RNA–Protein interactions for RNA: ENST00000429163.6

PDE6B-202, Transcript of phosphodiesterase 6B, humanhuman

TSL 2 BASIC

Gene PDE6B, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-202ENST00000429163 CGNL1Q0VF96 1302 aa24.32■■□□□ 1.48
PDE6B-202ENST00000429163 ANKRD36BQ8N2N9 1353 aa24.31■■□□□ 1.48
PDE6B-202ENST00000429163 SHPRHQ149N8 1683 aa24.3■■□□□ 1.48
PDE6B-202ENST00000429163 APAF1O14727 1248 aa24.29■■□□□ 1.48
PDE6B-202ENST00000429163 PLIN1O60240 522 aa24.29■■□□□ 1.48
PDE6B-202ENST00000429163 RAPGEF3O95398 923 aa24.29■■□□□ 1.48
PDE6B-202ENST00000429163 CENPQQ7L2Z9 268 aaPredicted RBP24.29■■□□□ 1.48
PDE6B-202ENST00000429163 MORC1Q86VD1 984 aa24.29■■□□□ 1.48
PDE6B-202ENST00000429163 REREQ9P2R6 1566 aa24.29■■□□□ 1.48
PDE6B-202ENST00000429163 KDM2BQ8NHM5 1336 aa24.28■■□□□ 1.48
PDE6B-202ENST00000429163 PPP6R1Q9UPN7 881 aa24.28■■□□□ 1.48
PDE6B-202ENST00000429163 PREX1Q8TCU6 1659 aa24.28■■□□□ 1.48
PDE6B-202ENST00000429163 BACH2Q9BYV9 841 aa24.28■■□□□ 1.48
PDE6B-202ENST00000429163 TULP4Q9NRJ4 1543 aa24.27■■□□□ 1.48
PDE6B-202ENST00000429163 TMEM131LA2VDJ0 1609 aa24.26■■□□□ 1.47
PDE6B-202ENST00000429163 PDE4AP27815 886 aa24.26■■□□□ 1.47
PDE6B-202ENST00000429163 SLC12A5Q9H2X9 1139 aa24.25■■□□□ 1.47
PDE6B-202ENST00000429163 CFAP53Q96M91 514 aa24.25■■□□□ 1.47
PDE6B-202ENST00000429163 RUNDC1Q96C34 613 aa24.24■■□□□ 1.47
PDE6B-202ENST00000429163 IDI1Q13907 227 aa24.23■■□□□ 1.47
PDE6B-202ENST00000429163 CCDC27Q2M243 656 aa24.23■■□□□ 1.47
PDE6B-202ENST00000429163 CCDC146Q8IYE0 955 aa24.23■■□□□ 1.47
PDE6B-202ENST00000429163 IQSEC2Q5JU85 1478 aa24.23■■□□□ 1.47
PDE6B-202ENST00000429163 TMEM132EQ6IEE7 984 aa24.23■■□□□ 1.47
PDE6B-202ENST00000429163 PHF23Q9BUL5 403 aaPredicted RBP24.22■■□□□ 1.47
PDE6B-202ENST00000429163 AGLP35573 1532 aa24.22■■□□□ 1.47
PDE6B-202ENST00000429163 YEATS2Q9ULM3 1422 aa24.22■■□□□ 1.47
PDE6B-202ENST00000429163 AAMPQ13685 434 aa24.22■■□□□ 1.47
PDE6B-202ENST00000429163 CLTCQ00610 1675 aaKnown RBP24.21■■□□□ 1.47
PDE6B-202ENST00000429163 PDE3AQ14432 1141 aa24.21■■□□□ 1.47
PDE6B-202ENST00000429163 MED14O60244 1454 aa24.21■■□□□ 1.47
PDE6B-202ENST00000429163 WDR63Q8IWG1 891 aa24.2■■□□□ 1.47
PDE6B-202ENST00000429163 ATAD2Q6PL18 1390 aa24.2■■□□□ 1.46
PDE6B-202ENST00000429163 C20orf194Q5TEA3 1177 aa24.2■■□□□ 1.46
PDE6B-202ENST00000429163 WWC1Q8IX03 1113 aa24.2■■□□□ 1.46
PDE6B-202ENST00000429163 ZBTB47Q9UFB7 747 aaPredicted RBP24.19■■□□□ 1.46
PDE6B-202ENST00000429163 ABCC11Q96J66 1382 aa24.18■■□□□ 1.46
PDE6B-202ENST00000429163 PTPRMP28827 1452 aa24.16■■□□□ 1.46
PDE6B-202ENST00000429163 SPINK5Q9NQ38 1064 aaPredicted RBP24.16■■□□□ 1.46
PDE6B-202ENST00000429163 ANKRD26Q9UPS8 1709 aa24.13■■□□□ 1.45
PDE6B-202ENST00000429163 MYO5BQ9ULV0 1848 aa24.13■■□□□ 1.45
PDE6B-202ENST00000429163 MTHFSP49914 203 aa24.13■■□□□ 1.45
PDE6B-202ENST00000429163 ADGRB2O60241 1585 aa24.12■■□□□ 1.45
PDE6B-202ENST00000429163 YTHDC2Q9H6S0 1430 aaKnown RBP24.11■■□□□ 1.45
PDE6B-202ENST00000429163 DIP2BQ9P265 1576 aa24.11■■□□□ 1.45
PDE6B-202ENST00000429163 DLC1Q96QB1 1528 aa24.11■■□□□ 1.45
PDE6B-202ENST00000429163 CT47B1P0C2W7 299 aaPredicted RBP24.09■■□□□ 1.45
PDE6B-202ENST00000429163 TCP11L2Q8N4U5 519 aa24.09■■□□□ 1.45
PDE6B-202ENST00000429163 DDRGK1Q96HY6 314 aa24.09■■□□□ 1.45
PDE6B-202ENST00000429163 TERF2IPQ9NYB0 399 aa24.09■■□□□ 1.45
PDE6B-202ENST00000429163 ALKQ9UM73 1620 aa24.08■■□□□ 1.45
PDE6B-202ENST00000429163 A0A1W2PP64 1363 aa24.07■■□□□ 1.44
PDE6B-202ENST00000429163 PAK3O75914 559 aaPredicted RBP24.07■■□□□ 1.44
PDE6B-202ENST00000429163 SPATA31D1Q6ZQQ2 1576 aa24.06■■□□□ 1.44
PDE6B-202ENST00000429163 MYH16Q9H6N6 1097 aa24.05■■□□□ 1.44
PDE6B-202ENST00000429163 BCAR3O75815 825 aa24.05■■□□□ 1.44
PDE6B-202ENST00000429163 CABP2Q9NPB3 220 aa24.05■■□□□ 1.44
PDE6B-202ENST00000429163 DMRT2Q9Y5R5 561 aa24.05■■□□□ 1.44
PDE6B-202ENST00000429163 FAM161AQ3B820 660 aa24.03■■□□□ 1.44
PDE6B-202ENST00000429163 ARHGEF40Q8TER5 1519 aa24.03■■□□□ 1.44
PDE6B-202ENST00000429163 COL3A1P02461 1466 aaPredicted RBP24.02■■□□□ 1.44
PDE6B-202ENST00000429163 ZMYM3Q14202 1370 aa24.02■■□□□ 1.44
PDE6B-202ENST00000429163 SRPK2P78362 688 aaKnown RBP24.02■■□□□ 1.44
PDE6B-202ENST00000429163 NLRP1Q9C000 1473 aa24.01■■□□□ 1.43
PDE6B-202ENST00000429163 CD163L1Q9NR16 1453 aa24.01■■□□□ 1.43
PDE6B-202ENST00000429163 RARSP54136 660 aaKnown RBP24.01■■□□□ 1.43
PDE6B-202ENST00000429163 NUTM2DQ5VT03 806 aaPredicted RBP24.01■■□□□ 1.43
PDE6B-202ENST00000429163 PNNQ9H307 717 aaKnown RBP24.01■■□□□ 1.43
PDE6B-202ENST00000429163 TNNT2P45379 298 aaPredicted RBP24■■□□□ 1.43
PDE6B-202ENST00000429163 POGKQ9P215 609 aa23.99■■□□□ 1.43
PDE6B-202ENST00000429163 HDGFL2Q7Z4V5 671 aaPredicted RBP23.99■■□□□ 1.43
PDE6B-202ENST00000429163 CLUAP1Q96AJ1 413 aa23.99■■□□□ 1.43
PDE6B-202ENST00000429163 PNPLA6Q8IY17 1366 aa23.98■■□□□ 1.43
PDE6B-202ENST00000429163 IL16Q14005 1332 aa23.98■■□□□ 1.43
PDE6B-202ENST00000429163 A2ML1A8K2U0 1454 aa23.98■■□□□ 1.43
PDE6B-202ENST00000429163 ATP7BP35670 1465 aa23.98■■□□□ 1.43
PDE6B-202ENST00000429163 PRAM1Q96QH2 718 aa23.98■■□□□ 1.43
PDE6B-202ENST00000429163 KIF13AQ9H1H9 1805 aa23.98■■□□□ 1.43
PDE6B-202ENST00000429163 FAM69CQ0P6D2 419 aa23.98■■□□□ 1.43
PDE6B-202ENST00000429163 U2AF1L5P0DN76 240 aaPredicted RBP23.97■■□□□ 1.43
PDE6B-202ENST00000429163 U2AF1Q01081 240 aaKnown RBP eCLIP23.97■■□□□ 1.43
PDE6B-202ENST00000429163 MAPK8IP3Q9UPT6 1336 aa23.97■■□□□ 1.43
PDE6B-202ENST00000429163 CDC42BPGQ6DT37 1551 aa23.97■■□□□ 1.43
PDE6B-202ENST00000429163 CANXP27824 592 aaKnown RBP23.96■■□□□ 1.43
PDE6B-202ENST00000429163 PMFBP1Q8TBY8 1022 aa23.95■■□□□ 1.42
PDE6B-202ENST00000429163 STK26Q9P289 416 aa23.95■■□□□ 1.42
PDE6B-202ENST00000429163 KIF20BQ96Q89 1820 aa23.95■■□□□ 1.42
PDE6B-202ENST00000429163 SETD1AO15047 1707 aaKnown RBP23.95■■□□□ 1.42
PDE6B-202ENST00000429163 FYB1O15117 783 aa23.95■■□□□ 1.42
PDE6B-202ENST00000429163 USP35Q9P2H5 1018 aa23.95■■□□□ 1.42
PDE6B-202ENST00000429163 PLEKHF1Q96S99 279 aa23.94■■□□□ 1.42
PDE6B-202ENST00000429163 STAG3Q9UJ98 1225 aa23.93■■□□□ 1.42
PDE6B-202ENST00000429163 C8orf34Q49A92 452 aa23.93■■□□□ 1.42
PDE6B-202ENST00000429163 FBXO31Q5XUX0 539 aaPredicted RBP23.93■■□□□ 1.42
PDE6B-202ENST00000429163 NPM2Q86SE8 214 aaKnown RBP23.93■■□□□ 1.42
PDE6B-202ENST00000429163 RIMS2Q9UQ26 1411 aa23.92■■□□□ 1.42
PDE6B-202ENST00000429163 PPM1GO15355 546 aaPredicted RBP23.92■■□□□ 1.42
PDE6B-202ENST00000429163 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.91■■□□□ 1.42
PDE6B-202ENST00000429163 CDK19Q9BWU1 502 aa23.91■■□□□ 1.42
PDE6B-202ENST00000429163 VIRMAQ69YN4 1812 aaKnown RBP23.91■■□□□ 1.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms