RNA–Protein interactions for RNA: ENST00000421212.1

LINC01249-202, Transcript of long intergenic non-protein coding RNA 1249, humanhuman

TSL 3

Gene LINC01249, Length 507 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01249-202ENST00000421212 ZDHHC16Q969W1 377 aa6.56□□□□□ -1.36
LINC01249-202ENST00000421212 TSR3Q9UJK0 312 aaKnown RBP6.56□□□□□ -1.36
LINC01249-202ENST00000421212 MAGI2Q86UL8 1455 aa6.55□□□□□ -1.36
LINC01249-202ENST00000421212 LOC105371045A0A1W2PR82 267 aa6.55□□□□□ -1.36
LINC01249-202ENST00000421212 PPP1R3GB7ZBB8 358 aa6.55□□□□□ -1.36
LINC01249-202ENST00000421212 GPHNQ9NQX3 736 aaPredicted RBP6.55□□□□□ -1.36
LINC01249-202ENST00000421212 VPS8Q8N3P4 1428 aa6.55□□□□□ -1.36
LINC01249-202ENST00000421212 PTPRTO14522 1441 aa6.54□□□□□ -1.36
LINC01249-202ENST00000421212 PLCH2O75038 1416 aa6.54□□□□□ -1.36
LINC01249-202ENST00000421212 PPP1R18Q6NYC8 613 aa6.54□□□□□ -1.36
LINC01249-202ENST00000421212 SETD1BQ9UPS6 1966 aaKnown RBP6.54□□□□□ -1.36
LINC01249-202ENST00000421212 C3P01024 1663 aa6.54□□□□□ -1.36
LINC01249-202ENST00000421212 ARHGAP5Q13017 1502 aa6.54□□□□□ -1.36
LINC01249-202ENST00000421212 C9orf84Q5VXU9 1444 aa6.53□□□□□ -1.36
LINC01249-202ENST00000421212 UHRF1BP1Q6BDS2 1440 aa6.53□□□□□ -1.36
LINC01249-202ENST00000421212 DSG2Q14126 1118 aa6.53□□□□□ -1.36
LINC01249-202ENST00000421212 OXER1Q8TDS5 423 aa6.53□□□□□ -1.36
LINC01249-202ENST00000421212 CDKN2AIPQ9NXV6 580 aaPredicted RBP6.53□□□□□ -1.36
LINC01249-202ENST00000421212 HPS5Q9UPZ3 1129 aa6.53□□□□□ -1.36
LINC01249-202ENST00000421212 EHBP1L1Q8N3D4 1523 aa6.53□□□□□ -1.36
LINC01249-202ENST00000421212 CCNB3Q8WWL7 1395 aa6.53□□□□□ -1.36
LINC01249-202ENST00000421212 ATP10AO60312 1499 aa6.53□□□□□ -1.36
LINC01249-202ENST00000421212 IQSEC2Q5JU85 1478 aa6.53□□□□□ -1.36
LINC01249-202ENST00000421212 NCOA1Q15788 1441 aa6.52□□□□□ -1.37
LINC01249-202ENST00000421212 SCAPERQ9BY12 1400 aa6.52□□□□□ -1.37
LINC01249-202ENST00000421212 STK25O00506 426 aa6.52□□□□□ -1.37
LINC01249-202ENST00000421212 DGAT1O75907 488 aa6.52□□□□□ -1.37
LINC01249-202ENST00000421212 MYT1Q01538 1121 aa6.52□□□□□ -1.37
LINC01249-202ENST00000421212 UPF1Q92900 1129 aaKnown RBP eCLIP6.52□□□□□ -1.37
LINC01249-202ENST00000421212 LRCH3Q96II8 777 aa6.52□□□□□ -1.37
LINC01249-202ENST00000421212 ADAM33Q9BZ11 813 aa6.52□□□□□ -1.37
LINC01249-202ENST00000421212 EIF4ENIF1Q9NRA8 985 aaKnown RBP6.52□□□□□ -1.37
LINC01249-202ENST00000421212 DIP2CQ9Y2E4 1556 aa6.52□□□□□ -1.37
LINC01249-202ENST00000421212 POTECB2RU33 542 aa6.51□□□□□ -1.37
LINC01249-202ENST00000421212 WFS1O76024 890 aa6.51□□□□□ -1.37
LINC01249-202ENST00000421212 PROX2Q3B8N5 592 aa6.51□□□□□ -1.37
LINC01249-202ENST00000421212 PLEKHH2Q8IVE3 1493 aa6.51□□□□□ -1.37
LINC01249-202ENST00000421212 KDM5CP41229 1560 aa6.51□□□□□ -1.37
LINC01249-202ENST00000421212 MED1Q15648 1581 aaPredicted RBP6.51□□□□□ -1.37
LINC01249-202ENST00000421212 ABCA6Q8N139 1617 aa6.5□□□□□ -1.37
LINC01249-202ENST00000421212 ZNF518AQ6AHZ1 1483 aa6.5□□□□□ -1.37
LINC01249-202ENST00000421212 GGCXP38435 758 aa6.5□□□□□ -1.37
LINC01249-202ENST00000421212 CFDP1Q9UEE9 299 aaPredicted RBP6.5□□□□□ -1.37
LINC01249-202ENST00000421212 ZNF777Q9ULD5 760 aaPredicted RBP6.5□□□□□ -1.37
LINC01249-202ENST00000421212 MYO5CQ9NQX4 1742 aa6.49□□□□□ -1.37
LINC01249-202ENST00000421212 CAMSAP1Q5T5Y3 1602 aa6.49□□□□□ -1.37
LINC01249-202ENST00000421212 ZNF335Q9H4Z2 1342 aaPredicted RBP6.49□□□□□ -1.37
LINC01249-202ENST00000421212 TIAM1Q13009 1591 aa6.48□□□□□ -1.37
LINC01249-202ENST00000421212 REREQ9P2R6 1566 aa6.48□□□□□ -1.37
LINC01249-202ENST00000421212 FAM181BA6NEQ2 426 aa6.48□□□□□ -1.37
LINC01249-202ENST00000421212 WIPF1O43516 503 aa6.48□□□□□ -1.37
LINC01249-202ENST00000421212 TJAP1Q5JTD0 557 aa6.48□□□□□ -1.37
LINC01249-202ENST00000421212 IL21Q9HBE4 155 aa6.48□□□□□ -1.37
LINC01249-202ENST00000421212 MAP3K1Q13233 1512 aa6.48□□□□□ -1.37
LINC01249-202ENST00000421212 PREX2Q70Z35 1606 aa6.47□□□□□ -1.37
LINC01249-202ENST00000421212 FAM98CQ17RN3 349 aaKnown RBP6.47□□□□□ -1.37
LINC01249-202ENST00000421212 KIAA1468Q9P260 1216 aa6.47□□□□□ -1.37
LINC01249-202ENST00000421212 SRCAPQ6ZRS2 3230 aa6.47□□□□□ -1.37
LINC01249-202ENST00000421212 NCOA2Q15596 1464 aa6.47□□□□□ -1.37
LINC01249-202ENST00000421212 LRRC9Q6ZRR7 1453 aa6.47□□□□□ -1.37
LINC01249-202ENST00000421212 ABCC1P33527 1531 aa6.46□□□□□ -1.37
LINC01249-202ENST00000421212 UBAP1LF5GYI3 381 aa6.46□□□□□ -1.38
LINC01249-202ENST00000421212 ONECUT3O60422 494 aaPredicted RBP6.46□□□□□ -1.38
LINC01249-202ENST00000421212 PPP4CP60510 307 aa6.46□□□□□ -1.38
LINC01249-202ENST00000421212 SUPT6HQ7KZ85 1726 aaKnown RBP6.46□□□□□ -1.38
LINC01249-202ENST00000421212 AFAP1Q8N556 730 aa6.46□□□□□ -1.38
LINC01249-202ENST00000421212 ANO8Q9HCE9 1232 aaPredicted RBP6.46□□□□□ -1.38
LINC01249-202ENST00000421212 KIAA1107Q9UPP5 1409 aa6.46□□□□□ -1.38
LINC01249-202ENST00000421212 TRAPPC8Q9Y2L5 1435 aa6.46□□□□□ -1.38
LINC01249-202ENST00000421212 ALKQ9UM73 1620 aa6.46□□□□□ -1.38
LINC01249-202ENST00000421212 ITSN2Q9NZM3 1697 aa6.45□□□□□ -1.38
LINC01249-202ENST00000421212 AGLP35573 1532 aa6.45□□□□□ -1.38
LINC01249-202ENST00000421212 GPATCH8Q9UKJ3 1502 aaKnown RBP6.45□□□□□ -1.38
LINC01249-202ENST00000421212 HSPA1LP34931 641 aa6.45□□□□□ -1.38
LINC01249-202ENST00000421212 ESF1Q9H501 851 aaKnown RBP6.45□□□□□ -1.38
LINC01249-202ENST00000421212 SEPT9Q9UHD8 586 aaPredicted RBP6.45□□□□□ -1.38
LINC01249-202ENST00000421212 ZNF142P52746 1687 aaPredicted RBP6.45□□□□□ -1.38
LINC01249-202ENST00000421212 SPAG9O60271 1321 aaKnown RBP6.45□□□□□ -1.38
LINC01249-202ENST00000421212 NCKAP5LQ9HCH0 1330 aa6.45□□□□□ -1.38
LINC01249-202ENST00000421212 SYCP2Q9BX26 1530 aa6.45□□□□□ -1.38
LINC01249-202ENST00000421212 LRRIQ1Q96JM4 1722 aa6.45□□□□□ -1.38
LINC01249-202ENST00000421212 CDC42BPBQ9Y5S2 1711 aa6.45□□□□□ -1.38
LINC01249-202ENST00000421212 KIDINS220Q9ULH0 1771 aa6.44□□□□□ -1.38
LINC01249-202ENST00000421212 MYO3AQ8NEV4 1616 aa6.44□□□□□ -1.38
LINC01249-202ENST00000421212 PPP1R37O75864 691 aa6.44□□□□□ -1.38
LINC01249-202ENST00000421212 RSPH4AQ5TD94 716 aa6.44□□□□□ -1.38
LINC01249-202ENST00000421212 TCOF1Q13428 1488 aaKnown RBP6.44□□□□□ -1.38
LINC01249-202ENST00000421212 MLH3Q9UHC1 1453 aa6.44□□□□□ -1.38
LINC01249-202ENST00000421212 MYOM3Q5VTT5 1437 aa6.43□□□□□ -1.38
LINC01249-202ENST00000421212 MIA2Q96PC5 1412 aa6.43□□□□□ -1.38
LINC01249-202ENST00000421212 CCDC141Q6ZP82 1450 aa6.43□□□□□ -1.38
LINC01249-202ENST00000421212 TSPY4P0CV99 314 aa6.43□□□□□ -1.38
LINC01249-202ENST00000421212 TSPY10P0CW01 314 aa6.43□□□□□ -1.38
LINC01249-202ENST00000421212 SUZ12Q15022 739 aaKnown RBP6.43□□□□□ -1.38
LINC01249-202ENST00000421212 MTRQ99707 1265 aa6.43□□□□□ -1.38
LINC01249-202ENST00000421212 CEP170BQ9Y4F5 1589 aaPredicted RBP6.43□□□□□ -1.38
LINC01249-202ENST00000421212 MROH2AA6NES4 1674 aa6.42□□□□□ -1.38
LINC01249-202ENST00000421212 NPATQ14207 1427 aa6.42□□□□□ -1.38
LINC01249-202ENST00000421212 PLA2R1Q13018 1463 aa6.42□□□□□ -1.38
LINC01249-202ENST00000421212 EVI5O60447 810 aa6.42□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms