RNA–Protein interactions for RNA: ENST00000426538.6

GINS3-203, Transcript of GINS complex subunit 3, humanhuman

TSL 1 (best) BASIC

Gene GINS3, Length 1,728 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS3-203ENST00000426538 TMC1Q8TDI8 760 aa20.68■□□□□ 0.9
GINS3-203ENST00000426538 CABP2Q9NPB3 220 aa20.68■□□□□ 0.9
GINS3-203ENST00000426538 CPS1P31327 1500 aa20.68■□□□□ 0.9
GINS3-203ENST00000426538 PER1O15534 1290 aaPredicted RBP20.67■□□□□ 0.9
GINS3-203ENST00000426538 CNGB1Q14028 1251 aaPredicted RBP20.67■□□□□ 0.9
GINS3-203ENST00000426538 NCKAP5LQ9HCH0 1330 aa20.67■□□□□ 0.9
GINS3-203ENST00000426538 NPHP4O75161 1426 aaPredicted RBP20.67■□□□□ 0.9
GINS3-203ENST00000426538 PTPRUQ92729 1446 aa20.67■□□□□ 0.9
GINS3-203ENST00000426538 TULP4Q9NRJ4 1543 aa20.66■□□□□ 0.9
GINS3-203ENST00000426538 CDK19Q9BWU1 502 aa20.66■□□□□ 0.9
GINS3-203ENST00000426538 KNSTRNQ9Y448 316 aa20.66■□□□□ 0.9
GINS3-203ENST00000426538 ROBO2Q9HCK4 1378 aa20.66■□□□□ 0.9
GINS3-203ENST00000426538 MYOM1P52179 1685 aa20.63■□□□□ 0.89
GINS3-203ENST00000426538 ATAD2Q6PL18 1390 aa20.63■□□□□ 0.89
GINS3-203ENST00000426538 SLC12A5Q9H2X9 1139 aa20.63■□□□□ 0.89
GINS3-203ENST00000426538 WASLO00401 505 aaPredicted RBP20.62■□□□□ 0.89
GINS3-203ENST00000426538 KTN1Q86UP2 1357 aaKnown RBP20.6■□□□□ 0.89
GINS3-203ENST00000426538 PTCH1Q13635 1447 aa20.6■□□□□ 0.89
GINS3-203ENST00000426538 KCNA6P17658 529 aa20.6■□□□□ 0.89
GINS3-203ENST00000426538 RALBP1Q15311 655 aa20.6■□□□□ 0.89
GINS3-203ENST00000426538 NINLQ9Y2I6 1382 aa20.6■□□□□ 0.89
GINS3-203ENST00000426538 HSPA2P54652 639 aa20.59■□□□□ 0.89
GINS3-203ENST00000426538 CC2D1BQ5T0F9 858 aaKnown RBP20.58■□□□□ 0.88
GINS3-203ENST00000426538 XRN1Q8IZH2 1706 aaKnown RBP20.56■□□□□ 0.88
GINS3-203ENST00000426538 CHD2O14647 1828 aaKnown RBP20.56■□□□□ 0.88
GINS3-203ENST00000426538 TERF2IPQ9NYB0 399 aa20.56■□□□□ 0.88
GINS3-203ENST00000426538 YTHDC1Q96MU7 727 aaKnown RBP20.55■□□□□ 0.88
GINS3-203ENST00000426538 CARD14Q9BXL6 1004 aa20.55■□□□□ 0.88
GINS3-203ENST00000426538 LMTK3Q96Q04 1460 aa20.55■□□□□ 0.88
GINS3-203ENST00000426538 ANKRD36BQ8N2N9 1353 aa20.54■□□□□ 0.88
GINS3-203ENST00000426538 CABP1Q9NZU7 370 aa20.54■□□□□ 0.88
GINS3-203ENST00000426538 AMER1Q5JTC6 1135 aaPredicted RBP20.53■□□□□ 0.88
GINS3-203ENST00000426538 SIPA1L2Q9P2F8 1722 aaPredicted RBP20.53■□□□□ 0.88
GINS3-203ENST00000426538 HDGFL2Q7Z4V5 671 aaPredicted RBP20.53■□□□□ 0.88
GINS3-203ENST00000426538 NUDT16Q96DE0 195 aaKnown RBP20.53■□□□□ 0.88
GINS3-203ENST00000426538 MYBBP1AQ9BQG0 1328 aaKnown RBP20.52■□□□□ 0.88
GINS3-203ENST00000426538 CCDC61Q9Y6R9 512 aa20.52■□□□□ 0.88
GINS3-203ENST00000426538 PARD3Q8TEW0 1356 aa20.51■□□□□ 0.87
GINS3-203ENST00000426538 MRS2Q9HD23 443 aa20.51■□□□□ 0.87
GINS3-203ENST00000426538 NPC1L1Q9UHC9 1359 aa20.51■□□□□ 0.87
GINS3-203ENST00000426538 ADGRB2O60241 1585 aa20.51■□□□□ 0.87
GINS3-203ENST00000426538 NSD3Q9BZ95 1437 aa20.49■□□□□ 0.87
GINS3-203ENST00000426538 CGNL1Q0VF96 1302 aa20.48■□□□□ 0.87
GINS3-203ENST00000426538 PPIP5K1Q6PFW1 1433 aa20.47■□□□□ 0.87
GINS3-203ENST00000426538 A0A1W2PP64 1363 aa20.47■□□□□ 0.87
GINS3-203ENST00000426538 CCDC184Q52MB2 194 aa20.47■□□□□ 0.87
GINS3-203ENST00000426538 NUTM2FA1L443 756 aa20.46■□□□□ 0.87
GINS3-203ENST00000426538 NLRP13Q86W25 1043 aa20.45■□□□□ 0.86
GINS3-203ENST00000426538 PROSER2Q86WR7 435 aaPredicted RBP20.45■□□□□ 0.86
GINS3-203ENST00000426538 C14orf37Q86TY3 774 aa20.44■□□□□ 0.86
GINS3-203ENST00000426538 PRR36Q9H6K5 1346 aa20.44■□□□□ 0.86
GINS3-203ENST00000426538 ATP7BP35670 1465 aa20.44■□□□□ 0.86
GINS3-203ENST00000426538 BRD4O60885 1362 aaPredicted RBP20.43■□□□□ 0.86
GINS3-203ENST00000426538 RBM33Q96EV2 1170 aaKnown RBP20.43■□□□□ 0.86
GINS3-203ENST00000426538 ZNF692Q9BU19 519 aaPredicted RBP20.43■□□□□ 0.86
GINS3-203ENST00000426538 NWD1Q149M9 1564 aa20.43■□□□□ 0.86
GINS3-203ENST00000426538 CD163L1Q9NR16 1453 aa20.43■□□□□ 0.86
GINS3-203ENST00000426538 MORC1Q86VD1 984 aa20.41■□□□□ 0.86
GINS3-203ENST00000426538 NSD2O96028 1365 aa20.4■□□□□ 0.86
GINS3-203ENST00000426538 FAM9BQ8IZU0 186 aa20.4■□□□□ 0.86
GINS3-203ENST00000426538 STRCQ7RTU9 1775 aa20.4■□□□□ 0.86
GINS3-203ENST00000426538 USP32Q8NFA0 1604 aa20.4■□□□□ 0.86
GINS3-203ENST00000426538 NKTRP30414 1462 aaKnown RBP20.39■□□□□ 0.86
GINS3-203ENST00000426538 PLEKHG3A1L390 1219 aa20.39■□□□□ 0.86
GINS3-203ENST00000426538 CPSF1Q10570 1443 aaKnown RBP20.39■□□□□ 0.85
GINS3-203ENST00000426538 CENPBP07199 599 aaPredicted RBP20.39■□□□□ 0.85
GINS3-203ENST00000426538 PPP2R1AP30153 589 aa20.39■□□□□ 0.85
GINS3-203ENST00000426538 ADGRL3Q9HAR2 1447 aa20.38■□□□□ 0.85
GINS3-203ENST00000426538 DMRT2Q9Y5R5 561 aa20.38■□□□□ 0.85
GINS3-203ENST00000426538 ANKARQ7Z5J8 1434 aa20.38■□□□□ 0.85
GINS3-203ENST00000426538 CDC42BPGQ6DT37 1551 aa20.37■□□□□ 0.85
GINS3-203ENST00000426538 SUGP2Q8IX01 1082 aaKnown RBP eCLIP20.36■□□□□ 0.85
GINS3-203ENST00000426538 ACEP12821 1306 aa20.36■□□□□ 0.85
GINS3-203ENST00000426538 NALCNQ8IZF0 1738 aa20.36■□□□□ 0.85
GINS3-203ENST00000426538 FYB1O15117 783 aa20.36■□□□□ 0.85
GINS3-203ENST00000426538 EDC4Q6P2E9 1401 aaKnown RBP20.35■□□□□ 0.85
GINS3-203ENST00000426538 NGDNQ8NEJ9 315 aaKnown RBP20.35■□□□□ 0.85
GINS3-203ENST00000426538 PMFBP1Q8TBY8 1022 aa20.35■□□□□ 0.85
GINS3-203ENST00000426538 C19orf44Q9H6X5 657 aa20.35■□□□□ 0.85
GINS3-203ENST00000426538 PNISRQ8TF01 805 aaKnown RBP20.34■□□□□ 0.85
GINS3-203ENST00000426538 GGNBP2Q9H3C7 697 aa20.34■□□□□ 0.85
GINS3-203ENST00000426538 ITSN1Q15811 1721 aa20.34■□□□□ 0.85
GINS3-203ENST00000426538 FMN2Q9NZ56 1722 aa20.34■□□□□ 0.85
GINS3-203ENST00000426538 TOPAZ1Q8N9V7 1692 aa20.34■□□□□ 0.85
GINS3-203ENST00000426538 TNNT2P45379 298 aaPredicted RBP20.33■□□□□ 0.85
GINS3-203ENST00000426538 NCOA3Q9Y6Q9 1424 aa20.32■□□□□ 0.84
GINS3-203ENST00000426538 TMEM94Q12767 1356 aa20.31■□□□□ 0.84
GINS3-203ENST00000426538 RGPD8O14715 1765 aaPredicted RBP20.31■□□□□ 0.84
GINS3-203ENST00000426538 AKAP12Q02952 1782 aa20.3■□□□□ 0.84
GINS3-203ENST00000426538 STRCP1A6NGW2 1772 aa20.3■□□□□ 0.84
GINS3-203ENST00000426538 ATF3P18847 181 aa20.29■□□□□ 0.84
GINS3-203ENST00000426538 POLR3AO14802 1390 aaPredicted RBP20.29■□□□□ 0.84
GINS3-203ENST00000426538 MON2Q7Z3U7 1717 aa20.28■□□□□ 0.84
GINS3-203ENST00000426538 ESCO1Q5FWF5 840 aa20.28■□□□□ 0.84
GINS3-203ENST00000426538 PHF8Q9UPP1 1060 aa20.28■□□□□ 0.84
GINS3-203ENST00000426538 TTC21BQ7Z4L5 1316 aa20.27■□□□□ 0.84
GINS3-203ENST00000426538 USP6P35125 1406 aa20.27■□□□□ 0.84
GINS3-203ENST00000426538 KIF20BQ96Q89 1820 aa20.27■□□□□ 0.84
GINS3-203ENST00000426538 HNRNPUQ00839 825 aaKnown RBP eCLIP20.27■□□□□ 0.83
GINS3-203ENST00000426538 ZNF335Q9H4Z2 1342 aaPredicted RBP20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms