RNA–Protein interactions for RNA: ENST00000428896.1

LINC01611-201, Transcript of long intergenic non-protein coding RNA 1611, humanhuman

TSL 5 BASIC

Gene LINC01611, Length 477 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01611-201ENST00000428896 MYSM1Q5VVJ2 828 aa11.75□□□□□ -0.53
LINC01611-201ENST00000428896 RIC3Q7Z5B4 369 aa11.75□□□□□ -0.53
LINC01611-201ENST00000428896 C6orf229H3BNL8 230 aa11.74□□□□□ -0.53
LINC01611-201ENST00000428896 CSPP1Q1MSJ5 1256 aa11.74□□□□□ -0.53
LINC01611-201ENST00000428896 RSBN1LQ6PCB5 846 aaPredicted RBP11.74□□□□□ -0.53
LINC01611-201ENST00000428896 PRDM9Q9NQV7 894 aa11.74□□□□□ -0.53
LINC01611-201ENST00000428896 PCDHB15Q9Y5E8 787 aa11.74□□□□□ -0.53
LINC01611-201ENST00000428896 RNF223E7ERA6 249 aa11.73□□□□□ -0.53
LINC01611-201ENST00000428896 DDRGK1Q96HY6 314 aa11.73□□□□□ -0.53
LINC01611-201ENST00000428896 USB1Q9BQ65 265 aaKnown RBP11.73□□□□□ -0.53
LINC01611-201ENST00000428896 POLR3EQ9NVU0 708 aa11.73□□□□□ -0.53
LINC01611-201ENST00000428896 PLEKHG3A1L390 1219 aa11.72□□□□□ -0.53
LINC01611-201ENST00000428896 IL27Q8NEV9 243 aa11.72□□□□□ -0.53
LINC01611-201ENST00000428896 LIMD1Q9UGP4 676 aa11.72□□□□□ -0.53
LINC01611-201ENST00000428896 SPTLC1O15269 473 aa11.71□□□□□ -0.53
LINC01611-201ENST00000428896 RSPH6AQ9H0K4 717 aa11.7□□□□□ -0.54
LINC01611-201ENST00000428896 MSS51Q4VC12 460 aa11.69□□□□□ -0.54
LINC01611-201ENST00000428896 ATP1B4Q9UN42 357 aaPredicted RBP11.69□□□□□ -0.54
LINC01611-201ENST00000428896 GJA5P36382 358 aa11.67□□□□□ -0.54
LINC01611-201ENST00000428896 CLK2P49760 499 aaKnown RBP11.67□□□□□ -0.54
LINC01611-201ENST00000428896 MTMR2Q13614 643 aa11.67□□□□□ -0.54
LINC01611-201ENST00000428896 RETREG3Q86VR2 466 aa11.67□□□□□ -0.54
LINC01611-201ENST00000428896 ANKLE1Q8NAG6 615 aa11.67□□□□□ -0.54
LINC01611-201ENST00000428896 CABLES1Q8TDN4 633 aa11.67□□□□□ -0.54
LINC01611-201ENST00000428896 HRCP23327 699 aa11.66□□□□□ -0.54
LINC01611-201ENST00000428896 PRKD2Q9BZL6 878 aa11.66□□□□□ -0.54
LINC01611-201ENST00000428896 FCF1Q9Y324 198 aaKnown RBP11.65□□□□□ -0.54
LINC01611-201ENST00000428896 SKIV2LQ15477 1246 aaKnown RBP11.64□□□□□ -0.55
LINC01611-201ENST00000428896 QPCTQ16769 361 aa11.64□□□□□ -0.55
LINC01611-201ENST00000428896 PLA2G2CQ5R387 149 aa11.64□□□□□ -0.55
LINC01611-201ENST00000428896 PRR7Q8TB68 274 aa11.64□□□□□ -0.55
LINC01611-201ENST00000428896 ZBTB3Q9H5J0 574 aa11.64□□□□□ -0.55
LINC01611-201ENST00000428896 NUTM2BA6NNL0 878 aaPredicted RBP11.63□□□□□ -0.55
LINC01611-201ENST00000428896 NUTM2EB1AL46 878 aaPredicted RBP11.63□□□□□ -0.55
LINC01611-201ENST00000428896 RGS20O76081 388 aa11.63□□□□□ -0.55
LINC01611-201ENST00000428896 MMP16P51512 607 aa11.63□□□□□ -0.55
LINC01611-201ENST00000428896 SH3D19Q5HYK7 790 aa11.63□□□□□ -0.55
LINC01611-201ENST00000428896 NUTM2DQ5VT03 806 aaPredicted RBP11.63□□□□□ -0.55
LINC01611-201ENST00000428896 NUTM2AQ8IVF1 878 aaPredicted RBP11.63□□□□□ -0.55
LINC01611-201ENST00000428896 PROCA1Q8NCQ7 364 aaPredicted RBP11.63□□□□□ -0.55
LINC01611-201ENST00000428896 DXOO77932 396 aaKnown RBP11.62□□□□□ -0.55
LINC01611-201ENST00000428896 JUNDP17535 347 aa11.62□□□□□ -0.55
LINC01611-201ENST00000428896 SPDYE5A6NIY4 337 aa11.61□□□□□ -0.55
LINC01611-201ENST00000428896 PRPF38BQ5VTL8 546 aaKnown RBP11.61□□□□□ -0.55
LINC01611-201ENST00000428896 CCDC24Q8N4L8 307 aa11.61□□□□□ -0.55
LINC01611-201ENST00000428896 EMID1Q96A84 441 aaPredicted RBP11.61□□□□□ -0.55
LINC01611-201ENST00000428896 LILRB3O75022 631 aa11.6□□□□□ -0.55
LINC01611-201ENST00000428896 TUSC1Q2TAM9 212 aa11.6□□□□□ -0.55
LINC01611-201ENST00000428896 RTL5Q5HYW3 569 aaPredicted RBP11.6□□□□□ -0.55
LINC01611-201ENST00000428896 LIAT1Q6ZQX7 453 aa11.6□□□□□ -0.55
LINC01611-201ENST00000428896 TSC1Q92574 1164 aa11.6□□□□□ -0.55
LINC01611-201ENST00000428896 SLC19A1P41440 591 aa11.59□□□□□ -0.55
LINC01611-201ENST00000428896 CFAP99D6REC4 459 aa11.58□□□□□ -0.56
LINC01611-201ENST00000428896 V9GY48 417 aaPredicted RBP11.57□□□□□ -0.56
LINC01611-201ENST00000428896 FBXO31Q5XUX0 539 aaPredicted RBP11.56□□□□□ -0.56
LINC01611-201ENST00000428896 NUDT12Q9BQG2 462 aa11.55□□□□□ -0.56
LINC01611-201ENST00000428896 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.55□□□□□ -0.56
LINC01611-201ENST00000428896 ZBTB24O43167 697 aaPredicted RBP11.54□□□□□ -0.56
LINC01611-201ENST00000428896 PCMTD1Q96MG8 357 aaPredicted RBP11.54□□□□□ -0.56
LINC01611-201ENST00000428896 SPRYD7Q5W111 196 aa11.53□□□□□ -0.56
LINC01611-201ENST00000428896 DESI1Q6ICB0 168 aa11.52□□□□□ -0.57
LINC01611-201ENST00000428896 PTPRNQ16849 979 aa11.51□□□□□ -0.57
LINC01611-201ENST00000428896 GOPCQ9HD26 462 aa11.51□□□□□ -0.57
LINC01611-201ENST00000428896 PER1O15534 1290 aaPredicted RBP11.5□□□□□ -0.57
LINC01611-201ENST00000428896 CCNYL3P0C7X3 344 aa11.5□□□□□ -0.57
LINC01611-201ENST00000428896 PTCRAQ6ISU1 281 aaPredicted RBP11.5□□□□□ -0.57
LINC01611-201ENST00000428896 LYPD8Q6UX82 237 aa11.5□□□□□ -0.57
LINC01611-201ENST00000428896 RPIAP49247 311 aa11.49□□□□□ -0.57
LINC01611-201ENST00000428896 ZNF697Q5TEC3 545 aa11.49□□□□□ -0.57
LINC01611-201ENST00000428896 ZNF598Q86UK7 904 aaKnown RBP11.49□□□□□ -0.57
LINC01611-201ENST00000428896 PPP2R2DQ66LE6 453 aa11.48□□□□□ -0.57
LINC01611-201ENST00000428896 HELBQ8NG08 1087 aaPredicted RBP11.48□□□□□ -0.57
LINC01611-201ENST00000428896 EVA1BQ9NVM1 165 aa11.48□□□□□ -0.57
LINC01611-201ENST00000428896 CD2BP2O95400 341 aaKnown RBP11.47□□□□□ -0.57
LINC01611-201ENST00000428896 CTHP32929 405 aa11.47□□□□□ -0.57
LINC01611-201ENST00000428896 CTDSPL2Q05D32 466 aa11.47□□□□□ -0.57
LINC01611-201ENST00000428896 KCNH2Q12809 1159 aa11.46□□□□□ -0.57
LINC01611-201ENST00000428896 AP1G2O75843 785 aa11.45□□□□□ -0.58
LINC01611-201ENST00000428896 RFC5P40937 340 aa11.45□□□□□ -0.58
LINC01611-201ENST00000428896 TRIM32Q13049 653 aa11.45□□□□□ -0.58
LINC01611-201ENST00000428896 IRX2Q9BZI1 471 aaPredicted RBP11.45□□□□□ -0.58
LINC01611-201ENST00000428896 MAP10Q9P2G4 905 aa11.45□□□□□ -0.58
LINC01611-201ENST00000428896 FOXC1Q12948 553 aa11.44□□□□□ -0.58
LINC01611-201ENST00000428896 UNC93B1Q9H1C4 597 aa11.43□□□□□ -0.58
LINC01611-201ENST00000428896 GFRA3O60609 400 aa11.42□□□□□ -0.58
LINC01611-201ENST00000428896 TNFRSF10AO00220 468 aa11.41□□□□□ -0.58
LINC01611-201ENST00000428896 F12P00748 615 aaPredicted RBP11.41□□□□□ -0.58
LINC01611-201ENST00000428896 TRIM67Q6ZTA4 783 aa11.41□□□□□ -0.58
LINC01611-201ENST00000428896 LRRN4Q8WUT4 740 aa11.41□□□□□ -0.58
LINC01611-201ENST00000428896 LINC01559Q495D7 138 aa11.4□□□□□ -0.58
LINC01611-201ENST00000428896 PDZRN3Q9UPQ7 1066 aa11.4□□□□□ -0.58
LINC01611-201ENST00000428896 GDF9O60383 454 aa11.39□□□□□ -0.59
LINC01611-201ENST00000428896 SKOR1P84550 965 aa11.39□□□□□ -0.59
LINC01611-201ENST00000428896 BAP1Q92560 729 aa11.39□□□□□ -0.59
LINC01611-201ENST00000428896 PKD2L1Q9P0L9 805 aa11.38□□□□□ -0.59
LINC01611-201ENST00000428896 USP17L8P0C7I0 530 aa11.36□□□□□ -0.59
LINC01611-201ENST00000428896 SH3BP2P78314 561 aa11.35□□□□□ -0.59
LINC01611-201ENST00000428896 RC3H1Q5TC82 1133 aaKnown RBP11.35□□□□□ -0.59
LINC01611-201ENST00000428896 WNT7BP56706 349 aa11.34□□□□□ -0.59
LINC01611-201ENST00000428896 NR6A1Q15406 480 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 7.2 ms