RBP14.01□□□□□ -0.17
CDC42-IT1-201ENST00000431803 LRPPRCP42704 1394 aaKnown RBP14□□□□□ -0.17
CDC42-IT1-201ENST00000431803 KNDC1Q76NI1 1749 aa14□□□□□ -0.17
CDC42-IT1-201ENST00000431803 NRXN1Q9ULB1 1477 aa13.99□□□□□ -0.17
CDC42-IT1-201ENST00000431803 SOS2Q07890 1332 aaPredicted RBP13.99□□□□□ -0.17
CDC42-IT1-201ENST00000431803 ORAI2Q96SN7 254 aa13.99□□□□□ -0.17
CDC42-IT1-201ENST00000431803 ABCC11Q96J66 1382 aa13.98□□□□□ -0.17
CDC42-IT1-201ENST00000431803 NUTM2BA6NNL0 878 aaPredicted RBP13.98□□□□□ -0.17
CDC42-IT1-201ENST00000431803 NUTM2EB1AL46 878 aaPredicted RBP13.98□□□□□ -0.17
CDC42-IT1-201ENST00000431803 HAX1O00165 279 aa13.98□□□□□ -0.17
CDC42-IT1-201ENST00000431803 NUTM2AQ8IVF1 878 aaPredicted RBP13.98□□□□□ -0.17
CDC42-IT1-201ENST00000431803 MYOM2P54296 1465 aa13.98□□□□□ -0.17
CDC42-IT1-201ENST00000431803 RAB3GAP2Q9H2M9 1393 aa13.97□□□□□ -0.17
CDC42-IT1-201ENST00000431803 YTHDC2Q9H6S0 1430 aaKnown RBP13.96□□□□□ -0.18
CDC42-IT1-201ENST00000431803 AFF2P51816 1311 aa13.95□□□□□ -0.18
CDC42-IT1-201ENST00000431803 CDK12Q9NYV4 1490 aaPredicted RBP13.95□□□□□ -0.18
CDC42-IT1-201ENST00000431803 COL22A1Q8NFW1 1626 aaPredicted RBP13.95□□□□□ -0.18
CDC42-IT1-201ENST00000431803 TMEM132EQ6IEE7 984 aa13.95□□□□□ -0.18
CDC42-IT1-201ENST00000431803 WAPLQ7Z5K2 1190 aa13.95□□□□□ -0.18
CDC42-IT1-201ENST00000431803 CREBZFQ9NS37 354 aa13.95□□□□□ -0.18
CDC42-IT1-201ENST00000431803 STK26Q9P289 416 aa13.95□□□□□ -0.18
CDC42-IT1-201ENST00000431803 PLEKHH1Q9ULM0 1364 aa13.95□□□□□ -0.18
CDC42-IT1-201ENST00000431803 PXDNQ92626 1479 aa13.94□□□□□ -0.18
CDC42-IT1-201ENST00000431803 C14orf93Q9H972 538 aaKnown RBP13.94□□□□□ -0.18
CDC42-IT1-201ENST00000431803 NPHP3Q7Z494 1330 aa13.93□□□□□ -0.18
CDC42-IT1-201ENST00000431803 RXRBP28702 533 aa13.93□□□□□ -0.18
CDC42-IT1-201ENST00000431803 C8orf37Q96NL8 207 aa13.93□□□□□ -0.18
CDC42-IT1-201ENST00000431803 FMN2Q9NZ56 1722 aa13.93□□□□□ -0.18
CDC42-IT1-201ENST00000431803 ESCO1Q5FWF5 840 aa13.92□□□□□ -0.18
CDC42-IT1-201ENST00000431803 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
CDC42-IT1-201ENST00000431803 ADAMTS2O95450 1211 aa13.9□□□□□ -0.18
CDC42-IT1-201ENST00000431803 CFAP70Q5T0N1 1121 aa13.9□□□□□ -0.18
CDC42-IT1-201ENST00000431803 FARP1Q9Y4F1 1045 aaPredicted RBP13.9□□□□□ -0.18
CDC42-IT1-201ENST00000431803 KIF1AQ12756 1690 aa13.89□□□□□ -0.19
CDC42-IT1-201ENST00000431803 ADGRB1O14514 1584 aa13.89□□□□□ -0.19
CDC42-IT1-201ENST00000431803 FOXO3O43524 673 aa13.89□□□□□ -0.19
CDC42-IT1-201ENST00000431803 DLC1Q96QB1 1528 aa13.89□□□□□ -0.19
CDC42-IT1-201ENST00000431803 RGS12O14924 1447 aa13.89□□□□□ -0.19
CDC42-IT1-201ENST00000431803 DHX57Q6P158 1386 aaKnown RBP13.88□□□□□ -0.19
CDC42-IT1-201ENST00000431803 HRCP23327 699 aa13.88□□□□□ -0.19
CDC42-IT1-201ENST00000431803 NGLY1Q96IV0 654 aa13.88□□□□□ -0.19
CDC42-IT1-201ENST00000431803 NUTM2FA1L443 756 aa13.87□□□□□ -0.19
CDC42-IT1-201ENST00000431803 RBM6P78332 1123 aaKnown RBP13.87□□□□□ -0.19
CDC42-IT1-201ENST00000431803 FNBP4Q8N3X1 1017 aaPredicted RBP13.87□□□□□ -0.19
CDC42-IT1-201ENST00000431803 UPF1Q92900 1129 aaKnown RBP eCLIP13.87□□□□□ -0.19
CDC42-IT1-201ENST00000431803 QTRT2Q9H974 415 aaKnown RBP13.87□□□□□ -0.19
CDC42-IT1-201ENST00000431803 XPCQ01831 940 aaPredicted RBP13.86□□□□□ -0.19
CDC42-IT1-201ENST00000431803 ADGRB2O60241 1585 aa13.86□□□□□ -0.19
CDC42-IT1-201ENST00000431803 EP400Q96L91 3159 aa13.85□□□□□ -0.19
CDC42-IT1-201ENST00000431803 PRAM1Q96QH2 718 aa13.85□□□□□ -0.19
CDC42-IT1-201ENST00000431803 MARF1Q9Y4F3 1742 aaKnown RBP13.84□□□□□ -0.19
CDC42-IT1-201ENST00000431803 ATRNO75882 1429 aa13.84□□□□□ -0.19
CDC42-IT1-201ENST00000431803 C19orf67A6NJJ6 358 aa13.84□□□□□ -0.19
CDC42-IT1-201ENST00000431803 USP21Q9UK80 565 aa13.84□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms