RNA–Protein interactions for RNA: ENST00000430321.5

UBR3-204, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 5,411 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-204ENST00000430321 CABP4P57796 275 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 ZKSCAN2Q63HK3 967 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 SLC4A10Q6U841 1118 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 RIC3Q7Z5B4 369 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 ANKRD20A12PQ8NF67 263 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 L3MBTL2Q969R5 705 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 TPM1P09493 284 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 KANK4Q5T7N3 995 aaPredicted RBP7.23□□□□□ -1.25
UBR3-204ENST00000430321 RUNDC1Q96C34 613 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 USP47Q96K76 1375 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 THOC2Q8NI27 1593 aaKnown RBP7.23□□□□□ -1.25
UBR3-204ENST00000430321 ZKSCAN1P17029 563 aaPredicted RBP7.23□□□□□ -1.25
UBR3-204ENST00000430321 TSR1Q2NL82 804 aaKnown RBP7.23□□□□□ -1.25
UBR3-204ENST00000430321 NUTM2DQ5VT03 806 aaPredicted RBP7.23□□□□□ -1.25
UBR3-204ENST00000430321 STARD3NLO95772 234 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 DIAPH3Q9NSV4 1193 aa7.23□□□□□ -1.25
UBR3-204ENST00000430321 ZNF287Q9HBT7 754 aa7.22□□□□□ -1.25
UBR3-204ENST00000430321 DDX19BQ9UMR2 479 aa7.22□□□□□ -1.25
UBR3-204ENST00000430321 CFAP74Q9C0B2 1584 aa7.22□□□□□ -1.25
UBR3-204ENST00000430321 RDXP35241 583 aaKnown RBP7.22□□□□□ -1.25
UBR3-204ENST00000430321 AMOTQ4VCS5 1084 aa7.22□□□□□ -1.25
UBR3-204ENST00000430321 DDX24Q9GZR7 859 aaKnown RBP eCLIP7.22□□□□□ -1.251e-6■■■■■ 33.2
UBR3-204ENST00000430321 CT47B1P0C2W7 299 aaPredicted RBP7.22□□□□□ -1.25
UBR3-204ENST00000430321 PPP4R3BQ5MIZ7 849 aa7.22□□□□□ -1.25
UBR3-204ENST00000430321 TSPYL4Q9UJ04 414 aa7.22□□□□□ -1.25
UBR3-204ENST00000430321 TNRQ92752 1358 aa7.22□□□□□ -1.25
UBR3-204ENST00000430321 GNAI3P08754 354 aa7.22□□□□□ -1.25
UBR3-204ENST00000430321 SAFBQ15424 915 aaKnown RBP eCLIP7.22□□□□□ -1.25
UBR3-204ENST00000430321 MPHOSPH6Q99547 160 aaKnown RBP7.22□□□□□ -1.25
UBR3-204ENST00000430321 CDCA7Q9BWT1 371 aaPredicted RBP7.22□□□□□ -1.25
UBR3-204ENST00000430321 NUTM2BA6NNL0 878 aaPredicted RBP7.21□□□□□ -1.25
UBR3-204ENST00000430321 NUTM2EB1AL46 878 aaPredicted RBP7.21□□□□□ -1.25
UBR3-204ENST00000430321 PIP4K2BP78356 416 aa7.21□□□□□ -1.25
UBR3-204ENST00000430321 NUTM2AQ8IVF1 878 aaPredicted RBP7.21□□□□□ -1.25
UBR3-204ENST00000430321 RCAN3Q9UKA8 241 aa7.21□□□□□ -1.25
UBR3-204ENST00000430321 KIAA1107Q9UPP5 1409 aa7.21□□□□□ -1.26
UBR3-204ENST00000430321 PRM3Q9NNZ6 103 aa7.21□□□□□ -1.26
UBR3-204ENST00000430321 REC8O95072 547 aa7.21□□□□□ -1.26
UBR3-204ENST00000430321 TPM3P06753 285 aa7.21□□□□□ -1.26
UBR3-204ENST00000430321 SMARCC1Q92922 1105 aaPredicted RBP7.21□□□□□ -1.26
UBR3-204ENST00000430321 BICRAQ9NZM4 1560 aa7.21□□□□□ -1.26
UBR3-204ENST00000430321 NUTM2FA1L443 756 aa7.2□□□□□ -1.26
UBR3-204ENST00000430321 POLD1P28340 1107 aa7.2□□□□□ -1.26
UBR3-204ENST00000430321 NOC3LQ8WTT2 800 aaKnown RBP7.2□□□□□ -1.26
UBR3-204ENST00000430321 ERBINQ96RT1 1412 aa7.2□□□□□ -1.26
UBR3-204ENST00000430321 SF3A1Q15459 793 aaKnown RBP7.2□□□□□ -1.26
UBR3-204ENST00000430321 DHX37Q8IY37 1157 aaKnown RBP7.2□□□□□ -1.26
UBR3-204ENST00000430321 FAM184AQ8NB25 1140 aa7.2□□□□□ -1.26
UBR3-204ENST00000430321 DHX16O60231 1041 aaKnown RBP7.2□□□□□ -1.26
UBR3-204ENST00000430321 PANK3Q9H999 370 aa7.2□□□□□ -1.26
UBR3-204ENST00000430321 RPRD2Q5VT52 1461 aaKnown RBP7.2□□□□□ -1.26
UBR3-204ENST00000430321 MAP3K1Q13233 1512 aa7.19□□□□□ -1.26
UBR3-204ENST00000430321 C16orf71Q8IYS4 520 aaPredicted RBP7.19□□□□□ -1.26
UBR3-204ENST00000430321 ZPR1O75312 459 aa7.19□□□□□ -1.26
UBR3-204ENST00000430321 ZNF428Q96B54 188 aa7.19□□□□□ -1.26
UBR3-204ENST00000430321 NACAP1Q9BZK3 213 aa7.19□□□□□ -1.26
UBR3-204ENST00000430321 STRN4Q9NRL3 753 aa7.19□□□□□ -1.26
UBR3-204ENST00000430321 ZNF518AQ6AHZ1 1483 aa7.19□□□□□ -1.26
UBR3-204ENST00000430321 H3BQV1 296 aa7.19□□□□□ -1.26
UBR3-204ENST00000430321 IFFO2Q5TF58 517 aa7.19□□□□□ -1.26
UBR3-204ENST00000430321 RBM42Q9BTD8 480 aaKnown RBP7.19□□□□□ -1.26
UBR3-204ENST00000430321 TPD52L1Q16890 204 aaPredicted RBP7.18□□□□□ -1.26
UBR3-204ENST00000430321 CCDC158Q5M9N0 1113 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 DNTTIP2Q5QJE6 756 aaKnown RBP7.18□□□□□ -1.26
UBR3-204ENST00000430321 TRAF1Q13077 416 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 DRC7Q8IY82 874 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 PRXQ9BXM0 1461 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 CPLX1O14810 134 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 RGS3P49796 1198 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 RALYLQ86SE5 291 aaKnown RBP7.18□□□□□ -1.26
UBR3-204ENST00000430321 EHMT1Q9H9B1 1298 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 ITSN2Q9NZM3 1697 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 NSD2O96028 1365 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 PSMA5P28066 241 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 CCDC70Q6NSX1 233 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 AFAP1Q8N556 730 aa7.18□□□□□ -1.26
UBR3-204ENST00000430321 NPHP3Q7Z494 1330 aa7.17□□□□□ -1.26
UBR3-204ENST00000430321 UHRF1BP1Q6BDS2 1440 aa7.17□□□□□ -1.26
UBR3-204ENST00000430321 WDR7Q9Y4E6 1490 aa7.17□□□□□ -1.26
UBR3-204ENST00000430321 EIF2S2P20042 333 aaKnown RBP7.17□□□□□ -1.26
UBR3-204ENST00000430321 FKBP5Q13451 457 aaPredicted RBP7.17□□□□□ -1.26
UBR3-204ENST00000430321 HIRIP3Q9BW71 556 aaPredicted RBP7.17□□□□□ -1.26
UBR3-204ENST00000430321 PDIA4P13667 645 aaKnown RBP7.17□□□□□ -1.26
UBR3-204ENST00000430321 DESP17661 470 aa7.17□□□□□ -1.26
UBR3-204ENST00000430321 IGHMBP2P38935 993 aaKnown RBP7.17□□□□□ -1.26
UBR3-204ENST00000430321 PIP4K2AP48426 406 aaPredicted RBP7.17□□□□□ -1.26
UBR3-204ENST00000430321 RIPK4P57078 832 aa7.17□□□□□ -1.26
UBR3-204ENST00000430321 HSP90AA2PQ14568 343 aaPredicted RBP7.17□□□□□ -1.26
UBR3-204ENST00000430321 ATF7IPQ6VMQ6 1270 aa7.17□□□□□ -1.26
UBR3-204ENST00000430321 ZNF710Q8N1W2 664 aa7.17□□□□□ -1.26
UBR3-204ENST00000430321 NCOA1Q15788 1441 aa7.17□□□□□ -1.26
UBR3-204ENST00000430321 TMOD3Q9NYL9 352 aa7.16□□□□□ -1.26
UBR3-204ENST00000430321 ST20-MTHFSA0A0A6YYL1 179 aa7.16□□□□□ -1.26
UBR3-204ENST00000430321 UBAP1LF5GYI3 381 aa7.16□□□□□ -1.26
UBR3-204ENST00000430321 APPP05067 770 aa7.16□□□□□ -1.26
UBR3-204ENST00000430321 IL27Q8NEV9 243 aa7.16□□□□□ -1.26
UBR3-204ENST00000430321 UBTFL1P0CB47 393 aaPredicted RBP7.16□□□□□ -1.26
UBR3-204ENST00000430321 DHX8Q14562 1220 aaKnown RBP7.16□□□□□ -1.26
UBR3-204ENST00000430321 NFXL1Q6ZNB6 911 aa7.16□□□□□ -1.26
UBR3-204ENST00000430321 GOLGA6L1Q8N7Z2 621 aa7.16□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms