RNA–Protein interactions for RNA: ENST00000431473.3

RIMKLA-202, Transcript of ribosomal modification protein rimK like family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RIMKLA, Length 8,909 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIMKLA-202ENST00000431473 TTC5Q8N0Z6 440 aa14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 HMOX1P09601 288 aa14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 MTERF4Q7Z6M4 381 aaKnown RBP14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 RUNDC1Q96C34 613 aa14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 PKNOX2Q96KN3 472 aa14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 H0YHG0 523 aa14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 G3BP1Q13283 466 aaKnown RBP eCLIP14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 TRIM34Q9BYJ4 488 aa14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 CWC15Q9P013 229 aaKnown RBP14.14□□□□□ -0.15
RIMKLA-202ENST00000431473 DIAPH1O60610 1272 aaKnown RBP14.13□□□□□ -0.15
RIMKLA-202ENST00000431473 EPS15P42566 896 aa14.13□□□□□ -0.15
RIMKLA-202ENST00000431473 SMC2O95347 1197 aa14.13□□□□□ -0.15
RIMKLA-202ENST00000431473 CNTLNQ9NXG0 1405 aa14.13□□□□□ -0.15
RIMKLA-202ENST00000431473 NOL10Q9BSC4 688 aaKnown RBP14.13□□□□□ -0.15
RIMKLA-202ENST00000431473 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.13□□□□□ -0.15
RIMKLA-202ENST00000431473 AKNAQ7Z591 1439 aa14.13□□□□□ -0.15
RIMKLA-202ENST00000431473 RUSC2Q8N2Y8 1516 aa14.12□□□□□ -0.15
RIMKLA-202ENST00000431473 TSPY26PQ9H489 355 aa14.12□□□□□ -0.15
RIMKLA-202ENST00000431473 PRPF40AO75400 957 aaKnown RBP14.12□□□□□ -0.15
RIMKLA-202ENST00000431473 SDF4Q9BRK5 362 aa14.11□□□□□ -0.15
RIMKLA-202ENST00000431473 NINLQ9Y2I6 1382 aa14.11□□□□□ -0.15
RIMKLA-202ENST00000431473 CT47A1Q5JQC4 288 aaPredicted RBP14.11□□□□□ -0.15
RIMKLA-202ENST00000431473 CDC45O75419 566 aa14.11□□□□□ -0.15
RIMKLA-202ENST00000431473 SAFBQ15424 915 aaKnown RBP eCLIP14.1□□□□□ -0.15
RIMKLA-202ENST00000431473 ERC2O15083 957 aa14.1□□□□□ -0.15
RIMKLA-202ENST00000431473 API5Q9BZZ5 524 aaKnown RBP14.1□□□□□ -0.15
RIMKLA-202ENST00000431473 CCDC7Q96M83 1385 aa14.1□□□□□ -0.15
RIMKLA-202ENST00000431473 KIF7Q2M1P5 1343 aa14.1□□□□□ -0.15
RIMKLA-202ENST00000431473 EVA1CP58658 441 aa14.1□□□□□ -0.15
RIMKLA-202ENST00000431473 FYB1O15117 783 aa14.09□□□□□ -0.15
RIMKLA-202ENST00000431473 CEBPZQ03701 1054 aaKnown RBP14.09□□□□□ -0.15
RIMKLA-202ENST00000431473 MPNDQ8N594 471 aa14.09□□□□□ -0.15
RIMKLA-202ENST00000431473 FMNL2Q96PY5 1086 aa14.09□□□□□ -0.15
RIMKLA-202ENST00000431473 CDR1P51861 262 aa14.09□□□□□ -0.15
RIMKLA-202ENST00000431473 CCDC173Q0VFZ6 552 aa14.09□□□□□ -0.15
RIMKLA-202ENST00000431473 TSPYL4Q9UJ04 414 aa14.09□□□□□ -0.15
RIMKLA-202ENST00000431473 RDXP35241 583 aaKnown RBP14.09□□□□□ -0.15
RIMKLA-202ENST00000431473 CCDC66A2RUB6 948 aa14.08□□□□□ -0.15
RIMKLA-202ENST00000431473 ODF2Q5BJF6 829 aa14.08□□□□□ -0.16
RIMKLA-202ENST00000431473 SYTL4Q96C24 671 aaPredicted RBP14.08□□□□□ -0.16
RIMKLA-202ENST00000431473 HSP90AB2PQ58FF8 381 aa14.08□□□□□ -0.16
RIMKLA-202ENST00000431473 RALYLQ86SE5 291 aaKnown RBP14.08□□□□□ -0.16
RIMKLA-202ENST00000431473 LETM1O95202 739 aaPredicted RBP14.08□□□□□ -0.16
RIMKLA-202ENST00000431473 NEUROD6Q96NK8 337 aa14.08□□□□□ -0.16
RIMKLA-202ENST00000431473 BRPF1P55201 1214 aaPredicted RBP14.08□□□□□ -0.16
RIMKLA-202ENST00000431473 C1orf115Q9H7X2 142 aa14.08□□□□□ -0.16
RIMKLA-202ENST00000431473 DDX58O95786 925 aaKnown RBP14.07□□□□□ -0.16
RIMKLA-202ENST00000431473 CCDC43Q96MW1 224 aaKnown RBP14.07□□□□□ -0.16
RIMKLA-202ENST00000431473 AIMP1Q12904 312 aaKnown RBP14.07□□□□□ -0.16
RIMKLA-202ENST00000431473 SAMD1Q6SPF0 538 aaPredicted RBP14.07□□□□□ -0.16
RIMKLA-202ENST00000431473 CNTROBQ8N137 903 aa14.07□□□□□ -0.16
RIMKLA-202ENST00000431473 KINO60870 393 aaKnown RBP14.07□□□□□ -0.16
RIMKLA-202ENST00000431473 CDCA7LQ96GN5 454 aa14.07□□□□□ -0.16
RIMKLA-202ENST00000431473 CUX1P39880 1505 aa14.07□□□□□ -0.16
RIMKLA-202ENST00000431473 RSPH4AQ5TD94 716 aa14.06□□□□□ -0.16
RIMKLA-202ENST00000431473 FIBPO43427 364 aa14.06□□□□□ -0.16
RIMKLA-202ENST00000431473 LEKR1Q6ZMV7 388 aa14.06□□□□□ -0.16
RIMKLA-202ENST00000431473 CTDP1Q9Y5B0 961 aaPredicted RBP14.06□□□□□ -0.16
RIMKLA-202ENST00000431473 WASHC4Q2M389 1173 aa14.06□□□□□ -0.16
RIMKLA-202ENST00000431473 MTMR7Q9Y216 660 aa14.06□□□□□ -0.16
RIMKLA-202ENST00000431473 NEK4P51957 841 aa14.06□□□□□ -0.16
RIMKLA-202ENST00000431473 ZFYVE27Q5T4F4 411 aa14.06□□□□□ -0.16
RIMKLA-202ENST00000431473 PSMA5P28066 241 aa14.05□□□□□ -0.16
RIMKLA-202ENST00000431473 UQCRHLA0A096LP55 91 aa14.05□□□□□ -0.16
RIMKLA-202ENST00000431473 UQCRHP07919 91 aa14.05□□□□□ -0.16
RIMKLA-202ENST00000431473 AXDND1Q5T1B0 1012 aaPredicted RBP14.05□□□□□ -0.16
RIMKLA-202ENST00000431473 CCDC191Q8NCU4 936 aa14.05□□□□□ -0.16
RIMKLA-202ENST00000431473 ADAMTS8Q9UP79 889 aa14.05□□□□□ -0.16
RIMKLA-202ENST00000431473 DCTN1Q14203 1278 aa14.04□□□□□ -0.16
RIMKLA-202ENST00000431473 OFD1O75665 1012 aa14.04□□□□□ -0.16
RIMKLA-202ENST00000431473 PLCD4Q9BRC7 762 aa14.04□□□□□ -0.16
RIMKLA-202ENST00000431473 BRMS1Q9HCU9 246 aa14.04□□□□□ -0.16
RIMKLA-202ENST00000431473 WASHC2AQ641Q2 1341 aa14.04□□□□□ -0.16
RIMKLA-202ENST00000431473 UBTFL1P0CB47 393 aaPredicted RBP14.04□□□□□ -0.16
RIMKLA-202ENST00000431473 DHX37Q8IY37 1157 aaKnown RBP14.04□□□□□ -0.16
RIMKLA-202ENST00000431473 SMARCA4P51532 1647 aa14.03□□□□□ -0.16
RIMKLA-202ENST00000431473 VGFO15240 615 aaPredicted RBP14.03□□□□□ -0.16
RIMKLA-202ENST00000431473 ERCC4Q92889 916 aaPredicted RBP14.03□□□□□ -0.16
RIMKLA-202ENST00000431473 GNAI1P63096 354 aa14.03□□□□□ -0.16
RIMKLA-202ENST00000431473 PDS5BQ9NTI5 1447 aa14.03□□□□□ -0.16
RIMKLA-202ENST00000431473 MAPK8IP2Q13387 824 aaPredicted RBP14.03□□□□□ -0.16
RIMKLA-202ENST00000431473 RIC3Q7Z5B4 369 aa14.03□□□□□ -0.16
RIMKLA-202ENST00000431473 MBD3O95983 291 aa14.03□□□□□ -0.16
RIMKLA-202ENST00000431473 MSH5O43196 834 aa14.02□□□□□ -0.16
RIMKLA-202ENST00000431473 FAM177A1Q8N128 213 aaPredicted RBP14.02□□□□□ -0.16
RIMKLA-202ENST00000431473 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.02□□□□□ -0.16
RIMKLA-202ENST00000431473 GRPEL1Q9HAV7 217 aa14.02□□□□□ -0.17
RIMKLA-202ENST00000431473 TSPYL1Q9H0U9 437 aa14.02□□□□□ -0.17
RIMKLA-202ENST00000431473 HSP90AB3PQ58FF7 597 aa14.02□□□□□ -0.17
RIMKLA-202ENST00000431473 FSD1Q9BTV5 496 aa14.02□□□□□ -0.17
RIMKLA-202ENST00000431473 HMGN5P82970 282 aaKnown RBP14.01□□□□□ -0.17
RIMKLA-202ENST00000431473 BRD4O60885 1362 aaPredicted RBP14.01□□□□□ -0.17
RIMKLA-202ENST00000431473 HSP90AB4PQ58FF6 505 aa14.01□□□□□ -0.17
RIMKLA-202ENST00000431473 PDZRN3Q9UPQ7 1066 aa14.01□□□□□ -0.17
RIMKLA-202ENST00000431473 ATP2B1P20020 1258 aa14□□□□□ -0.17
RIMKLA-202ENST00000431473 PSME1Q06323 249 aa14□□□□□ -0.17
RIMKLA-202ENST00000431473 SMARCE1Q969G3 411 aa14□□□□□ -0.17
RIMKLA-202ENST00000431473 DNAJC2Q99543 621 aaKnown RBP14□□□□□ -0.17
RIMKLA-202ENST00000431473 NOB1Q9ULX3 412 aaKnown RBP14□□□□□ -0.17
RIMKLA-202ENST00000431473 ERICH4A6NGS2 130 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms