RNA–Protein interactions for RNA: ENST00000427645.5

SMARCAL1-206, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

TSL 3

Gene SMARCAL1, Length 977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-206ENST00000427645 VGFO15240 615 aaPredicted RBP11.69□□□□□ -0.54
SMARCAL1-206ENST00000427645 DIP2AQ14689 1571 aa11.69□□□□□ -0.54
SMARCAL1-206ENST00000427645 AHDC1Q5TGY3 1603 aaPredicted RBP11.68□□□□□ -0.54
SMARCAL1-206ENST00000427645 RXRBP28702 533 aa11.68□□□□□ -0.54
SMARCAL1-206ENST00000427645 NBPF8Q3BBV2 869 aa11.68□□□□□ -0.54
SMARCAL1-206ENST00000427645 MST1RQ04912 1400 aa11.68□□□□□ -0.54
SMARCAL1-206ENST00000427645 NRXN3Q9Y4C0 1643 aa11.68□□□□□ -0.54
SMARCAL1-206ENST00000427645 AFF2P51816 1311 aa11.67□□□□□ -0.54
SMARCAL1-206ENST00000427645 ASXL1Q8IXJ9 1541 aa11.67□□□□□ -0.54
SMARCAL1-206ENST00000427645 C8orf37Q96NL8 207 aa11.67□□□□□ -0.54
SMARCAL1-206ENST00000427645 ADAMTS2O95450 1211 aa11.65□□□□□ -0.54
SMARCAL1-206ENST00000427645 LRRC59Q96AG4 307 aaKnown RBP11.65□□□□□ -0.54
SMARCAL1-206ENST00000427645 ORAI2Q96SN7 254 aa11.65□□□□□ -0.54
SMARCAL1-206ENST00000427645 FOXD4L1Q9NU39 408 aa11.65□□□□□ -0.54
SMARCAL1-206ENST00000427645 SETBP1Q9Y6X0 1596 aa11.65□□□□□ -0.54
SMARCAL1-206ENST00000427645 XRN1Q8IZH2 1706 aaKnown RBP11.64□□□□□ -0.55
SMARCAL1-206ENST00000427645 DCCP43146 1447 aa11.64□□□□□ -0.55
SMARCAL1-206ENST00000427645 PRAG1Q86YV5 1406 aa11.64□□□□□ -0.55
SMARCAL1-206ENST00000427645 ZNF316A6NFI3 1004 aaPredicted RBP11.64□□□□□ -0.55
SMARCAL1-206ENST00000427645 SHPRHQ149N8 1683 aa11.64□□□□□ -0.55
SMARCAL1-206ENST00000427645 MYOM2P54296 1465 aa11.63□□□□□ -0.55
SMARCAL1-206ENST00000427645 EIF4G2P78344 907 aaKnown RBP eCLIP11.63□□□□□ -0.55
SMARCAL1-206ENST00000427645 QTRT2Q9H974 415 aaKnown RBP11.63□□□□□ -0.55
SMARCAL1-206ENST00000427645 PNPLA6Q8IY17 1366 aa11.63□□□□□ -0.55
SMARCAL1-206ENST00000427645 IFT172Q9UG01 1749 aa11.63□□□□□ -0.55
SMARCAL1-206ENST00000427645 ADGRL3Q9HAR2 1447 aa11.62□□□□□ -0.55
SMARCAL1-206ENST00000427645 PPLO60437 1756 aa11.62□□□□□ -0.55
SMARCAL1-206ENST00000427645 NEXMIFQ5QGS0 1516 aa11.62□□□□□ -0.55
SMARCAL1-206ENST00000427645 ROBO2Q9HCK4 1378 aa11.62□□□□□ -0.55
SMARCAL1-206ENST00000427645 NGLY1Q96IV0 654 aa11.61□□□□□ -0.55
SMARCAL1-206ENST00000427645 CARD11Q9BXL7 1154 aa11.61□□□□□ -0.55
SMARCAL1-206ENST00000427645 RALGAPBQ86X10 1494 aa11.61□□□□□ -0.55
SMARCAL1-206ENST00000427645 KIAA1210Q9ULL0 1709 aa11.6□□□□□ -0.55
SMARCAL1-206ENST00000427645 C1orf167Q5SNV9 1468 aa11.6□□□□□ -0.55
SMARCAL1-206ENST00000427645 ROCK2O75116 1388 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-206ENST00000427645 C14orf93Q9H972 538 aaKnown RBP11.6□□□□□ -0.55
SMARCAL1-206ENST00000427645 NALCNQ8IZF0 1738 aa11.6□□□□□ -0.55
SMARCAL1-206ENST00000427645 TRPM1Q7Z4N2 1603 aa11.6□□□□□ -0.55
SMARCAL1-206ENST00000427645 ADGRF5Q8IZF2 1346 aa11.6□□□□□ -0.55
SMARCAL1-206ENST00000427645 NRXN1Q9ULB1 1477 aa11.59□□□□□ -0.55
SMARCAL1-206ENST00000427645 NUTM2FA1L443 756 aa11.59□□□□□ -0.55
SMARCAL1-206ENST00000427645 NHSL1Q5SYE7 1610 aa11.59□□□□□ -0.55
SMARCAL1-206ENST00000427645 RGS12O14924 1447 aa11.59□□□□□ -0.55
SMARCAL1-206ENST00000427645 GPRASP1Q5JY77 1395 aa11.58□□□□□ -0.56
SMARCAL1-206ENST00000427645 RBM6P78332 1123 aaKnown RBP11.58□□□□□ -0.56
SMARCAL1-206ENST00000427645 XPCQ01831 940 aaPredicted RBP11.58□□□□□ -0.56
SMARCAL1-206ENST00000427645 SLC24A1O60721 1099 aa11.57□□□□□ -0.56
SMARCAL1-206ENST00000427645 NBPF1Q3BBV0 1214 aa11.57□□□□□ -0.56
SMARCAL1-206ENST00000427645 STK26Q9P289 416 aa11.57□□□□□ -0.56
SMARCAL1-206ENST00000427645 PIK3C2GO75747 1445 aa11.57□□□□□ -0.56
SMARCAL1-206ENST00000427645 SRCAPQ6ZRS2 3230 aa11.57□□□□□ -0.56
SMARCAL1-206ENST00000427645 SOS2Q07890 1332 aaPredicted RBP11.57□□□□□ -0.56
SMARCAL1-206ENST00000427645 LAMC1P11047 1609 aa11.57□□□□□ -0.56
SMARCAL1-206ENST00000427645 HSPA5P11021 654 aaKnown RBP11.56□□□□□ -0.56
SMARCAL1-206ENST00000427645 ESCO1Q5FWF5 840 aa11.56□□□□□ -0.56
SMARCAL1-206ENST00000427645 CFAP70Q5T0N1 1121 aa11.56□□□□□ -0.56
SMARCAL1-206ENST00000427645 USP21Q9UK80 565 aa11.56□□□□□ -0.56
SMARCAL1-206ENST00000427645 WAPLQ7Z5K2 1190 aa11.55□□□□□ -0.56
SMARCAL1-206ENST00000427645 CDK12Q9NYV4 1490 aaPredicted RBP11.55□□□□□ -0.56
SMARCAL1-206ENST00000427645 PTCH1Q13635 1447 aa11.54□□□□□ -0.56
SMARCAL1-206ENST00000427645 FOXO3O43524 673 aa11.54□□□□□ -0.56
SMARCAL1-206ENST00000427645 TMEM132EQ6IEE7 984 aa11.54□□□□□ -0.56
SMARCAL1-206ENST00000427645 USP47Q96K76 1375 aa11.54□□□□□ -0.56
SMARCAL1-206ENST00000427645 PLEKHG5O94827 1062 aa11.52□□□□□ -0.57
SMARCAL1-206ENST00000427645 FNBP4Q8N3X1 1017 aaPredicted RBP11.52□□□□□ -0.57
SMARCAL1-206ENST00000427645 EIF3AQ14152 1382 aaKnown RBP11.52□□□□□ -0.57
SMARCAL1-206ENST00000427645 PLEKHH1Q9ULM0 1364 aa11.52□□□□□ -0.57
SMARCAL1-206ENST00000427645 ST20-MTHFSA0A0A6YYL1 179 aa11.51□□□□□ -0.57
SMARCAL1-206ENST00000427645 SLC4A2P04920 1241 aa11.51□□□□□ -0.57
SMARCAL1-206ENST00000427645 HIRIP3Q9BW71 556 aaPredicted RBP11.51□□□□□ -0.57
SMARCAL1-206ENST00000427645 TRPC5Q9UL62 973 aaPredicted RBP11.51□□□□□ -0.57
SMARCAL1-206ENST00000427645 NPHP3Q7Z494 1330 aa11.49□□□□□ -0.57
SMARCAL1-206ENST00000427645 PXDNQ92626 1479 aa11.48□□□□□ -0.57
SMARCAL1-206ENST00000427645 ADGRB1O14514 1584 aa11.47□□□□□ -0.57
SMARCAL1-206ENST00000427645 BCL9LQ86UU0 1499 aa11.47□□□□□ -0.57
SMARCAL1-206ENST00000427645 ATRNO75882 1429 aa11.47□□□□□ -0.57
SMARCAL1-206ENST00000427645 ATAD2Q6PL18 1390 aa11.47□□□□□ -0.57
SMARCAL1-206ENST00000427645 TMF1P82094 1093 aa11.47□□□□□ -0.57
SMARCAL1-206ENST00000427645 CDCA8Q53HL2 280 aa11.47□□□□□ -0.57
SMARCAL1-206ENST00000427645 SIRT1Q96EB6 747 aa11.47□□□□□ -0.57
SMARCAL1-206ENST00000427645 TRAK1Q9UPV9 953 aa11.47□□□□□ -0.57
SMARCAL1-206ENST00000427645 EP400Q96L91 3159 aa11.47□□□□□ -0.57
SMARCAL1-206ENST00000427645 SAFB2Q14151 953 aaKnown RBP eCLIP11.46□□□□□ -0.57
SMARCAL1-206ENST00000427645 CABLES1Q8TDN4 633 aa11.46□□□□□ -0.57
SMARCAL1-206ENST00000427645 GJD4Q96KN9 370 aaPredicted RBP11.46□□□□□ -0.57
SMARCAL1-206ENST00000427645 LRPPRCP42704 1394 aaKnown RBP11.45□□□□□ -0.58
SMARCAL1-206ENST00000427645 ABCC11Q96J66 1382 aa11.45□□□□□ -0.58
SMARCAL1-206ENST00000427645 KRT28Q7Z3Y7 464 aa11.45□□□□□ -0.58
SMARCAL1-206ENST00000427645 YTHDC2Q9H6S0 1430 aaKnown RBP11.44□□□□□ -0.58
SMARCAL1-206ENST00000427645 CENPJQ9HC77 1338 aaPredicted RBP11.44□□□□□ -0.58
SMARCAL1-206ENST00000427645 DIEXFQ68CQ4 756 aaKnown RBP11.44□□□□□ -0.58
SMARCAL1-206ENST00000427645 TESK2Q96S53 571 aa11.44□□□□□ -0.58
SMARCAL1-206ENST00000427645 CDC42BPGQ6DT37 1551 aa11.44□□□□□ -0.58
SMARCAL1-206ENST00000427645 SBNO2Q9Y2G9 1366 aa11.43□□□□□ -0.58
SMARCAL1-206ENST00000427645 COL22A1Q8NFW1 1626 aaPredicted RBP11.43□□□□□ -0.58
SMARCAL1-206ENST00000427645 SPATA31A3Q5VYP0 1347 aa11.43□□□□□ -0.58
SMARCAL1-206ENST00000427645 LMOD2Q6P5Q4 547 aa11.43□□□□□ -0.58
SMARCAL1-206ENST00000427645 POGKQ9P215 609 aa11.43□□□□□ -0.58
SMARCAL1-206ENST00000427645 CCDC7Q96M83 1385 aa11.42□□□□□ -0.58
SMARCAL1-206ENST00000427645 WASHC2AQ641Q2 1341 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms