RNA–Protein interactions for RNA: ENST00000430617.6

ATG4B-212, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 623 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-212ENST00000430617 ADGRL2O95490 1459 aa15.61■□□□□ 0.09
ATG4B-212ENST00000430617 PLCH1Q4KWH8 1693 aa15.6■□□□□ 0.09
ATG4B-212ENST00000430617 SF3B2Q13435 895 aaKnown RBP15.6■□□□□ 0.09
ATG4B-212ENST00000430617 RGPD1P0DJD0 1748 aa15.6■□□□□ 0.09
ATG4B-212ENST00000430617 PXDNQ92626 1479 aa15.59■□□□□ 0.09
ATG4B-212ENST00000430617 SLIT2O94813 1529 aa15.59■□□□□ 0.09
ATG4B-212ENST00000430617 ANKRD50Q9ULJ7 1429 aa15.59■□□□□ 0.09
ATG4B-212ENST00000430617 YY1P25490 414 aa15.58■□□□□ 0.08
ATG4B-212ENST00000430617 USP32Q8NFA0 1604 aa15.57■□□□□ 0.08
ATG4B-212ENST00000430617 TNS1Q9HBL0 1735 aaKnown RBP15.57■□□□□ 0.08
ATG4B-212ENST00000430617 NWD2Q9ULI1 1742 aa15.57■□□□□ 0.08
ATG4B-212ENST00000430617 UNC5CLQ8IV45 518 aa15.56■□□□□ 0.08
ATG4B-212ENST00000430617 SEPT12Q8IYM1 358 aa15.56■□□□□ 0.08
ATG4B-212ENST00000430617 NEXMIFQ5QGS0 1516 aa15.54■□□□□ 0.08
ATG4B-212ENST00000430617 XPCQ01831 940 aaPredicted RBP15.54■□□□□ 0.08
ATG4B-212ENST00000430617 ABCA3Q99758 1704 aa15.54■□□□□ 0.08
ATG4B-212ENST00000430617 ROBO2Q9HCK4 1378 aa15.53■□□□□ 0.08
ATG4B-212ENST00000430617 R3HDM1Q15032 1099 aaKnown RBP15.53■□□□□ 0.08
ATG4B-212ENST00000430617 KIF1BO60333 1816 aa15.52■□□□□ 0.08
ATG4B-212ENST00000430617 RGPD8O14715 1765 aaPredicted RBP15.52■□□□□ 0.08
ATG4B-212ENST00000430617 BAG6P46379 1132 aa15.51■□□□□ 0.07
ATG4B-212ENST00000430617 KRT27Q7Z3Y8 459 aa15.51■□□□□ 0.07
ATG4B-212ENST00000430617 CAMTA1Q9Y6Y1 1673 aa15.51■□□□□ 0.07
ATG4B-212ENST00000430617 EN1Q05925 392 aaPredicted RBP15.5■□□□□ 0.07
ATG4B-212ENST00000430617 NPHP3Q7Z494 1330 aa15.49■□□□□ 0.07
ATG4B-212ENST00000430617 NRAPQ86VF7 1730 aa15.49■□□□□ 0.07
ATG4B-212ENST00000430617 ONECUT3O60422 494 aaPredicted RBP15.49■□□□□ 0.07
ATG4B-212ENST00000430617 CDC42BPGQ6DT37 1551 aa15.49■□□□□ 0.07
ATG4B-212ENST00000430617 CLTCL1P53675 1640 aa15.48■□□□□ 0.07
ATG4B-212ENST00000430617 FOXO3O43524 673 aa15.48■□□□□ 0.07
ATG4B-212ENST00000430617 ESCO1Q5FWF5 840 aa15.48■□□□□ 0.07
ATG4B-212ENST00000430617 ZNF326Q5BKZ1 582 aaKnown RBP15.47■□□□□ 0.07
ATG4B-212ENST00000430617 VPS72Q15906 364 aa15.46■□□□□ 0.07
ATG4B-212ENST00000430617 RREB1Q92766 1687 aa15.45■□□□□ 0.06
ATG4B-212ENST00000430617 NUP188Q5SRE5 1749 aa15.45■□□□□ 0.06
ATG4B-212ENST00000430617 UTRNP46939 3433 aa15.44■□□□□ 0.06
ATG4B-212ENST00000430617 PRAG1Q86YV5 1406 aa15.43■□□□□ 0.06
ATG4B-212ENST00000430617 FMN2Q9NZ56 1722 aa15.43■□□□□ 0.06
ATG4B-212ENST00000430617 FAM182BQ5T319 152 aa15.43■□□□□ 0.06
ATG4B-212ENST00000430617 KIF1AQ12756 1690 aa15.43■□□□□ 0.06
ATG4B-212ENST00000430617 IFFO2Q5TF58 517 aa15.42■□□□□ 0.06
ATG4B-212ENST00000430617 CCDC9Q9Y3X0 531 aaKnown RBP15.42■□□□□ 0.06
ATG4B-212ENST00000430617 DISP2A7MBM2 1401 aa15.42■□□□□ 0.06
ATG4B-212ENST00000430617 SPATA31A3Q5VYP0 1347 aa15.42■□□□□ 0.06
ATG4B-212ENST00000430617 PPLO60437 1756 aa15.41■□□□□ 0.06
ATG4B-212ENST00000430617 CHD4Q14839 1912 aa15.41■□□□□ 0.06
ATG4B-212ENST00000430617 EZH2Q15910 746 aaKnown RBP15.41■□□□□ 0.06
ATG4B-212ENST00000430617 HFM1A2PYH4 1435 aa15.41■□□□□ 0.06
ATG4B-212ENST00000430617 NUTM2FA1L443 756 aa15.4■□□□□ 0.06
ATG4B-212ENST00000430617 CABLES1Q8TDN4 633 aa15.4■□□□□ 0.06
ATG4B-212ENST00000430617 NUP155O75694 1391 aa15.39■□□□□ 0.05
ATG4B-212ENST00000430617 THSD7AQ9UPZ6 1657 aa15.39■□□□□ 0.05
ATG4B-212ENST00000430617 FAM50AQ14320 339 aaKnown RBP15.39■□□□□ 0.05
ATG4B-212ENST00000430617 IFT172Q9UG01 1749 aa15.39■□□□□ 0.05
ATG4B-212ENST00000430617 LRPPRCP42704 1394 aaKnown RBP15.38■□□□□ 0.05
ATG4B-212ENST00000430617 A0A0G2JS52 829 aa15.38■□□□□ 0.05
ATG4B-212ENST00000430617 MYT1Q01538 1121 aa15.38■□□□□ 0.05
ATG4B-212ENST00000430617 FAM98CQ17RN3 349 aaKnown RBP15.38■□□□□ 0.05
ATG4B-212ENST00000430617 NAIPQ13075 1403 aa15.37■□□□□ 0.05
ATG4B-212ENST00000430617 PLEKHG5O94827 1062 aa15.37■□□□□ 0.05
ATG4B-212ENST00000430617 ADGRB2O60241 1585 aa15.36■□□□□ 0.05
ATG4B-212ENST00000430617 CAMKK2Q96RR4 588 aa15.36■□□□□ 0.05
ATG4B-212ENST00000430617 CCDC144AA2RUR9 1427 aa15.34■□□□□ 0.05
ATG4B-212ENST00000430617 FAM83GA6ND36 823 aa15.34■□□□□ 0.05
ATG4B-212ENST00000430617 COL14A1Q05707 1796 aaKnown RBP15.34■□□□□ 0.05
ATG4B-212ENST00000430617 TNS3Q68CZ2 1445 aa15.34■□□□□ 0.05
ATG4B-212ENST00000430617 SENP3-EIF4A1A0A087X0R7 540 aa15.33■□□□□ 0.04
ATG4B-212ENST00000430617 HAP1P54257 671 aaPredicted RBP15.33■□□□□ 0.04
ATG4B-212ENST00000430617 KRT28Q7Z3Y7 464 aa15.33■□□□□ 0.04
ATG4B-212ENST00000430617 KNDC1Q76NI1 1749 aa15.33■□□□□ 0.04
ATG4B-212ENST00000430617 ZNF784Q8NCA9 323 aaPredicted RBP15.32■□□□□ 0.04
ATG4B-212ENST00000430617 CRYBG1Q9Y4K1 1723 aa15.31■□□□□ 0.04
ATG4B-212ENST00000430617 WAPLQ7Z5K2 1190 aa15.3■□□□□ 0.04
ATG4B-212ENST00000430617 TRPM3Q9HCF6 1732 aaPredicted RBP15.3■□□□□ 0.04
ATG4B-212ENST00000430617 CEP350Q5VT06 3117 aa15.3■□□□□ 0.04
ATG4B-212ENST00000430617 ROCK1Q13464 1354 aa15.29■□□□□ 0.04
ATG4B-212ENST00000430617 NINLQ9Y2I6 1382 aa15.29■□□□□ 0.04
ATG4B-212ENST00000430617 TRIM37O94972 964 aa15.29■□□□□ 0.04
ATG4B-212ENST00000430617 APLP2Q06481 763 aa15.29■□□□□ 0.04
ATG4B-212ENST00000430617 CASZ1Q86V15 1759 aa15.29■□□□□ 0.04
ATG4B-212ENST00000430617 ALS2Q96Q42 1657 aa15.28■□□□□ 0.04
ATG4B-212ENST00000430617 PLEKHH1Q9ULM0 1364 aa15.28■□□□□ 0.04
ATG4B-212ENST00000430617 VGFO15240 615 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-212ENST00000430617 BTG4Q9NY30 223 aa15.28■□□□□ 0.04
ATG4B-212ENST00000430617 PPP1R1BQ9UD71 204 aaPredicted RBP15.28■□□□□ 0.04
ATG4B-212ENST00000430617 MYOM1P52179 1685 aa15.28■□□□□ 0.04
ATG4B-212ENST00000430617 DCAF8L1A6NGE4 600 aa15.26■□□□□ 0.03
ATG4B-212ENST00000430617 APBA3O96018 575 aa15.26■□□□□ 0.03
ATG4B-212ENST00000430617 SPON1Q9HCB6 807 aa15.26■□□□□ 0.03
ATG4B-212ENST00000430617 NRKQ7Z2Y5 1582 aa15.26■□□□□ 0.03
ATG4B-212ENST00000430617 PARD3Q8TEW0 1356 aa15.25■□□□□ 0.03
ATG4B-212ENST00000430617 SPATA31A5Q5VU36 1347 aa15.25■□□□□ 0.03
ATG4B-212ENST00000430617 SPATA31A7Q8IWB4 1347 aa15.25■□□□□ 0.03
ATG4B-212ENST00000430617 SBF2Q86WG5 1849 aa15.25■□□□□ 0.03
ATG4B-212ENST00000430617 KCNQ2O43526 872 aa15.25■□□□□ 0.03
ATG4B-212ENST00000430617 LMOD2Q6P5Q4 547 aa15.25■□□□□ 0.03
ATG4B-212ENST00000430617 TECPR2O15040 1411 aa15.25■□□□□ 0.03
ATG4B-212ENST00000430617 C1QTNF8P60827 252 aa15.24■□□□□ 0.03
ATG4B-212ENST00000430617 STK26Q9P289 416 aa15.24■□□□□ 0.03
ATG4B-212ENST00000430617 NRXN1Q9ULB1 1477 aa15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms