RNA–Protein interactions for RNA: ENST00000431146.6

USHBP1-203, Transcript of USH1 protein network component harmonin binding protein 1, humanhuman

TSL 2 BASIC

Gene USHBP1, Length 2,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USHBP1-203ENST00000431146 WAPLQ7Z5K2 1190 aa22.42■■□□□ 1.18
USHBP1-203ENST00000431146 TMEM2Q9UHN6 1383 aa22.42■■□□□ 1.18
USHBP1-203ENST00000431146 METP08581 1390 aa22.41■■□□□ 1.18
USHBP1-203ENST00000431146 DNAJC5Q9H3Z4 198 aa22.4■■□□□ 1.18
USHBP1-203ENST00000431146 SALL2Q9Y467 1007 aaPredicted RBP22.39■■□□□ 1.18
USHBP1-203ENST00000431146 PLEKHH1Q9ULM0 1364 aa22.39■■□□□ 1.17
USHBP1-203ENST00000431146 NEFLP07196 543 aa22.39■■□□□ 1.17
USHBP1-203ENST00000431146 HDGFP51858 240 aaKnown RBP22.37■■□□□ 1.17
USHBP1-203ENST00000431146 PUS7Q96PZ0 661 aaKnown RBP22.37■■□□□ 1.17
USHBP1-203ENST00000431146 NLRP1Q9C000 1473 aa22.37■■□□□ 1.17
USHBP1-203ENST00000431146 LTKP29376 864 aa22.36■■□□□ 1.17
USHBP1-203ENST00000431146 TNNT2P45379 298 aaPredicted RBP22.34■■□□□ 1.17
USHBP1-203ENST00000431146 CDK19Q9BWU1 502 aa22.34■■□□□ 1.17
USHBP1-203ENST00000431146 ANKRD36BQ8N2N9 1353 aa22.34■■□□□ 1.17
USHBP1-203ENST00000431146 DLC1Q96QB1 1528 aa22.34■■□□□ 1.17
USHBP1-203ENST00000431146 TXNDC2Q86VQ3 553 aa22.34■■□□□ 1.17
USHBP1-203ENST00000431146 ABCC11Q96J66 1382 aa22.34■■□□□ 1.17
USHBP1-203ENST00000431146 ADAMTS8Q9UP79 889 aa22.34■■□□□ 1.17
USHBP1-203ENST00000431146 IRX6P78412 446 aaPredicted RBP22.33■■□□□ 1.17
USHBP1-203ENST00000431146 A0A1W2PP64 1363 aa22.32■■□□□ 1.16
USHBP1-203ENST00000431146 MORC1Q86VD1 984 aa22.31■■□□□ 1.16
USHBP1-203ENST00000431146 BLMP54132 1417 aaPredicted RBP22.31■■□□□ 1.16
USHBP1-203ENST00000431146 ATAD2Q6PL18 1390 aa22.3■■□□□ 1.16
USHBP1-203ENST00000431146 CGNL1Q0VF96 1302 aa22.3■■□□□ 1.16
USHBP1-203ENST00000431146 WDR43Q15061 677 aaKnown RBP eCLIP22.3■■□□□ 1.16
USHBP1-203ENST00000431146 USP32Q8NFA0 1604 aa22.3■■□□□ 1.16
USHBP1-203ENST00000431146 ADAMTS13Q76LX8 1427 aa22.3■■□□□ 1.16
USHBP1-203ENST00000431146 SMG6Q86US8 1419 aaKnown RBP22.3■■□□□ 1.16
USHBP1-203ENST00000431146 RIMS1Q86UR5 1692 aaKnown RBP22.29■■□□□ 1.16
USHBP1-203ENST00000431146 NUDCQ9Y266 331 aa22.28■■□□□ 1.16
USHBP1-203ENST00000431146 SLC26A8Q96RN1 970 aa22.27■■□□□ 1.16
USHBP1-203ENST00000431146 PLEKHG1Q9ULL1 1385 aa22.27■■□□□ 1.15
USHBP1-203ENST00000431146 KNDC1Q76NI1 1749 aa22.26■■□□□ 1.15
USHBP1-203ENST00000431146 CD163L1Q9NR16 1453 aa22.26■■□□□ 1.15
USHBP1-203ENST00000431146 NINLQ9Y2I6 1382 aa22.26■■□□□ 1.15
USHBP1-203ENST00000431146 CABP1Q9NZU7 370 aa22.26■■□□□ 1.15
USHBP1-203ENST00000431146 EID1Q9Y6B2 187 aa22.26■■□□□ 1.15
USHBP1-203ENST00000431146 SLIT1O75093 1534 aa22.23■■□□□ 1.15
USHBP1-203ENST00000431146 INSRP06213 1382 aa22.23■■□□□ 1.15
USHBP1-203ENST00000431146 PRKCSHP14314 528 aaPredicted RBP22.23■■□□□ 1.15
USHBP1-203ENST00000431146 TERF2IPQ9NYB0 399 aa22.23■■□□□ 1.15
USHBP1-203ENST00000431146 CPS1P31327 1500 aa22.23■■□□□ 1.15
USHBP1-203ENST00000431146 ARHGAP23Q9P227 1491 aa22.22■■□□□ 1.15
USHBP1-203ENST00000431146 ROBO2Q9HCK4 1378 aa22.22■■□□□ 1.15
USHBP1-203ENST00000431146 TECPR2O15040 1411 aa22.22■■□□□ 1.15
USHBP1-203ENST00000431146 THEMISQ8N1K5 641 aaPredicted RBP22.21■■□□□ 1.15
USHBP1-203ENST00000431146 GGNBP2Q9H3C7 697 aa22.21■■□□□ 1.15
USHBP1-203ENST00000431146 WASLO00401 505 aaPredicted RBP22.21■■□□□ 1.15
USHBP1-203ENST00000431146 CCDC146Q8IYE0 955 aa22.21■■□□□ 1.15
USHBP1-203ENST00000431146 FAM135BQ49AJ0 1406 aa22.2■■□□□ 1.15
USHBP1-203ENST00000431146 HDGFL2Q7Z4V5 671 aaPredicted RBP22.19■■□□□ 1.14
USHBP1-203ENST00000431146 CDCA7LQ96GN5 454 aa22.19■■□□□ 1.14
USHBP1-203ENST00000431146 MED14O60244 1454 aa22.18■■□□□ 1.14
USHBP1-203ENST00000431146 PTPRUQ92729 1446 aa22.18■■□□□ 1.14
USHBP1-203ENST00000431146 NSD2O96028 1365 aa22.18■■□□□ 1.14
USHBP1-203ENST00000431146 NCKAP5LQ9HCH0 1330 aa22.18■■□□□ 1.14
USHBP1-203ENST00000431146 POLR3AO14802 1390 aaPredicted RBP22.18■■□□□ 1.14
USHBP1-203ENST00000431146 MTHFSP49914 203 aa22.18■■□□□ 1.14
USHBP1-203ENST00000431146 CEP170BQ9Y4F5 1589 aaPredicted RBP22.17■■□□□ 1.14
USHBP1-203ENST00000431146 FYB1O15117 783 aa22.16■■□□□ 1.14
USHBP1-203ENST00000431146 SIRT1Q96EB6 747 aa22.16■■□□□ 1.14
USHBP1-203ENST00000431146 SHPRHQ149N8 1683 aa22.16■■□□□ 1.14
USHBP1-203ENST00000431146 ADAMTSL3P82987 1691 aa22.15■■□□□ 1.14
USHBP1-203ENST00000431146 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.15■■□□□ 1.14
USHBP1-203ENST00000431146 PPIP5K1Q6PFW1 1433 aa22.14■■□□□ 1.14
USHBP1-203ENST00000431146 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.14■■□□□ 1.13
USHBP1-203ENST00000431146 NUDT16Q96DE0 195 aaKnown RBP22.14■■□□□ 1.13
USHBP1-203ENST00000431146 PDE3BQ13370 1112 aa22.13■■□□□ 1.13
USHBP1-203ENST00000431146 AMOTL2Q9Y2J4 779 aa22.13■■□□□ 1.13
USHBP1-203ENST00000431146 ANKRD26Q9UPS8 1709 aa22.13■■□□□ 1.13
USHBP1-203ENST00000431146 KIF20BQ96Q89 1820 aa22.12■■□□□ 1.13
USHBP1-203ENST00000431146 ATP7BP35670 1465 aa22.12■■□□□ 1.13
USHBP1-203ENST00000431146 NUTM2FA1L443 756 aa22.11■■□□□ 1.13
USHBP1-203ENST00000431146 TBX22Q9Y458 520 aa22.11■■□□□ 1.13
USHBP1-203ENST00000431146 APAF1O14727 1248 aa22.1■■□□□ 1.13
USHBP1-203ENST00000431146 PRR36Q9H6K5 1346 aa22.1■■□□□ 1.13
USHBP1-203ENST00000431146 BCL11AQ9H165 835 aa22.1■■□□□ 1.13
USHBP1-203ENST00000431146 CFAP53Q96M91 514 aa22.08■■□□□ 1.13
USHBP1-203ENST00000431146 CCDC61Q9Y6R9 512 aa22.08■■□□□ 1.13
USHBP1-203ENST00000431146 CPSF1Q10570 1443 aaKnown RBP22.07■■□□□ 1.12
USHBP1-203ENST00000431146 ADGRB2O60241 1585 aa22.06■■□□□ 1.12
USHBP1-203ENST00000431146 DIP2AQ14689 1571 aa22.05■■□□□ 1.12
USHBP1-203ENST00000431146 CDC42BPGQ6DT37 1551 aa22.05■■□□□ 1.12
USHBP1-203ENST00000431146 FBLN1P23142 703 aa22.05■■□□□ 1.12
USHBP1-203ENST00000431146 ERICH6Q7L0X2 663 aa22.05■■□□□ 1.12
USHBP1-203ENST00000431146 RNF123Q5XPI4 1314 aa22.05■■□□□ 1.12
USHBP1-203ENST00000431146 ZNF142P52746 1687 aaPredicted RBP22.04■■□□□ 1.12
USHBP1-203ENST00000431146 RCAN3Q9UKA8 241 aa22.04■■□□□ 1.12
USHBP1-203ENST00000431146 ZNF521Q96K83 1311 aa22.04■■□□□ 1.12
USHBP1-203ENST00000431146 ITSN1Q15811 1721 aa22.03■■□□□ 1.12
USHBP1-203ENST00000431146 SETD1BQ9UPS6 1966 aaKnown RBP22.03■■□□□ 1.12
USHBP1-203ENST00000431146 NME9Q86XW9 330 aa22.03■■□□□ 1.12
USHBP1-203ENST00000431146 ZRANB1Q9UGI0 708 aa22.03■■□□□ 1.12
USHBP1-203ENST00000431146 EDC4Q6P2E9 1401 aaKnown RBP22.02■■□□□ 1.12
USHBP1-203ENST00000431146 AKAP12Q02952 1782 aa22.02■■□□□ 1.12
USHBP1-203ENST00000431146 MON2Q7Z3U7 1717 aa22.01■■□□□ 1.11
USHBP1-203ENST00000431146 PTCH1Q13635 1447 aa22.01■■□□□ 1.11
USHBP1-203ENST00000431146 KCNA6P17658 529 aa22.01■■□□□ 1.11
USHBP1-203ENST00000431146 ANKLE2Q86XL3 938 aa22.01■■□□□ 1.11
USHBP1-203ENST00000431146 XRN1Q8IZH2 1706 aaKnown RBP22.01■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms