RNA–Protein interactions for RNA: ENST00000431540.7

CDH13-203, Transcript of cadherin 13, humanhuman

TSL 1 (best) BASIC

Gene CDH13, Length 831 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-203ENST00000431540 PHF12Q96QT6 1004 aa12.75□□□□□ -0.37
CDH13-203ENST00000431540 E9PCH4 1651 aa12.74□□□□□ -0.37
CDH13-203ENST00000431540 PPP1R15AO75807 674 aaPredicted RBP12.74□□□□□ -0.37
CDH13-203ENST00000431540 POTEJP0CG39 1038 aa12.74□□□□□ -0.37
CDH13-203ENST00000431540 PAK3O75914 559 aaPredicted RBP12.73□□□□□ -0.37
CDH13-203ENST00000431540 FAM50AQ14320 339 aaKnown RBP12.73□□□□□ -0.37
CDH13-203ENST00000431540 MAMSTRQ6ZN01 415 aa12.72□□□□□ -0.37
CDH13-203ENST00000431540 METRNQ9UJH8 293 aa12.72□□□□□ -0.37
CDH13-203ENST00000431540 DCCP43146 1447 aa12.71□□□□□ -0.37
CDH13-203ENST00000431540 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.71□□□□□ -0.37
CDH13-203ENST00000431540 TRPM2O94759 1503 aa12.71□□□□□ -0.38
CDH13-203ENST00000431540 ATF3P18847 181 aa12.7□□□□□ -0.38
CDH13-203ENST00000431540 ZNF772Q68DY9 489 aaPredicted RBP12.7□□□□□ -0.38
CDH13-203ENST00000431540 SHPRHQ149N8 1683 aa12.7□□□□□ -0.38
CDH13-203ENST00000431540 ADAMTS13Q76LX8 1427 aa12.7□□□□□ -0.38
CDH13-203ENST00000431540 COL16A1Q07092 1604 aaPredicted RBP12.7□□□□□ -0.38
CDH13-203ENST00000431540 AHDC1Q5TGY3 1603 aaPredicted RBP12.7□□□□□ -0.38
CDH13-203ENST00000431540 POTEAQ6S8J7 498 aa12.69□□□□□ -0.38
CDH13-203ENST00000431540 C7P10643 843 aa12.68□□□□□ -0.38
CDH13-203ENST00000431540 ASTLQ6HA08 431 aaPredicted RBP12.68□□□□□ -0.38
CDH13-203ENST00000431540 SLC39A7Q92504 469 aa12.68□□□□□ -0.38
CDH13-203ENST00000431540 FAM163AQ96GL9 167 aaPredicted RBP12.68□□□□□ -0.38
CDH13-203ENST00000431540 NUP155O75694 1391 aa12.67□□□□□ -0.38
CDH13-203ENST00000431540 SETBP1Q9Y6X0 1596 aa12.66□□□□□ -0.38
CDH13-203ENST00000431540 AMOTL2Q9Y2J4 779 aa12.66□□□□□ -0.38
CDH13-203ENST00000431540 SPHKAPQ2M3C7 1700 aa12.65□□□□□ -0.38
CDH13-203ENST00000431540 KIF1BO60333 1816 aa12.65□□□□□ -0.39
CDH13-203ENST00000431540 CHGAP10645 457 aaKnown RBP12.64□□□□□ -0.39
CDH13-203ENST00000431540 C14orf37Q86TY3 774 aa12.64□□□□□ -0.39
CDH13-203ENST00000431540 CDK12Q9NYV4 1490 aaPredicted RBP12.64□□□□□ -0.39
CDH13-203ENST00000431540 LRRC59Q96AG4 307 aaKnown RBP12.63□□□□□ -0.39
CDH13-203ENST00000431540 RBM33Q96EV2 1170 aaKnown RBP12.63□□□□□ -0.39
CDH13-203ENST00000431540 SETD5Q9C0A6 1442 aa12.62□□□□□ -0.39
CDH13-203ENST00000431540 XRN1Q8IZH2 1706 aaKnown RBP12.62□□□□□ -0.39
CDH13-203ENST00000431540 ATMINO43313 823 aaPredicted RBP12.62□□□□□ -0.39
CDH13-203ENST00000431540 SETD1AO15047 1707 aaKnown RBP12.62□□□□□ -0.39
CDH13-203ENST00000431540 NHSL1Q5SYE7 1610 aa12.61□□□□□ -0.39
CDH13-203ENST00000431540 RPGRIP1LQ68CZ1 1315 aa12.61□□□□□ -0.39
CDH13-203ENST00000431540 NRXN3Q9Y4C0 1643 aa12.6□□□□□ -0.39
CDH13-203ENST00000431540 VGFO15240 615 aaPredicted RBP12.6□□□□□ -0.39
CDH13-203ENST00000431540 BRINP3Q76B58 766 aa12.6□□□□□ -0.39
CDH13-203ENST00000431540 ACIN1Q9UKV3 1341 aaKnown RBP12.6□□□□□ -0.39
CDH13-203ENST00000431540 LAMC1P11047 1609 aa12.59□□□□□ -0.39
CDH13-203ENST00000431540 SCUBE2Q9NQ36 999 aa12.59□□□□□ -0.39
CDH13-203ENST00000431540 PTPRUQ92729 1446 aa12.59□□□□□ -0.39
CDH13-203ENST00000431540 RXRBP28702 533 aa12.58□□□□□ -0.4
CDH13-203ENST00000431540 MEX3CQ5U5Q3 659 aaKnown RBP12.58□□□□□ -0.4
CDH13-203ENST00000431540 PRAG1Q86YV5 1406 aa12.58□□□□□ -0.4
CDH13-203ENST00000431540 MST1RQ04912 1400 aa12.57□□□□□ -0.4
CDH13-203ENST00000431540 ADGRL3Q9HAR2 1447 aa12.56□□□□□ -0.4
CDH13-203ENST00000431540 ZNF326Q5BKZ1 582 aaKnown RBP12.56□□□□□ -0.4
CDH13-203ENST00000431540 MS4A3Q96HJ5 214 aa12.56□□□□□ -0.4
CDH13-203ENST00000431540 ASXL1Q8IXJ9 1541 aa12.56□□□□□ -0.4
CDH13-203ENST00000431540 LRP6O75581 1613 aa12.55□□□□□ -0.4
CDH13-203ENST00000431540 NUTM2DQ5VT03 806 aaPredicted RBP12.55□□□□□ -0.4
CDH13-203ENST00000431540 UPF1Q92900 1129 aaKnown RBP eCLIP12.55□□□□□ -0.4
CDH13-203ENST00000431540 NEXMIFQ5QGS0 1516 aa12.54□□□□□ -0.4
CDH13-203ENST00000431540 METP08581 1390 aa12.54□□□□□ -0.4
CDH13-203ENST00000431540 PTCH1Q13635 1447 aa12.54□□□□□ -0.4
CDH13-203ENST00000431540 RRBP1Q9P2E9 1410 aaKnown RBP12.54□□□□□ -0.4
CDH13-203ENST00000431540 RBM6P78332 1123 aaKnown RBP12.53□□□□□ -0.4
CDH13-203ENST00000431540 NGLY1Q96IV0 654 aa12.52□□□□□ -0.41
CDH13-203ENST00000431540 CLTCL1P53675 1640 aa12.51□□□□□ -0.41
CDH13-203ENST00000431540 SOS2Q07890 1332 aaPredicted RBP12.51□□□□□ -0.41
CDH13-203ENST00000431540 HFM1A2PYH4 1435 aa12.51□□□□□ -0.41
CDH13-203ENST00000431540 NALCNQ8IZF0 1738 aa12.51□□□□□ -0.41
CDH13-203ENST00000431540 QTRT2Q9H974 415 aaKnown RBP12.5□□□□□ -0.41
CDH13-203ENST00000431540 AFF2P51816 1311 aa12.5□□□□□ -0.41
CDH13-203ENST00000431540 NAIPQ13075 1403 aa12.5□□□□□ -0.41
CDH13-203ENST00000431540 PPLO60437 1756 aa12.5□□□□□ -0.41
CDH13-203ENST00000431540 C1orf167Q5SNV9 1468 aa12.49□□□□□ -0.41
CDH13-203ENST00000431540 PNPLA6Q8IY17 1366 aa12.49□□□□□ -0.41
CDH13-203ENST00000431540 CDAN1Q8IWY9 1227 aa12.49□□□□□ -0.41
CDH13-203ENST00000431540 ITGAEP38570 1179 aa12.48□□□□□ -0.41
CDH13-203ENST00000431540 MNX1P50219 401 aaPredicted RBP12.48□□□□□ -0.41
CDH13-203ENST00000431540 CCDC125Q86Z20 511 aa12.48□□□□□ -0.41
CDH13-203ENST00000431540 FNBP4Q8N3X1 1017 aaPredicted RBP12.48□□□□□ -0.41
CDH13-203ENST00000431540 COL22A1Q8NFW1 1626 aaPredicted RBP12.48□□□□□ -0.41
CDH13-203ENST00000431540 SIRT1Q96EB6 747 aa12.47□□□□□ -0.41
CDH13-203ENST00000431540 LRPPRCP42704 1394 aaKnown RBP12.46□□□□□ -0.41
CDH13-203ENST00000431540 NUTM2BA6NNL0 878 aaPredicted RBP12.46□□□□□ -0.41
CDH13-203ENST00000431540 NUTM2EB1AL46 878 aaPredicted RBP12.46□□□□□ -0.41
CDH13-203ENST00000431540 NUTM2AQ8IVF1 878 aaPredicted RBP12.46□□□□□ -0.41
CDH13-203ENST00000431540 TRIM52Q96A61 297 aa12.46□□□□□ -0.41
CDH13-203ENST00000431540 MARF1Q9Y4F3 1742 aaKnown RBP12.45□□□□□ -0.42
CDH13-203ENST00000431540 NPHP3Q7Z494 1330 aa12.45□□□□□ -0.42
CDH13-203ENST00000431540 TRPC5Q9UL62 973 aaPredicted RBP12.45□□□□□ -0.42
CDH13-203ENST00000431540 ANKRD30BQ9BXX2 1392 aa12.44□□□□□ -0.42
CDH13-203ENST00000431540 ATN1P54259 1190 aaPredicted RBP12.44□□□□□ -0.42
CDH13-203ENST00000431540 TECPR2O15040 1411 aa12.43□□□□□ -0.42
CDH13-203ENST00000431540 CDC42BPGQ6DT37 1551 aa12.43□□□□□ -0.42
CDH13-203ENST00000431540 ABCC11Q96J66 1382 aa12.43□□□□□ -0.42
CDH13-203ENST00000431540 ROBO2Q9HCK4 1378 aa12.43□□□□□ -0.42
CDH13-203ENST00000431540 C8orf37Q96NL8 207 aa12.42□□□□□ -0.42
CDH13-203ENST00000431540 POTEFA5A3E0 1075 aa12.41□□□□□ -0.42
CDH13-203ENST00000431540 KNDC1Q76NI1 1749 aa12.41□□□□□ -0.42
CDH13-203ENST00000431540 ORAI2Q96SN7 254 aa12.41□□□□□ -0.42
CDH13-203ENST00000431540 USP21Q9UK80 565 aa12.41□□□□□ -0.42
CDH13-203ENST00000431540 ATAD2Q6PL18 1390 aa12.41□□□□□ -0.42
CDH13-203ENST00000431540 IFT172Q9UG01 1749 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms