RNA–Protein interactions for RNA: ENST00000427369.6

LRTOMT-206, Transcript of leucine rich transmembrane and O-methyltransferase domain containing, humanhuman

TSL 1 (best)

Gene LRTOMT, Length 3,299 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRTOMT-206ENST00000427369 ATP10AO60312 1499 aa15.72■□□□□ 0.11
LRTOMT-206ENST00000427369 TCP11L2Q8N4U5 519 aa15.71■□□□□ 0.11
LRTOMT-206ENST00000427369 ZNF692Q9BU19 519 aaPredicted RBP15.71■□□□□ 0.11
LRTOMT-206ENST00000427369 GAS2L3Q86XJ1 694 aa15.7■□□□□ 0.1
LRTOMT-206ENST00000427369 RUNDC1Q96C34 613 aa15.7■□□□□ 0.1
LRTOMT-206ENST00000427369 PREX2Q70Z35 1606 aa15.69■□□□□ 0.1
LRTOMT-206ENST00000427369 MVPQ14764 893 aaKnown RBP15.69■□□□□ 0.1
LRTOMT-206ENST00000427369 FTSJ3Q8IY81 847 aaKnown RBP15.69■□□□□ 0.1
LRTOMT-206ENST00000427369 KDM5AP29375 1690 aaKnown RBP15.68■□□□□ 0.1
LRTOMT-206ENST00000427369 ARHGAP5Q13017 1502 aa15.68■□□□□ 0.1
LRTOMT-206ENST00000427369 POLR3AO14802 1390 aaPredicted RBP15.68■□□□□ 0.1
LRTOMT-206ENST00000427369 TNPO1Q92973 898 aaKnown RBP15.68■□□□□ 0.1
LRTOMT-206ENST00000427369 SCAPERQ9BY12 1400 aa15.67■□□□□ 0.1
LRTOMT-206ENST00000427369 ISY1Q9ULR0 285 aaKnown RBP15.67■□□□□ 0.1
LRTOMT-206ENST00000427369 MAST1Q9Y2H9 1570 aa15.67■□□□□ 0.1
LRTOMT-206ENST00000427369 MORC1Q86VD1 984 aa15.66■□□□□ 0.1
LRTOMT-206ENST00000427369 WDR63Q8IWG1 891 aa15.66■□□□□ 0.1
LRTOMT-206ENST00000427369 DZIP1LQ8IYY4 767 aaKnown RBP15.66■□□□□ 0.1
LRTOMT-206ENST00000427369 ZKSCAN2Q63HK3 967 aa15.65■□□□□ 0.1
LRTOMT-206ENST00000427369 CEP152O94986 1710 aa15.65■□□□□ 0.1
LRTOMT-206ENST00000427369 DDIT3P35638 169 aa15.64■□□□□ 0.09
LRTOMT-206ENST00000427369 FOXD4L1Q9NU39 408 aa15.64■□□□□ 0.09
LRTOMT-206ENST00000427369 HSP90AB1P08238 724 aaKnown RBP15.64■□□□□ 0.09
LRTOMT-206ENST00000427369 CFAP70Q5T0N1 1121 aa15.64■□□□□ 0.09
LRTOMT-206ENST00000427369 DUOX2Q9NRD8 1548 aa15.64■□□□□ 0.09
LRTOMT-206ENST00000427369 ERVK-7P63135 1459 aa15.63■□□□□ 0.09
LRTOMT-206ENST00000427369 GBP4Q96PP9 640 aa15.63■□□□□ 0.09
LRTOMT-206ENST00000427369 PHF23Q9BUL5 403 aaPredicted RBP15.63■□□□□ 0.09
LRTOMT-206ENST00000427369 TPM2P07951 284 aa15.62■□□□□ 0.09
LRTOMT-206ENST00000427369 SPHKAPQ2M3C7 1700 aa15.62■□□□□ 0.09
LRTOMT-206ENST00000427369 ITPRIPQ8IWB1 547 aa15.62■□□□□ 0.09
LRTOMT-206ENST00000427369 NCOA3Q9Y6Q9 1424 aa15.62■□□□□ 0.09
LRTOMT-206ENST00000427369 TTC37Q6PGP7 1564 aa15.62■□□□□ 0.09
LRTOMT-206ENST00000427369 KIAA1211Q6ZU35 1233 aa15.61■□□□□ 0.09
LRTOMT-206ENST00000427369 TSR2Q969E8 191 aaKnown RBP15.61■□□□□ 0.09
LRTOMT-206ENST00000427369 SMC4Q9NTJ3 1288 aa15.61■□□□□ 0.09
LRTOMT-206ENST00000427369 SHPRHQ149N8 1683 aa15.61■□□□□ 0.09
LRTOMT-206ENST00000427369 IQSEC2Q5JU85 1478 aa15.6■□□□□ 0.09
LRTOMT-206ENST00000427369 SMC5Q8IY18 1101 aa15.6■□□□□ 0.09
LRTOMT-206ENST00000427369 HDAC1Q13547 482 aaPredicted RBP15.6■□□□□ 0.09
LRTOMT-206ENST00000427369 RAB3GAP1Q15042 981 aa15.6■□□□□ 0.09
LRTOMT-206ENST00000427369 SKOR2Q2VWA4 1001 aaPredicted RBP15.6■□□□□ 0.09
LRTOMT-206ENST00000427369 SNX21Q969T3 373 aa15.6■□□□□ 0.09
LRTOMT-206ENST00000427369 TRIM27P14373 513 aa15.59■□□□□ 0.09
LRTOMT-206ENST00000427369 RBM25P49756 843 aaKnown RBP15.59■□□□□ 0.09
LRTOMT-206ENST00000427369 MTHFSP49914 203 aa15.59■□□□□ 0.09
LRTOMT-206ENST00000427369 NSD3Q9BZ95 1437 aa15.59■□□□□ 0.09
LRTOMT-206ENST00000427369 STAC3Q96MF2 364 aa15.58■□□□□ 0.09
LRTOMT-206ENST00000427369 PDCL3Q9H2J4 239 aa15.58■□□□□ 0.08
LRTOMT-206ENST00000427369 CIZ1Q9ULV3 898 aaPredicted RBP15.58■□□□□ 0.08
LRTOMT-206ENST00000427369 CCDC27Q2M243 656 aa15.58■□□□□ 0.08
LRTOMT-206ENST00000427369 LNPKQ9C0E8 428 aa15.58■□□□□ 0.08
LRTOMT-206ENST00000427369 DDX19BQ9UMR2 479 aa15.57■□□□□ 0.08
LRTOMT-206ENST00000427369 NASPP49321 788 aaPredicted RBP15.57■□□□□ 0.08
LRTOMT-206ENST00000427369 EXOSC9Q06265 439 aaKnown RBP15.57■□□□□ 0.08
LRTOMT-206ENST00000427369 CCDC173Q0VFZ6 552 aa15.57■□□□□ 0.08
LRTOMT-206ENST00000427369 SLC12A5Q9H2X9 1139 aa15.57■□□□□ 0.08
LRTOMT-206ENST00000427369 CD2BP2O95400 341 aaKnown RBP15.56■□□□□ 0.08
LRTOMT-206ENST00000427369 U2AF1L5P0DN76 240 aaPredicted RBP15.56■□□□□ 0.08
LRTOMT-206ENST00000427369 U2AF1Q01081 240 aaKnown RBP eCLIP15.56■□□□□ 0.08
LRTOMT-206ENST00000427369 CLTCL1P53675 1640 aa15.56■□□□□ 0.08
LRTOMT-206ENST00000427369 TRPM2O94759 1503 aa15.56■□□□□ 0.08
LRTOMT-206ENST00000427369 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP15.56■□□□□ 0.08
LRTOMT-206ENST00000427369 SSH1Q8WYL5 1049 aa15.56■□□□□ 0.08
LRTOMT-206ENST00000427369 ADGRF5Q8IZF2 1346 aa15.55■□□□□ 0.08
LRTOMT-206ENST00000427369 CFAP53Q96M91 514 aa15.55■□□□□ 0.08
LRTOMT-206ENST00000427369 KANK1Q14678 1352 aa15.55■□□□□ 0.08
LRTOMT-206ENST00000427369 SSFA2P28290 1259 aa15.55■□□□□ 0.08
LRTOMT-206ENST00000427369 ATF7IPQ6VMQ6 1270 aa15.55■□□□□ 0.08
LRTOMT-206ENST00000427369 ZSCAN30Q86W11 494 aa15.55■□□□□ 0.08
LRTOMT-206ENST00000427369 TMEM57Q8N5G2 664 aa15.55■□□□□ 0.08
LRTOMT-206ENST00000427369 DNAJC5Q9H3Z4 198 aa15.55■□□□□ 0.08
LRTOMT-206ENST00000427369 NOB1Q9ULX3 412 aaKnown RBP15.55■□□□□ 0.08
LRTOMT-206ENST00000427369 RBM10P98175 930 aaKnown RBP15.54■□□□□ 0.08
LRTOMT-206ENST00000427369 ANP32BQ92688 251 aaKnown RBP15.54■□□□□ 0.08
LRTOMT-206ENST00000427369 PPP1R9BQ96SB3 815 aa15.54■□□□□ 0.08
LRTOMT-206ENST00000427369 RBM42Q9BTD8 480 aaKnown RBP15.54■□□□□ 0.08
LRTOMT-206ENST00000427369 PTMSP20962 102 aa15.53■□□□□ 0.08
LRTOMT-206ENST00000427369 MSNP26038 577 aaKnown RBP15.53■□□□□ 0.08
LRTOMT-206ENST00000427369 KIF2CQ99661 725 aa15.53■□□□□ 0.08
LRTOMT-206ENST00000427369 NUCB1Q02818 461 aa15.53■□□□□ 0.08
LRTOMT-206ENST00000427369 DDX49Q9Y6V7 483 aaKnown RBP15.53■□□□□ 0.08
LRTOMT-206ENST00000427369 OFD1O75665 1012 aa15.52■□□□□ 0.07
LRTOMT-206ENST00000427369 PTPRTO14522 1441 aa15.51■□□□□ 0.07
LRTOMT-206ENST00000427369 GOLGA6L22H0YM25 854 aa15.51■□□□□ 0.07
LRTOMT-206ENST00000427369 K7ELQ4 463 aaPredicted RBP15.51■□□□□ 0.07
LRTOMT-206ENST00000427369 ZBTB40Q9NUA8 1239 aa15.51■□□□□ 0.07
LRTOMT-206ENST00000427369 ZNF518AQ6AHZ1 1483 aa15.51■□□□□ 0.07
LRTOMT-206ENST00000427369 CHD1LQ86WJ1 897 aa15.51■□□□□ 0.07
LRTOMT-206ENST00000427369 GAS2L2Q8NHY3 880 aa15.51■□□□□ 0.07
LRTOMT-206ENST00000427369 CT47B1P0C2W7 299 aaPredicted RBP15.5■□□□□ 0.07
LRTOMT-206ENST00000427369 TRAK1Q9UPV9 953 aa15.5■□□□□ 0.07
LRTOMT-206ENST00000427369 KIAA1210Q9ULL0 1709 aa15.5■□□□□ 0.07
LRTOMT-206ENST00000427369 NCLP19338 710 aaKnown RBP15.49■□□□□ 0.07
LRTOMT-206ENST00000427369 RIPK4P57078 832 aa15.49■□□□□ 0.07
LRTOMT-206ENST00000427369 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.49■□□□□ 0.07
LRTOMT-206ENST00000427369 SHROOM2Q13796 1616 aa15.49■□□□□ 0.07
LRTOMT-206ENST00000427369 ABCA6Q8N139 1617 aa15.49■□□□□ 0.07
LRTOMT-206ENST00000427369 TRAPPC8Q9Y2L5 1435 aa15.49■□□□□ 0.07
LRTOMT-206ENST00000427369 R3HCC1Q9Y3T6 440 aaKnown RBP15.49■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms