RNA–Protein interactions for RNA: ENST00000423613.6

TNC-203, Transcript of tenascin C, humanhuman

TSL 1 (best) BASIC

Gene TNC, Length 6,281 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNC-203ENST00000423613 PSME1Q06323 249 aa13.43□□□□□ -0.26
TNC-203ENST00000423613 NEXNQ0ZGT2 675 aa13.43□□□□□ -0.26
TNC-203ENST00000423613 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.43□□□□□ -0.26
TNC-203ENST00000423613 COG6Q9Y2V7 657 aa13.43□□□□□ -0.26
TNC-203ENST00000423613 MRE11P49959 708 aa13.42□□□□□ -0.26
TNC-203ENST00000423613 CCAR1Q8IX12 1150 aaKnown RBP13.42□□□□□ -0.26
TNC-203ENST00000423613 PDILTQ8N807 584 aa13.42□□□□□ -0.26
TNC-203ENST00000423613 USP8P40818 1118 aa13.42□□□□□ -0.26
TNC-203ENST00000423613 TEFQ10587 303 aa13.42□□□□□ -0.26
TNC-203ENST00000423613 SASS6Q6UVJ0 657 aa13.42□□□□□ -0.26
TNC-203ENST00000423613 BICD2Q8TD16 824 aa13.42□□□□□ -0.26
TNC-203ENST00000423613 CT47B1P0C2W7 299 aaPredicted RBP13.41□□□□□ -0.26
TNC-203ENST00000423613 IPO4Q8TEX9 1081 aaKnown RBP13.41□□□□□ -0.26
TNC-203ENST00000423613 INCENPQ9NQS7 918 aa13.41□□□□□ -0.26
TNC-203ENST00000423613 ZBED9Q6R2W3 1325 aa13.41□□□□□ -0.26
TNC-203ENST00000423613 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.41□□□□□ -0.26
TNC-203ENST00000423613 NECTIN2Q92692 538 aa13.41□□□□□ -0.26
TNC-203ENST00000423613 RNF214Q8ND24 703 aa13.4□□□□□ -0.26
TNC-203ENST00000423613 COG3Q96JB2 828 aa13.4□□□□□ -0.26
TNC-203ENST00000423613 CGNL1Q0VF96 1302 aa13.4□□□□□ -0.26
TNC-203ENST00000423613 CLASRPQ8N2M8 674 aaKnown RBP13.4□□□□□ -0.26
TNC-203ENST00000423613 ANKRD20A12PQ8NF67 263 aa13.4□□□□□ -0.26
TNC-203ENST00000423613 TRERF1Q96PN7 1200 aa13.4□□□□□ -0.26
TNC-203ENST00000423613 HSP90AB2PQ58FF8 381 aa13.4□□□□□ -0.26
TNC-203ENST00000423613 ABCF1Q8NE71 845 aaKnown RBP eCLIP13.39□□□□□ -0.27
TNC-203ENST00000423613 USP47Q96K76 1375 aa13.39□□□□□ -0.27
TNC-203ENST00000423613 FYB1O15117 783 aa13.39□□□□□ -0.27
TNC-203ENST00000423613 ATF3P18847 181 aa13.39□□□□□ -0.27
TNC-203ENST00000423613 CHMP5Q9NZZ3 219 aa13.39□□□□□ -0.27
TNC-203ENST00000423613 GOLGA6L7A0A1B0GV03 622 aa13.38□□□□□ -0.27
TNC-203ENST00000423613 UBE2Q2Q8WVN8 375 aa13.38□□□□□ -0.27
TNC-203ENST00000423613 APAF1O14727 1248 aa13.38□□□□□ -0.27
TNC-203ENST00000423613 ZHX1Q9UKY1 873 aaPredicted RBP13.38□□□□□ -0.27
TNC-203ENST00000423613 CBX1P83916 185 aa13.37□□□□□ -0.27
TNC-203ENST00000423613 CGNQ9P2M7 1197 aaKnown RBP13.37□□□□□ -0.27
TNC-203ENST00000423613 EVC2Q86UK5 1308 aa13.37□□□□□ -0.27
TNC-203ENST00000423613 TOP2AP11388 1531 aaKnown RBP13.37□□□□□ -0.27
TNC-203ENST00000423613 UACAQ9BZF9 1416 aa13.36□□□□□ -0.27
TNC-203ENST00000423613 C9orf78Q9NZ63 289 aaPredicted RBP13.36□□□□□ -0.27
TNC-203ENST00000423613 FAM193AP78312 1265 aa13.36□□□□□ -0.27
TNC-203ENST00000423613 FOSBP53539 338 aa13.36□□□□□ -0.27
TNC-203ENST00000423613 TRIM29Q14134 588 aa13.36□□□□□ -0.27
TNC-203ENST00000423613 WIZO95785 1651 aa13.36□□□□□ -0.27
TNC-203ENST00000423613 TMEM132AQ24JP5 1023 aa13.36□□□□□ -0.27
TNC-203ENST00000423613 ENOX2Q16206 610 aaKnown RBP13.36□□□□□ -0.27
TNC-203ENST00000423613 BBXQ8WY36 941 aaPredicted RBP13.35□□□□□ -0.27
TNC-203ENST00000423613 MTMR7Q9Y216 660 aa13.35□□□□□ -0.27
TNC-203ENST00000423613 MINK1Q8N4C8 1332 aaPredicted RBP13.35□□□□□ -0.27
TNC-203ENST00000423613 ANKRD62A6NC57 917 aa13.35□□□□□ -0.27
TNC-203ENST00000423613 ZMYND15Q9H091 742 aa13.35□□□□□ -0.27
TNC-203ENST00000423613 IKQ13123 557 aaPredicted RBP13.35□□□□□ -0.27
TNC-203ENST00000423613 PAF1Q8N7H5 531 aa13.35□□□□□ -0.27
TNC-203ENST00000423613 CCDC27Q2M243 656 aa13.35□□□□□ -0.27
TNC-203ENST00000423613 SPC24Q8NBT2 197 aa13.35□□□□□ -0.27
TNC-203ENST00000423613 CT47A1Q5JQC4 288 aaPredicted RBP13.34□□□□□ -0.27
TNC-203ENST00000423613 NFXL1Q6ZNB6 911 aa13.34□□□□□ -0.27
TNC-203ENST00000423613 CCDC173Q0VFZ6 552 aa13.34□□□□□ -0.27
TNC-203ENST00000423613 LRRFIP1Q32MZ4 808 aaKnown RBP13.34□□□□□ -0.27
TNC-203ENST00000423613 JPH4Q96JJ6 628 aa13.34□□□□□ -0.27
TNC-203ENST00000423613 DDX19BQ9UMR2 479 aa13.34□□□□□ -0.27
TNC-203ENST00000423613 HMGN5P82970 282 aaKnown RBP13.34□□□□□ -0.27
TNC-203ENST00000423613 CCDC47Q96A33 483 aaKnown RBP13.34□□□□□ -0.27
TNC-203ENST00000423613 VGFO15240 615 aaPredicted RBP13.33□□□□□ -0.28
TNC-203ENST00000423613 CHMP4CQ96CF2 233 aa13.33□□□□□ -0.28
TNC-203ENST00000423613 BCCIPQ9P287 314 aaKnown RBP eCLIP13.33□□□□□ -0.28
TNC-203ENST00000423613 FAM177BA6PVY3 158 aa13.33□□□□□ -0.28
TNC-203ENST00000423613 REC8O95072 547 aa13.33□□□□□ -0.28
TNC-203ENST00000423613 ANO2Q9NQ90 1003 aa13.32□□□□□ -0.28
TNC-203ENST00000423613 ERICH2A1L162 156 aa13.32□□□□□ -0.28
TNC-203ENST00000423613 GOLGA6L10A6NI86 522 aa13.32□□□□□ -0.28
TNC-203ENST00000423613 ODF2Q5BJF6 829 aa13.32□□□□□ -0.28
TNC-203ENST00000423613 DZIP1LQ8IYY4 767 aaKnown RBP13.32□□□□□ -0.28
TNC-203ENST00000423613 MYO6Q9UM54 1294 aa13.32□□□□□ -0.28
TNC-203ENST00000423613 NUTM2BA6NNL0 878 aaPredicted RBP13.32□□□□□ -0.28
TNC-203ENST00000423613 NUTM2EB1AL46 878 aaPredicted RBP13.32□□□□□ -0.28
TNC-203ENST00000423613 WWC2Q6AWC2 1192 aa13.32□□□□□ -0.28
TNC-203ENST00000423613 NUTM2AQ8IVF1 878 aaPredicted RBP13.32□□□□□ -0.28
TNC-203ENST00000423613 RUFY2Q8WXA3 655 aa13.32□□□□□ -0.28
TNC-203ENST00000423613 HOOK1Q9UJC3 728 aaKnown RBP13.32□□□□□ -0.28
TNC-203ENST00000423613 DIAPH1O60610 1272 aaKnown RBP13.31□□□□□ -0.28
TNC-203ENST00000423613 MPNDQ8N594 471 aa13.31□□□□□ -0.28
TNC-203ENST00000423613 RIPK4P57078 832 aa13.31□□□□□ -0.28
TNC-203ENST00000423613 TRIM5Q9C035 493 aa13.31□□□□□ -0.28
TNC-203ENST00000423613 VPS37CA5D8V6 355 aaPredicted RBP13.31□□□□□ -0.28
TNC-203ENST00000423613 SMC2O95347 1197 aa13.31□□□□□ -0.28
TNC-203ENST00000423613 TRAK2O60296 914 aa13.3□□□□□ -0.28
TNC-203ENST00000423613 ZFYVE27Q5T4F4 411 aa13.3□□□□□ -0.28
TNC-203ENST00000423613 CAVIN1Q6NZI2 390 aaKnown RBP13.3□□□□□ -0.28
TNC-203ENST00000423613 ZKSCAN1P17029 563 aaPredicted RBP13.3□□□□□ -0.28
TNC-203ENST00000423613 CPLX2Q6PUV4 134 aaKnown RBP13.3□□□□□ -0.28
TNC-203ENST00000423613 TAX1BP1Q86VP1 789 aa13.3□□□□□ -0.28
TNC-203ENST00000423613 CADPSQ9ULU8 1353 aa13.3□□□□□ -0.28
TNC-203ENST00000423613 IFIT2P09913 472 aaKnown RBP13.3□□□□□ -0.28
TNC-203ENST00000423613 TSPY26PQ9H489 355 aa13.3□□□□□ -0.28
TNC-203ENST00000423613 NF2P35240 595 aa13.29□□□□□ -0.28
TNC-203ENST00000423613 API5Q9BZZ5 524 aaKnown RBP13.29□□□□□ -0.28
TNC-203ENST00000423613 CLGNO14967 610 aa13.29□□□□□ -0.28
TNC-203ENST00000423613 IRX3P78415 501 aaPredicted RBP13.29□□□□□ -0.28
TNC-203ENST00000423613 TRDNQ13061 729 aa13.29□□□□□ -0.28
TNC-203ENST00000423613 CPLX1O14810 134 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms