RNA–Protein interactions for RNA: ENST00000421386.1

SCG2-202, Transcript of secretogranin II, humanhuman

TSL 3

Gene SCG2, Length 589 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCG2-202ENST00000421386 KDM2AQ9Y2K7 1162 aa7.6□□□□□ -1.19
SCG2-202ENST00000421386 DDX11L8A8MPP1 907 aa7.59□□□□□ -1.19
SCG2-202ENST00000421386 GNPATO15228 680 aa7.59□□□□□ -1.19
SCG2-202ENST00000421386 TOR4AQ9NXH8 423 aa7.59□□□□□ -1.19
SCG2-202ENST00000421386 RNF19BQ6ZMZ0 732 aa7.58□□□□□ -1.2
SCG2-202ENST00000421386 GCGRP47871 477 aa7.56□□□□□ -1.2
SCG2-202ENST00000421386 HAP1P54257 671 aaPredicted RBP7.56□□□□□ -1.2
SCG2-202ENST00000421386 BRICD5Q6PL45 260 aa7.56□□□□□ -1.2
SCG2-202ENST00000421386 RPIAP49247 311 aa7.55□□□□□ -1.2
SCG2-202ENST00000421386 GMPR2Q9P2T1 348 aaKnown RBP7.55□□□□□ -1.2
SCG2-202ENST00000421386 AVPP01185 164 aa7.54□□□□□ -1.2
SCG2-202ENST00000421386 ATP6V1AP38606 617 aa7.54□□□□□ -1.2
SCG2-202ENST00000421386 TREML4Q6UXN2 200 aa7.54□□□□□ -1.2
SCG2-202ENST00000421386 CRIPAKQ8N1N5 446 aa7.54□□□□□ -1.2
SCG2-202ENST00000421386 FMNL1O95466 1100 aaPredicted RBP7.53□□□□□ -1.2
SCG2-202ENST00000421386 LCE2CQ5TA81 110 aa7.53□□□□□ -1.2
SCG2-202ENST00000421386 RSPH4AQ5TD94 716 aa7.52□□□□□ -1.21
SCG2-202ENST00000421386 LMOD2Q6P5Q4 547 aa7.52□□□□□ -1.21
SCG2-202ENST00000421386 HLA-CQ95604 372 aa7.52□□□□□ -1.21
SCG2-202ENST00000421386 SMPD1P17405 629 aa7.5□□□□□ -1.21
SCG2-202ENST00000421386 MSS51Q4VC12 460 aa7.5□□□□□ -1.21
SCG2-202ENST00000421386 CYP4X1Q8N118 509 aa7.5□□□□□ -1.21
SCG2-202ENST00000421386 PKNOX2Q96KN3 472 aa7.5□□□□□ -1.21
SCG2-202ENST00000421386 CD2BP2O95400 341 aaKnown RBP7.49□□□□□ -1.21
SCG2-202ENST00000421386 SALL2Q9Y467 1007 aaPredicted RBP7.49□□□□□ -1.21
SCG2-202ENST00000421386 SUPT16HQ9Y5B9 1047 aaKnown RBP7.49□□□□□ -1.21
SCG2-202ENST00000421386 AXIN1O15169 862 aa7.48□□□□□ -1.21
SCG2-202ENST00000421386 SMYD5Q6GMV2 418 aa7.48□□□□□ -1.21
SCG2-202ENST00000421386 J3QL48 77 aa7.47□□□□□ -1.21
SCG2-202ENST00000421386 CD46P15529 392 aa7.47□□□□□ -1.21
SCG2-202ENST00000421386 TRIM32Q13049 653 aa7.47□□□□□ -1.21
SCG2-202ENST00000421386 GPIHBP1Q8IV16 184 aa7.47□□□□□ -1.21
SCG2-202ENST00000421386 C11orf95C9JLR9 678 aaPredicted RBP7.46□□□□□ -1.22
SCG2-202ENST00000421386 SMCPP49901 116 aaPredicted RBP7.46□□□□□ -1.22
SCG2-202ENST00000421386 MMP16P51512 607 aa7.46□□□□□ -1.22
SCG2-202ENST00000421386 NFX1Q12986 1120 aaKnown RBP7.46□□□□□ -1.22
SCG2-202ENST00000421386 SULF1Q8IWU6 871 aa7.46□□□□□ -1.22
SCG2-202ENST00000421386 MRGPRX2Q96LB1 330 aa7.46□□□□□ -1.22
SCG2-202ENST00000421386 TTC24A2A3L6 582 aaPredicted RBP7.45□□□□□ -1.22
SCG2-202ENST00000421386 WNT7AO00755 349 aa7.45□□□□□ -1.22
SCG2-202ENST00000421386 SNRPBP14678 240 aaKnown RBP7.45□□□□□ -1.22
SCG2-202ENST00000421386 SKOR1P84550 965 aa7.45□□□□□ -1.22
SCG2-202ENST00000421386 GUCA2AQ02747 115 aa7.45□□□□□ -1.22
SCG2-202ENST00000421386 PODXL2Q9NZ53 605 aa7.45□□□□□ -1.22
SCG2-202ENST00000421386 VSIG10Q8N0Z9 540 aa7.44□□□□□ -1.22
SCG2-202ENST00000421386 FANCIQ9NVI1 1328 aa7.44□□□□□ -1.22
SCG2-202ENST00000421386 DXOO77932 396 aaKnown RBP7.43□□□□□ -1.22
SCG2-202ENST00000421386 CTC1Q2NKJ3 1217 aa7.43□□□□□ -1.22
SCG2-202ENST00000421386 SNIP1Q8TAD8 396 aaKnown RBP7.43□□□□□ -1.22
SCG2-202ENST00000421386 HPS1Q92902 700 aa7.43□□□□□ -1.22
SCG2-202ENST00000421386 ATP13A2Q9NQ11 1180 aa7.43□□□□□ -1.22
SCG2-202ENST00000421386 ZBTB24O43167 697 aaPredicted RBP7.42□□□□□ -1.22
SCG2-202ENST00000421386 WFS1O76024 890 aa7.42□□□□□ -1.22
SCG2-202ENST00000421386 SYMPKQ92797 1274 aaKnown RBP7.42□□□□□ -1.22
SCG2-202ENST00000421386 MDM2Q00987 491 aaPredicted RBP7.41□□□□□ -1.22
SCG2-202ENST00000421386 USB1Q9BQ65 265 aaKnown RBP7.41□□□□□ -1.22
SCG2-202ENST00000421386 KDM4AO75164 1064 aa7.4□□□□□ -1.22
SCG2-202ENST00000421386 HOXA2O43364 376 aa7.39□□□□□ -1.23
SCG2-202ENST00000421386 NEFLP07196 543 aa7.39□□□□□ -1.23
SCG2-202ENST00000421386 MAP2K5Q13163 448 aa7.39□□□□□ -1.23
SCG2-202ENST00000421386 Q3C1V9 767 aa7.39□□□□□ -1.23
SCG2-202ENST00000421386 CCDC24Q8N4L8 307 aa7.39□□□□□ -1.23
SCG2-202ENST00000421386 IRF6O14896 467 aa7.38□□□□□ -1.23
SCG2-202ENST00000421386 DEKP35659 375 aaKnown RBP7.38□□□□□ -1.23
SCG2-202ENST00000421386 RC3H1Q5TC82 1133 aaKnown RBP7.38□□□□□ -1.23
SCG2-202ENST00000421386 PTCRAQ6ISU1 281 aaPredicted RBP7.38□□□□□ -1.23
SCG2-202ENST00000421386 GRIPAP1Q4V328 841 aa7.37□□□□□ -1.23
SCG2-202ENST00000421386 TRIM47Q96LD4 638 aa7.37□□□□□ -1.23
SCG2-202ENST00000421386 WIPF1O43516 503 aa7.36□□□□□ -1.23
SCG2-202ENST00000421386 GLIPR1L2Q4G1C9 344 aa7.36□□□□□ -1.23
SCG2-202ENST00000421386 CCDC102AQ96A19 550 aa7.36□□□□□ -1.23
SCG2-202ENST00000421386 REPIN1Q9BWE0 567 aaKnown RBP7.36□□□□□ -1.23
SCG2-202ENST00000421386 RBM19Q9Y4C8 960 aaKnown RBP7.36□□□□□ -1.23
SCG2-202ENST00000421386 TERTO14746 1132 aaKnown RBP7.35□□□□□ -1.23
SCG2-202ENST00000421386 CCER1Q8TC90 406 aaPredicted RBP7.35□□□□□ -1.23
SCG2-202ENST00000421386 PCDHGC3Q9UN70 934 aa7.35□□□□□ -1.23
SCG2-202ENST00000421386 BMP1P13497 986 aa7.34□□□□□ -1.23
SCG2-202ENST00000421386 JUNDP17535 347 aa7.34□□□□□ -1.23
SCG2-202ENST00000421386 SIAH2O43255 324 aa7.33□□□□□ -1.24
SCG2-202ENST00000421386 FAM217BQ9NTX9 383 aaPredicted RBP7.33□□□□□ -1.24
SCG2-202ENST00000421386 ALDH1A1P00352 501 aa7.32□□□□□ -1.24
SCG2-202ENST00000421386 WNT7BP56706 349 aa7.32□□□□□ -1.24
SCG2-202ENST00000421386 TRIM46Q7Z4K8 759 aa7.32□□□□□ -1.24
SCG2-202ENST00000421386 USP46P62068 366 aa7.31□□□□□ -1.24
SCG2-202ENST00000421386 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.31□□□□□ -1.24
SCG2-202ENST00000421386 MINK1Q8N4C8 1332 aaPredicted RBP7.3□□□□□ -1.24
SCG2-202ENST00000421386 SUPT5HO00267 1087 aaKnown RBP7.3□□□□□ -1.24
SCG2-202ENST00000421386 LORP23490 312 aaPredicted RBP7.3□□□□□ -1.24
SCG2-202ENST00000421386 RANGAP1P46060 587 aaPredicted RBP7.3□□□□□ -1.24
SCG2-202ENST00000421386 ARXQ96QS3 562 aa7.3□□□□□ -1.24
SCG2-202ENST00000421386 NUDT12Q9BQG2 462 aa7.3□□□□□ -1.24
SCG2-202ENST00000421386 YTHDC1Q96MU7 727 aaKnown RBP7.29□□□□□ -1.24
SCG2-202ENST00000421386 SENP2Q9HC62 589 aa7.29□□□□□ -1.24
SCG2-202ENST00000421386 GPCPD1Q9NPB8 672 aa7.29□□□□□ -1.24
SCG2-202ENST00000421386 STK17AQ9UEE5 414 aa7.29□□□□□ -1.24
SCG2-202ENST00000421386 VEGFBP49765 207 aa7.28□□□□□ -1.24
SCG2-202ENST00000421386 SH3BP2P78314 561 aa7.28□□□□□ -1.24
SCG2-202ENST00000421386 NDUFV2P19404 249 aa7.27□□□□□ -1.25
SCG2-202ENST00000421386 LINC01559Q495D7 138 aa7.27□□□□□ -1.25
SCG2-202ENST00000421386 RETREG3Q86VR2 466 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 17.1 ms