RNA–Protein interactions for RNA: ENST00000423927.2

KNTC1-203, Transcript of kinetochore associated 1, humanhuman

TSL 4

Gene KNTC1, Length 1,250 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1-203ENST00000423927 CHGAP10645 457 aaKnown RBP12.99□□□□□ -0.33
KNTC1-203ENST00000423927 KCNA4P22459 653 aa12.99□□□□□ -0.33
KNTC1-203ENST00000423927 BAG6P46379 1132 aa12.99□□□□□ -0.33
KNTC1-203ENST00000423927 TMEM131LA2VDJ0 1609 aa12.99□□□□□ -0.33
KNTC1-203ENST00000423927 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.98□□□□□ -0.33
KNTC1-203ENST00000423927 POLA2Q14181 598 aa12.97□□□□□ -0.33
KNTC1-203ENST00000423927 BCL9LQ86UU0 1499 aa12.97□□□□□ -0.33
KNTC1-203ENST00000423927 MYOM3Q5VTT5 1437 aa12.96□□□□□ -0.33
KNTC1-203ENST00000423927 LAMC1P11047 1609 aa12.95□□□□□ -0.34
KNTC1-203ENST00000423927 COL22A1Q8NFW1 1626 aaPredicted RBP12.95□□□□□ -0.34
KNTC1-203ENST00000423927 RPRD2Q5VT52 1461 aaKnown RBP12.95□□□□□ -0.34
KNTC1-203ENST00000423927 CROCC2H7BZ55 1655 aa12.95□□□□□ -0.34
KNTC1-203ENST00000423927 PTPRUQ92729 1446 aa12.95□□□□□ -0.34
KNTC1-203ENST00000423927 SOS2Q07890 1332 aaPredicted RBP12.94□□□□□ -0.34
KNTC1-203ENST00000423927 XRN1Q8IZH2 1706 aaKnown RBP12.93□□□□□ -0.34
KNTC1-203ENST00000423927 SENP3-EIF4A1A0A087X0R7 540 aa12.92□□□□□ -0.34
KNTC1-203ENST00000423927 R3HDM1Q15032 1099 aaKnown RBP12.92□□□□□ -0.34
KNTC1-203ENST00000423927 UNC5CLQ8IV45 518 aa12.92□□□□□ -0.34
KNTC1-203ENST00000423927 ADGRL3Q9HAR2 1447 aa12.92□□□□□ -0.34
KNTC1-203ENST00000423927 RALGAPBQ86X10 1494 aa12.91□□□□□ -0.34
KNTC1-203ENST00000423927 NALCNQ8IZF0 1738 aa12.91□□□□□ -0.34
KNTC1-203ENST00000423927 GLI3P10071 1580 aa12.91□□□□□ -0.34
KNTC1-203ENST00000423927 KRT27Q7Z3Y8 459 aa12.91□□□□□ -0.34
KNTC1-203ENST00000423927 SEPT12Q8IYM1 358 aa12.91□□□□□ -0.34
KNTC1-203ENST00000423927 C1orf167Q5SNV9 1468 aa12.91□□□□□ -0.34
KNTC1-203ENST00000423927 RGPD1P0DJD0 1748 aa12.89□□□□□ -0.35
KNTC1-203ENST00000423927 ORAI2Q96SN7 254 aa12.88□□□□□ -0.35
KNTC1-203ENST00000423927 MYOM2P54296 1465 aa12.88□□□□□ -0.35
KNTC1-203ENST00000423927 ANKRD30AQ9BXX3 1397 aa12.87□□□□□ -0.35
KNTC1-203ENST00000423927 EN1Q05925 392 aaPredicted RBP12.87□□□□□ -0.35
KNTC1-203ENST00000423927 AKT1S1Q96B36 256 aa12.87□□□□□ -0.35
KNTC1-203ENST00000423927 CCDC9Q9Y3X0 531 aaKnown RBP12.87□□□□□ -0.35
KNTC1-203ENST00000423927 A0A0G2JS52 829 aa12.85□□□□□ -0.35
KNTC1-203ENST00000423927 MYT1Q01538 1121 aa12.85□□□□□ -0.35
KNTC1-203ENST00000423927 PPP1R1BQ9UD71 204 aaPredicted RBP12.85□□□□□ -0.35
KNTC1-203ENST00000423927 CHD4Q14839 1912 aa12.85□□□□□ -0.35
KNTC1-203ENST00000423927 ABCC5O15440 1437 aa12.85□□□□□ -0.35
KNTC1-203ENST00000423927 NPHP3Q7Z494 1330 aa12.85□□□□□ -0.35
KNTC1-203ENST00000423927 PTPN23Q9H3S7 1636 aa12.84□□□□□ -0.35
KNTC1-203ENST00000423927 SLIT2O94813 1529 aa12.83□□□□□ -0.35
KNTC1-203ENST00000423927 VPS72Q15906 364 aa12.83□□□□□ -0.36
KNTC1-203ENST00000423927 CHIC2Q9UKJ5 165 aa12.83□□□□□ -0.36
KNTC1-203ENST00000423927 NRXN3Q9Y4C0 1643 aa12.83□□□□□ -0.36
KNTC1-203ENST00000423927 ONECUT3O60422 494 aaPredicted RBP12.82□□□□□ -0.36
KNTC1-203ENST00000423927 NWD2Q9ULI1 1742 aa12.82□□□□□ -0.36
KNTC1-203ENST00000423927 DAPK1P53355 1430 aa12.81□□□□□ -0.36
KNTC1-203ENST00000423927 HAP1P54257 671 aaPredicted RBP12.81□□□□□ -0.36
KNTC1-203ENST00000423927 ZNF784Q8NCA9 323 aaPredicted RBP12.81□□□□□ -0.36
KNTC1-203ENST00000423927 METP08581 1390 aa12.81□□□□□ -0.36
KNTC1-203ENST00000423927 LRPPRCP42704 1394 aaKnown RBP12.81□□□□□ -0.36
KNTC1-203ENST00000423927 MYCNP04198 464 aaPredicted RBP12.8□□□□□ -0.36
KNTC1-203ENST00000423927 C1QTNF8P60827 252 aa12.8□□□□□ -0.36
KNTC1-203ENST00000423927 ESCO1Q5FWF5 840 aa12.8□□□□□ -0.36
KNTC1-203ENST00000423927 PIP4P2Q8N4L2 257 aa12.8□□□□□ -0.36
KNTC1-203ENST00000423927 IQGAP3Q86VI3 1631 aa12.79□□□□□ -0.36
KNTC1-203ENST00000423927 USP32Q8NFA0 1604 aa12.78□□□□□ -0.36
KNTC1-203ENST00000423927 E9PCH4 1651 aa12.78□□□□□ -0.36
KNTC1-203ENST00000423927 PLCH1Q4KWH8 1693 aa12.78□□□□□ -0.36
KNTC1-203ENST00000423927 XPCQ01831 940 aaPredicted RBP12.78□□□□□ -0.36
KNTC1-203ENST00000423927 EZH2Q15910 746 aaKnown RBP12.78□□□□□ -0.36
KNTC1-203ENST00000423927 ZNF326Q5BKZ1 582 aaKnown RBP12.78□□□□□ -0.36
KNTC1-203ENST00000423927 SPON1Q9HCB6 807 aa12.78□□□□□ -0.36
KNTC1-203ENST00000423927 NINLQ9Y2I6 1382 aa12.78□□□□□ -0.36
KNTC1-203ENST00000423927 FOXO3O43524 673 aa12.77□□□□□ -0.37
KNTC1-203ENST00000423927 NBPF8Q3BBV2 869 aa12.77□□□□□ -0.37
KNTC1-203ENST00000423927 NBPF14Q5TI25 921 aa12.77□□□□□ -0.37
KNTC1-203ENST00000423927 DISP2A7MBM2 1401 aa12.77□□□□□ -0.37
KNTC1-203ENST00000423927 PXDNQ92626 1479 aa12.77□□□□□ -0.37
KNTC1-203ENST00000423927 TNS1Q9HBL0 1735 aaKnown RBP12.76□□□□□ -0.37
KNTC1-203ENST00000423927 CAMTA1Q9Y6Y1 1673 aa12.76□□□□□ -0.37
KNTC1-203ENST00000423927 ADGRB2O60241 1585 aa12.75□□□□□ -0.37
KNTC1-203ENST00000423927 ADGRL2O95490 1459 aa12.75□□□□□ -0.37
KNTC1-203ENST00000423927 KCNQ2O43526 872 aa12.74□□□□□ -0.37
KNTC1-203ENST00000423927 FAM98CQ17RN3 349 aaKnown RBP12.74□□□□□ -0.37
KNTC1-203ENST00000423927 REM2Q8IYK8 340 aaPredicted RBP12.74□□□□□ -0.37
KNTC1-203ENST00000423927 CAMKK2Q96RR4 588 aa12.73□□□□□ -0.37
KNTC1-203ENST00000423927 ANKRD50Q9ULJ7 1429 aa12.72□□□□□ -0.37
KNTC1-203ENST00000423927 PARD3Q8TEW0 1356 aa12.72□□□□□ -0.37
KNTC1-203ENST00000423927 HAX1O00165 279 aa12.72□□□□□ -0.37
KNTC1-203ENST00000423927 KANK4Q5T7N3 995 aaPredicted RBP12.72□□□□□ -0.37
KNTC1-203ENST00000423927 SPATA31A3Q5VYP0 1347 aa12.71□□□□□ -0.37
KNTC1-203ENST00000423927 FAM182BQ5T319 152 aa12.71□□□□□ -0.37
KNTC1-203ENST00000423927 APBA3O96018 575 aa12.7□□□□□ -0.38
KNTC1-203ENST00000423927 HFM1A2PYH4 1435 aa12.7□□□□□ -0.38
KNTC1-203ENST00000423927 ROBO2Q9HCK4 1378 aa12.69□□□□□ -0.38
KNTC1-203ENST00000423927 NUP188Q5SRE5 1749 aa12.69□□□□□ -0.38
KNTC1-203ENST00000423927 TRIM37O94972 964 aa12.69□□□□□ -0.38
KNTC1-203ENST00000423927 ZBTB12Q9Y330 459 aaPredicted RBP12.69□□□□□ -0.38
KNTC1-203ENST00000423927 RREB1Q92766 1687 aa12.69□□□□□ -0.38
KNTC1-203ENST00000423927 KIF1BO60333 1816 aa12.68□□□□□ -0.38
KNTC1-203ENST00000423927 PLEKHG5O94827 1062 aa12.68□□□□□ -0.38
KNTC1-203ENST00000423927 FAM196AQ6ZSG2 479 aa12.68□□□□□ -0.38
KNTC1-203ENST00000423927 CDC42BPGQ6DT37 1551 aa12.68□□□□□ -0.38
KNTC1-203ENST00000423927 KIF1AQ12756 1690 aa12.67□□□□□ -0.38
KNTC1-203ENST00000423927 PSME1Q06323 249 aa12.67□□□□□ -0.38
KNTC1-203ENST00000423927 KRT28Q7Z3Y7 464 aa12.67□□□□□ -0.38
KNTC1-203ENST00000423927 CCDC144AA2RUR9 1427 aa12.67□□□□□ -0.38
KNTC1-203ENST00000423927 NRAPQ86VF7 1730 aa12.66□□□□□ -0.38
KNTC1-203ENST00000423927 NUTM2FA1L443 756 aa12.66□□□□□ -0.38
KNTC1-203ENST00000423927 CABLES1Q8TDN4 633 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms