RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 LETM1O95202 739 aaPredicted RBP6.61□□□□□ -1.35
PTPN4-203ENST00000430976 ZNF853P0CG23 659 aa6.61□□□□□ -1.35
PTPN4-203ENST00000430976 ENOX2Q16206 610 aaKnown RBP6.61□□□□□ -1.35
PTPN4-203ENST00000430976 CFAP53Q96M91 514 aa6.61□□□□□ -1.35
PTPN4-203ENST00000430976 E2F5Q15329 346 aa6.6□□□□□ -1.35
PTPN4-203ENST00000430976 MSL3Q8N5Y2 521 aaKnown RBP6.6□□□□□ -1.35
PTPN4-203ENST00000430976 KCNV2Q8TDN2 545 aa6.6□□□□□ -1.35
PTPN4-203ENST00000430976 RRAGDQ9NQL2 400 aaPredicted RBP6.6□□□□□ -1.35
PTPN4-203ENST00000430976 SUGT1Q9Y2Z0 365 aa6.6□□□□□ -1.35
PTPN4-203ENST00000430976 UNC13AQ9UPW8 1703 aa6.6□□□□□ -1.35
PTPN4-203ENST00000430976 HTATSF1O43719 755 aaKnown RBP6.6□□□□□ -1.35
PTPN4-203ENST00000430976 CCDC184Q52MB2 194 aa6.6□□□□□ -1.35
PTPN4-203ENST00000430976 NUCKS1Q9H1E3 243 aaKnown RBP6.6□□□□□ -1.35
PTPN4-203ENST00000430976 IRAK4Q9NWZ3 460 aa6.6□□□□□ -1.35
PTPN4-203ENST00000430976 PUF60Q9UHX1 559 aaKnown RBP6.6□□□□□ -1.35
PTPN4-203ENST00000430976 DIS3Q9Y2L1 958 aaKnown RBP6.6□□□□□ -1.35
PTPN4-203ENST00000430976 C16orf87Q6PH81 154 aa6.6□□□□□ -1.35
PTPN4-203ENST00000430976 TMX1Q9H3N1 280 aa6.6□□□□□ -1.35
PTPN4-203ENST00000430976 NEXNQ0ZGT2 675 aa6.59□□□□□ -1.35
PTPN4-203ENST00000430976 HSP90AB2PQ58FF8 381 aa6.59□□□□□ -1.35
PTPN4-203ENST00000430976 KDM4CQ9H3R0 1056 aa6.59□□□□□ -1.35
PTPN4-203ENST00000430976 GEMIN8Q9NWZ8 242 aaKnown RBP6.59□□□□□ -1.35
PTPN4-203ENST00000430976 CA8P35219 290 aa6.59□□□□□ -1.35
PTPN4-203ENST00000430976 PRPF38AQ8NAV1 312 aaKnown RBP6.59□□□□□ -1.35
PTPN4-203ENST00000430976 TPX2Q9ULW0 747 aaKnown RBP6.59□□□□□ -1.35
PTPN4-203ENST00000430976 CCDC66A2RUB6 948 aa6.59□□□□□ -1.35
PTPN4-203ENST00000430976 CCDC189A1A4V9 331 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 HMGB1P1B2RPK0 211 aaPredicted RBP6.58□□□□□ -1.36
PTPN4-203ENST00000430976 PPP2R5AQ15172 486 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 DNAJC14Q6Y2X3 702 aaPredicted RBP6.58□□□□□ -1.36
PTPN4-203ENST00000430976 SPATA32Q96LK8 384 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 CCP110O43303 1012 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 CAPN15O75808 1086 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 NME8Q8N427 588 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 TRIML1Q8N9V2 468 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 MPHOSPH6Q99547 160 aaKnown RBP6.58□□□□□ -1.36
PTPN4-203ENST00000430976 ANAPC4Q9UJX5 808 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 CCDC172P0C7W6 258 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 DMTNQ08495 405 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 KIAA2012Q0VF49 1180 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 HDGFL1Q5TGJ6 251 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 SMC3Q9UQE7 1217 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 CBX1P83916 185 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 DDX46Q7L014 1031 aaKnown RBP6.58□□□□□ -1.36
PTPN4-203ENST00000430976 IFNLR1Q8IU57 520 aaPredicted RBP6.58□□□□□ -1.36
PTPN4-203ENST00000430976 TSPAN18Q96SJ8 248 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 CEP89Q96ST8 783 aa6.58□□□□□ -1.36
PTPN4-203ENST00000430976 CCDC175P0C221 793 aa6.57□□□□□ -1.36
PTPN4-203ENST00000430976 GIMAP6Q6P9H5 292 aa6.57□□□□□ -1.36
PTPN4-203ENST00000430976 PPP4R3CPQ6ZMV5 832 aa6.57□□□□□ -1.36
PTPN4-203ENST00000430976 NOL10Q9BSC4 688 aaKnown RBP6.57□□□□□ -1.36
PTPN4-203ENST00000430976 SMC4Q9NTJ3 1288 aa6.57□□□□□ -1.36
PTPN4-203ENST00000430976 CENPJQ9HC77 1338 aaPredicted RBP6.57□□□□□ -1.36
PTPN4-203ENST00000430976 SMAPO00193 183 aa6.57□□□□□ -1.36
PTPN4-203ENST00000430976 CCT2P78371 535 aaKnown RBP6.57□□□□□ -1.36
PTPN4-203ENST00000430976 KIAA1211Q6ZU35 1233 aa6.57□□□□□ -1.36
PTPN4-203ENST00000430976 FAM212AQ96EL1 285 aa6.57□□□□□ -1.36
PTPN4-203ENST00000430976 CHMP3Q9Y3E7 222 aa6.57□□□□□ -1.36
PTPN4-203ENST00000430976 IPO7O95373 1038 aaKnown RBP6.56□□□□□ -1.36
PTPN4-203ENST00000430976 ABL2P42684 1182 aa6.56□□□□□ -1.36
PTPN4-203ENST00000430976 TTC30AQ86WT1 665 aa6.56□□□□□ -1.36
PTPN4-203ENST00000430976 UPF2Q9HAU5 1272 aaKnown RBP6.56□□□□□ -1.36
PTPN4-203ENST00000430976 CADPSQ9ULU8 1353 aa6.56□□□□□ -1.36
PTPN4-203ENST00000430976 MTERF4Q7Z6M4 381 aaKnown RBP6.56□□□□□ -1.36
PTPN4-203ENST00000430976 RBM5P52756 815 aaKnown RBP eCLIP6.56□□□□□ -1.36
PTPN4-203ENST00000430976 UTP14CQ5TAP6 766 aaKnown RBP6.56□□□□□ -1.36
PTPN4-203ENST00000430976 GOLGA6L2Q8N9W4 650 aaPredicted RBP6.56□□□□□ -1.36
PTPN4-203ENST00000430976 RAI14Q9P0K7 980 aa6.56□□□□□ -1.36
PTPN4-203ENST00000430976 UNCXA6NJT0 531 aa6.55□□□□□ -1.36
PTPN4-203ENST00000430976 PPFIA4O75335 1185 aa6.55□□□□□ -1.36
PTPN4-203ENST00000430976 ZRANB2O95218 330 aaKnown RBP eCLIP6.55□□□□□ -1.36
PTPN4-203ENST00000430976 IRX5P78411 483 aaPredicted RBP6.55□□□□□ -1.36
PTPN4-203ENST00000430976 CCDC70Q6NSX1 233 aa6.55□□□□□ -1.36
PTPN4-203ENST00000430976 RABL2BQ9UNT1 228 aa6.55□□□□□ -1.36
PTPN4-203ENST00000430976 ELL2O00472 640 aaPredicted RBP6.55□□□□□ -1.36
PTPN4-203ENST00000430976 NPHP1O15259 732 aa6.55□□□□□ -1.36
PTPN4-203ENST00000430976 SIRT1Q96EB6 747 aa6.55□□□□□ -1.36
PTPN4-203ENST00000430976 V9GYY5 206 aaPredicted RBP6.55□□□□□ -1.36
PTPN4-203ENST00000430976 SETSIPP0DME0 302 aa6.55□□□□□ -1.36
PTPN4-203ENST00000430976 DCAF11Q8TEB1 546 aa6.55□□□□□ -1.36
PTPN4-203ENST00000430976 ARHGEF1Q92888 912 aaKnown RBP6.55□□□□□ -1.36
PTPN4-203ENST00000430976 GTPBP4Q9BZE4 634 aaKnown RBP6.55□□□□□ -1.36
PTPN4-203ENST00000430976 USP25Q9UHP3 1055 aa6.55□□□□□ -1.36
PTPN4-203ENST00000430976 VASPP50552 380 aaPredicted RBP6.54□□□□□ -1.36
PTPN4-203ENST00000430976 LMBRD2Q68DH5 695 aaPredicted RBP6.54□□□□□ -1.36
PTPN4-203ENST00000430976 NBPF10Q6P3W6 841 aaKnown RBP6.54□□□□□ -1.36
PTPN4-203ENST00000430976 GOLGA6L3A6NEY3 463 aa6.54□□□□□ -1.36
PTPN4-203ENST00000430976 RFX1P22670 979 aa6.54□□□□□ -1.36
PTPN4-203ENST00000430976 SLC4A3P48751 1232 aa6.54□□□□□ -1.36
PTPN4-203ENST00000430976 CSPP1Q1MSJ5 1256 aa6.54□□□□□ -1.36
PTPN4-203ENST00000430976 CPSF2Q9P2I0 782 aaKnown RBP6.54□□□□□ -1.36
PTPN4-203ENST00000430976 WASHC2CQ9Y4E1 1318 aa6.54□□□□□ -1.36
PTPN4-203ENST00000430976 TAX1BP1Q86VP1 789 aa6.54□□□□□ -1.36
PTPN4-203ENST00000430976 PMM1Q92871 262 aa6.54□□□□□ -1.36
PTPN4-203ENST00000430976 TSPYL1Q9H0U9 437 aa6.54□□□□□ -1.36
PTPN4-203ENST00000430976 ZKSCAN8Q15776 578 aaPredicted RBP6.54□□□□□ -1.36
PTPN4-203ENST00000430976 CT47A1Q5JQC4 288 aaPredicted RBP6.54□□□□□ -1.36
PTPN4-203ENST00000430976 TIGD1Q96MW7 591 aa6.54□□□□□ -1.36
PTPN4-203ENST00000430976 RPS6KL1Q9Y6S9 549 aa6.54□□□□□ -1.36
PTPN4-203ENST00000430976 CAND2O75155 1236 aa6.53□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms