RNA–Protein interactions for RNA: ENST00000425516.1

CHCHD3P1-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3 pseudogene 1, humanhuman

BASIC

Gene CHCHD3P1, Length 676 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3P1-201ENST00000425516 TMEM2Q9UHN6 1383 aa10.31□□□□□ -0.76
CHCHD3P1-201ENST00000425516 LTKP29376 864 aa10.31□□□□□ -0.76
CHCHD3P1-201ENST00000425516 SIN3AQ96ST3 1273 aa10.31□□□□□ -0.76
CHCHD3P1-201ENST00000425516 TRIM35Q9UPQ4 493 aa10.31□□□□□ -0.76
CHCHD3P1-201ENST00000425516 SLIT1O75093 1534 aa10.31□□□□□ -0.76
CHCHD3P1-201ENST00000425516 ZFYVE9O95405 1425 aa10.31□□□□□ -0.76
CHCHD3P1-201ENST00000425516 CLSPNQ9HAW4 1339 aa10.31□□□□□ -0.76
CHCHD3P1-201ENST00000425516 CHGAP10645 457 aaKnown RBP10.3□□□□□ -0.76
CHCHD3P1-201ENST00000425516 POTEJP0CG39 1038 aa10.29□□□□□ -0.76
CHCHD3P1-201ENST00000425516 RPGRIP1LQ68CZ1 1315 aa10.29□□□□□ -0.76
CHCHD3P1-201ENST00000425516 KIF1BO60333 1816 aa10.28□□□□□ -0.76
CHCHD3P1-201ENST00000425516 MYO5BQ9ULV0 1848 aa10.28□□□□□ -0.76
CHCHD3P1-201ENST00000425516 RIMS2Q9UQ26 1411 aa10.28□□□□□ -0.76
CHCHD3P1-201ENST00000425516 RGL3Q3MIN7 710 aa10.28□□□□□ -0.76
CHCHD3P1-201ENST00000425516 ANKLE2Q86XL3 938 aa10.28□□□□□ -0.76
CHCHD3P1-201ENST00000425516 COLQQ9Y215 455 aaPredicted RBP10.28□□□□□ -0.76
CHCHD3P1-201ENST00000425516 NCKAP5LQ9HCH0 1330 aa10.28□□□□□ -0.76
CHCHD3P1-201ENST00000425516 TXNDC2Q86VQ3 553 aa10.27□□□□□ -0.77
CHCHD3P1-201ENST00000425516 NEXMIFQ5QGS0 1516 aa10.27□□□□□ -0.77
CHCHD3P1-201ENST00000425516 STRCQ7RTU9 1775 aa10.26□□□□□ -0.77
CHCHD3P1-201ENST00000425516 MED14O60244 1454 aa10.26□□□□□ -0.77
CHCHD3P1-201ENST00000425516 SCAF11Q99590 1463 aaKnown RBP10.26□□□□□ -0.77
CHCHD3P1-201ENST00000425516 ZNF326Q5BKZ1 582 aaKnown RBP10.26□□□□□ -0.77
CHCHD3P1-201ENST00000425516 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.26□□□□□ -0.77
CHCHD3P1-201ENST00000425516 CCER1Q8TC90 406 aaPredicted RBP10.26□□□□□ -0.77
CHCHD3P1-201ENST00000425516 SLC39A7Q92504 469 aa10.26□□□□□ -0.77
CHCHD3P1-201ENST00000425516 EID1Q9Y6B2 187 aa10.26□□□□□ -0.77
CHCHD3P1-201ENST00000425516 HDGFP51858 240 aaKnown RBP10.25□□□□□ -0.77
CHCHD3P1-201ENST00000425516 NEUROD1Q13562 356 aa10.25□□□□□ -0.77
CHCHD3P1-201ENST00000425516 ZNF467Q7Z7K2 595 aaPredicted RBP10.25□□□□□ -0.77
CHCHD3P1-201ENST00000425516 VGFO15240 615 aaPredicted RBP10.24□□□□□ -0.77
CHCHD3P1-201ENST00000425516 NUTM2DQ5VT03 806 aaPredicted RBP10.24□□□□□ -0.77
CHCHD3P1-201ENST00000425516 L3MBTL2Q969R5 705 aa10.24□□□□□ -0.77
CHCHD3P1-201ENST00000425516 PLEKHG1Q9ULL1 1385 aa10.24□□□□□ -0.77
CHCHD3P1-201ENST00000425516 C7P10643 843 aa10.23□□□□□ -0.77
CHCHD3P1-201ENST00000425516 PSEN1P49768 467 aa10.23□□□□□ -0.77
CHCHD3P1-201ENST00000425516 STAC3Q96MF2 364 aa10.23□□□□□ -0.77
CHCHD3P1-201ENST00000425516 IFT172Q9UG01 1749 aa10.23□□□□□ -0.77
CHCHD3P1-201ENST00000425516 ADGRF5Q8IZF2 1346 aa10.23□□□□□ -0.77
CHCHD3P1-201ENST00000425516 PPLO60437 1756 aa10.23□□□□□ -0.77
CHCHD3P1-201ENST00000425516 NRXN1Q9ULB1 1477 aa10.23□□□□□ -0.77
CHCHD3P1-201ENST00000425516 DCAF11Q8TEB1 546 aa10.22□□□□□ -0.77
CHCHD3P1-201ENST00000425516 NPHP4O75161 1426 aaPredicted RBP10.22□□□□□ -0.77
CHCHD3P1-201ENST00000425516 POLR1AO95602 1720 aaPredicted RBP10.21□□□□□ -0.77
CHCHD3P1-201ENST00000425516 ADAMTS13Q76LX8 1427 aa10.21□□□□□ -0.78
CHCHD3P1-201ENST00000425516 MYOM2P54296 1465 aa10.21□□□□□ -0.78
CHCHD3P1-201ENST00000425516 PPP1R15AO75807 674 aaPredicted RBP10.2□□□□□ -0.78
CHCHD3P1-201ENST00000425516 TIMELESSQ9UNS1 1208 aa10.2□□□□□ -0.78
CHCHD3P1-201ENST00000425516 KDM2AQ9Y2K7 1162 aa10.2□□□□□ -0.78
CHCHD3P1-201ENST00000425516 TBX22Q9Y458 520 aa10.2□□□□□ -0.78
CHCHD3P1-201ENST00000425516 NRXN3Q9Y4C0 1643 aa10.19□□□□□ -0.78
CHCHD3P1-201ENST00000425516 SETBP1Q9Y6X0 1596 aa10.19□□□□□ -0.78
CHCHD3P1-201ENST00000425516 PIK3C2GO75747 1445 aa10.19□□□□□ -0.78
CHCHD3P1-201ENST00000425516 OTUD5Q96G74 571 aa10.19□□□□□ -0.78
CHCHD3P1-201ENST00000425516 SLC26A8Q96RN1 970 aa10.19□□□□□ -0.78
CHCHD3P1-201ENST00000425516 IQGAP1P46940 1657 aa10.18□□□□□ -0.78
CHCHD3P1-201ENST00000425516 TONSLQ96HA7 1378 aa10.18□□□□□ -0.78
CHCHD3P1-201ENST00000425516 RGL2O15211 777 aa10.18□□□□□ -0.78
CHCHD3P1-201ENST00000425516 PDAP1Q13442 181 aaKnown RBP10.18□□□□□ -0.78
CHCHD3P1-201ENST00000425516 PRAG1Q86YV5 1406 aa10.17□□□□□ -0.78
CHCHD3P1-201ENST00000425516 IRX5P78411 483 aaPredicted RBP10.17□□□□□ -0.78
CHCHD3P1-201ENST00000425516 NBPF8Q3BBV2 869 aa10.17□□□□□ -0.78
CHCHD3P1-201ENST00000425516 C14orf93Q9H972 538 aaKnown RBP10.17□□□□□ -0.78
CHCHD3P1-201ENST00000425516 ALKQ9UM73 1620 aa10.17□□□□□ -0.78
CHCHD3P1-201ENST00000425516 ECM2O94769 699 aaPredicted RBP10.16□□□□□ -0.78
CHCHD3P1-201ENST00000425516 CFAP70Q5T0N1 1121 aa10.16□□□□□ -0.78
CHCHD3P1-201ENST00000425516 SETD1AO15047 1707 aaKnown RBP10.16□□□□□ -0.78
CHCHD3P1-201ENST00000425516 METP08581 1390 aa10.15□□□□□ -0.78
CHCHD3P1-201ENST00000425516 DIP2AQ14689 1571 aa10.15□□□□□ -0.78
CHCHD3P1-201ENST00000425516 RIOK3O14730 519 aaKnown RBP10.15□□□□□ -0.78
CHCHD3P1-201ENST00000425516 BCANQ96GW7 911 aa10.15□□□□□ -0.78
CHCHD3P1-201ENST00000425516 PTPRUQ92729 1446 aa10.15□□□□□ -0.79
CHCHD3P1-201ENST00000425516 PIK3R4Q99570 1358 aa10.14□□□□□ -0.79
CHCHD3P1-201ENST00000425516 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.14□□□□□ -0.79
CHCHD3P1-201ENST00000425516 IER5LQ5T953 404 aa10.14□□□□□ -0.79
CHCHD3P1-201ENST00000425516 ZFP91Q96JP5 570 aaPredicted RBP10.14□□□□□ -0.79
CHCHD3P1-201ENST00000425516 CABP2Q9NPB3 220 aa10.14□□□□□ -0.79
CHCHD3P1-201ENST00000425516 ASXL1Q8IXJ9 1541 aa10.13□□□□□ -0.79
CHCHD3P1-201ENST00000425516 ZNF335Q9H4Z2 1342 aaPredicted RBP10.13□□□□□ -0.79
CHCHD3P1-201ENST00000425516 KCNA6P17658 529 aa10.13□□□□□ -0.79
CHCHD3P1-201ENST00000425516 NBPF1Q3BBV0 1214 aa10.13□□□□□ -0.79
CHCHD3P1-201ENST00000425516 ADGRB1O14514 1584 aa10.13□□□□□ -0.79
CHCHD3P1-201ENST00000425516 SEC24BO95487 1268 aa10.12□□□□□ -0.79
CHCHD3P1-201ENST00000425516 TMEM132EQ6IEE7 984 aa10.12□□□□□ -0.79
CHCHD3P1-201ENST00000425516 LTBP4Q8N2S1 1624 aa10.11□□□□□ -0.79
CHCHD3P1-201ENST00000425516 KIAA1210Q9ULL0 1709 aa10.11□□□□□ -0.79
CHCHD3P1-201ENST00000425516 PDCD7Q8N8D1 485 aaKnown RBP10.11□□□□□ -0.79
CHCHD3P1-201ENST00000425516 AMOTL2Q9Y2J4 779 aa10.11□□□□□ -0.79
CHCHD3P1-201ENST00000425516 CHD2O14647 1828 aaKnown RBP10.11□□□□□ -0.79
CHCHD3P1-201ENST00000425516 LRPPRCP42704 1394 aaKnown RBP10.11□□□□□ -0.79
CHCHD3P1-201ENST00000425516 ABCC11Q96J66 1382 aa10.11□□□□□ -0.79
CHCHD3P1-201ENST00000425516 STRCP1A6NGW2 1772 aa10.11□□□□□ -0.79
CHCHD3P1-201ENST00000425516 LAMC1P11047 1609 aa10.11□□□□□ -0.79
CHCHD3P1-201ENST00000425516 NWD1Q149M9 1564 aa10.1□□□□□ -0.79
CHCHD3P1-201ENST00000425516 GPRASP1Q5JY77 1395 aa10.1□□□□□ -0.79
CHCHD3P1-201ENST00000425516 TRPM1Q7Z4N2 1603 aa10.1□□□□□ -0.79
CHCHD3P1-201ENST00000425516 TECPR2O15040 1411 aa10.09□□□□□ -0.79
CHCHD3P1-201ENST00000425516 YTHDC2Q9H6S0 1430 aaKnown RBP10.09□□□□□ -0.79
CHCHD3P1-201ENST00000425516 SIRT1Q96EB6 747 aa10.09□□□□□ -0.79
CHCHD3P1-201ENST00000425516 XRN1Q8IZH2 1706 aaKnown RBP10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms