RNA–Protein interactions for RNA: ENST00000421182.5

FN1-207, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 8,103 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-207ENST00000421182 SLC52A1Q9NWF4 448 aa13.54□□□□□ -0.24
FN1-207ENST00000421182 RIC3Q7Z5B4 369 aa13.53□□□□□ -0.24
FN1-207ENST00000421182 RUSC2Q8N2Y8 1516 aa13.53□□□□□ -0.24
FN1-207ENST00000421182 TSPYL4Q9UJ04 414 aa13.53□□□□□ -0.24
FN1-207ENST00000421182 ABTB2Q8N961 1025 aa13.53□□□□□ -0.24
FN1-207ENST00000421182 RAD21O60216 631 aa13.53□□□□□ -0.24
FN1-207ENST00000421182 NCOA2Q15596 1464 aa13.53□□□□□ -0.24
FN1-207ENST00000421182 ANKLE2Q86XL3 938 aa13.53□□□□□ -0.24
FN1-207ENST00000421182 R3HCC1Q9Y3T6 440 aaKnown RBP13.53□□□□□ -0.24
FN1-207ENST00000421182 DHX16O60231 1041 aaKnown RBP13.52□□□□□ -0.24
FN1-207ENST00000421182 WWC2Q6AWC2 1192 aa13.52□□□□□ -0.24
FN1-207ENST00000421182 CLUAP1Q96AJ1 413 aa13.52□□□□□ -0.24
FN1-207ENST00000421182 RIPK4P57078 832 aa13.52□□□□□ -0.24
FN1-207ENST00000421182 SKOR2Q2VWA4 1001 aaPredicted RBP13.52□□□□□ -0.24
FN1-207ENST00000421182 PLEKHO1Q53GL0 409 aaPredicted RBP13.52□□□□□ -0.25
FN1-207ENST00000421182 PEG3Q9GZU2 1588 aa13.52□□□□□ -0.25
FN1-207ENST00000421182 FKBP5Q13451 457 aaPredicted RBP13.52□□□□□ -0.25
FN1-207ENST00000421182 NLRP2Q9NX02 1062 aa13.51□□□□□ -0.25
FN1-207ENST00000421182 CCAR1Q8IX12 1150 aaKnown RBP13.51□□□□□ -0.25
FN1-207ENST00000421182 TXNDC2Q86VQ3 553 aa13.51□□□□□ -0.25
FN1-207ENST00000421182 ZNF692Q9BU19 519 aaPredicted RBP13.51□□□□□ -0.25
FN1-207ENST00000421182 RALYLQ86SE5 291 aaKnown RBP13.5□□□□□ -0.25
FN1-207ENST00000421182 GNL3LQ9NVN8 582 aaKnown RBP13.5□□□□□ -0.25
FN1-207ENST00000421182 SART3Q15020 963 aaKnown RBP13.5□□□□□ -0.25
FN1-207ENST00000421182 NFXL1Q6ZNB6 911 aa13.5□□□□□ -0.25
FN1-207ENST00000421182 ZBED9Q6R2W3 1325 aa13.5□□□□□ -0.25
FN1-207ENST00000421182 DAPK1P53355 1430 aa13.5□□□□□ -0.25
FN1-207ENST00000421182 C9orf84Q5VXU9 1444 aa13.5□□□□□ -0.25
FN1-207ENST00000421182 PROSER2Q86WR7 435 aaPredicted RBP13.5□□□□□ -0.25
FN1-207ENST00000421182 KLHL34Q8N239 644 aa13.5□□□□□ -0.25
FN1-207ENST00000421182 HIP1O00291 1037 aa13.49□□□□□ -0.25
FN1-207ENST00000421182 TBC1D2BQ9UPU7 963 aa13.49□□□□□ -0.25
FN1-207ENST00000421182 DMRT2Q9Y5R5 561 aa13.49□□□□□ -0.25
FN1-207ENST00000421182 BECN2A8MW95 431 aa13.49□□□□□ -0.25
FN1-207ENST00000421182 CCDC7Q96M83 1385 aa13.49□□□□□ -0.25
FN1-207ENST00000421182 NLRP6P59044 892 aa13.49□□□□□ -0.25
FN1-207ENST00000421182 CCDC30Q5VVM6 783 aa13.49□□□□□ -0.25
FN1-207ENST00000421182 KIAA0586Q9BVV6 1533 aa13.48□□□□□ -0.25
FN1-207ENST00000421182 MCTP1Q6DN14 999 aa13.48□□□□□ -0.25
FN1-207ENST00000421182 ABCA10Q8WWZ4 1543 aa13.48□□□□□ -0.25
FN1-207ENST00000421182 TEX14Q8IWB6 1497 aa13.48□□□□□ -0.25
FN1-207ENST00000421182 RRP7AQ9Y3A4 280 aaKnown RBP13.48□□□□□ -0.25
FN1-207ENST00000421182 TATP17735 454 aaPredicted RBP13.47□□□□□ -0.25
FN1-207ENST00000421182 ESCO1Q5FWF5 840 aa13.47□□□□□ -0.25
FN1-207ENST00000421182 GOLGA6L3A6NEY3 463 aa13.47□□□□□ -0.25
FN1-207ENST00000421182 RDXP35241 583 aaKnown RBP13.47□□□□□ -0.25
FN1-207ENST00000421182 CD109Q6YHK3 1445 aa13.47□□□□□ -0.25
FN1-207ENST00000421182 INTS3Q68E01 1043 aaKnown RBP13.47□□□□□ -0.25
FN1-207ENST00000421182 ERC1Q8IUD2 1116 aa13.47□□□□□ -0.25
FN1-207ENST00000421182 CNTLNQ9NXG0 1405 aa13.46□□□□□ -0.25
FN1-207ENST00000421182 PNISRQ8TF01 805 aaKnown RBP13.46□□□□□ -0.25
FN1-207ENST00000421182 SLKQ9H2G2 1235 aaPredicted RBP13.46□□□□□ -0.25
FN1-207ENST00000421182 GRIN2AQ12879 1464 aa13.46□□□□□ -0.25
FN1-207ENST00000421182 DZIP1LQ8IYY4 767 aaKnown RBP13.46□□□□□ -0.26
FN1-207ENST00000421182 PSMA5P28066 241 aa13.45□□□□□ -0.26
FN1-207ENST00000421182 CCDC141Q6ZP82 1450 aa13.45□□□□□ -0.26
FN1-207ENST00000421182 ANO2Q9NQ90 1003 aa13.45□□□□□ -0.26
FN1-207ENST00000421182 SPG7Q9UQ90 795 aa13.45□□□□□ -0.26
FN1-207ENST00000421182 RPGRIP1LQ68CZ1 1315 aa13.45□□□□□ -0.26
FN1-207ENST00000421182 GPS2Q13227 327 aa13.45□□□□□ -0.26
FN1-207ENST00000421182 RAPGEF6Q8TEU7 1601 aa13.45□□□□□ -0.26
FN1-207ENST00000421182 UBTFL1P0CB47 393 aaPredicted RBP13.44□□□□□ -0.26
FN1-207ENST00000421182 FAM161AQ3B820 660 aa13.44□□□□□ -0.26
FN1-207ENST00000421182 PTPN23Q9H3S7 1636 aa13.44□□□□□ -0.26
FN1-207ENST00000421182 EPS15P42566 896 aa13.44□□□□□ -0.26
FN1-207ENST00000421182 TROQ12816 1431 aaPredicted RBP13.44□□□□□ -0.26
FN1-207ENST00000421182 CFAP74Q9C0B2 1584 aa13.44□□□□□ -0.26
FN1-207ENST00000421182 PIP4K2BP78356 416 aa13.43□□□□□ -0.26
FN1-207ENST00000421182 CCDC27Q2M243 656 aa13.43□□□□□ -0.26
FN1-207ENST00000421182 ODF2Q5BJF6 829 aa13.43□□□□□ -0.26
FN1-207ENST00000421182 FAM135AQ9P2D6 1515 aa13.43□□□□□ -0.26
FN1-207ENST00000421182 CNTROBQ8N137 903 aa13.43□□□□□ -0.26
FN1-207ENST00000421182 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.43□□□□□ -0.26
FN1-207ENST00000421182 GNAI3P08754 354 aa13.43□□□□□ -0.26
FN1-207ENST00000421182 PCMTD1Q96MG8 357 aaPredicted RBP13.43□□□□□ -0.26
FN1-207ENST00000421182 ELL2O00472 640 aaPredicted RBP13.42□□□□□ -0.26
FN1-207ENST00000421182 NOL8Q76FK4 1167 aaKnown RBP13.42□□□□□ -0.26
FN1-207ENST00000421182 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.42□□□□□ -0.26
FN1-207ENST00000421182 TIAM1Q13009 1591 aa13.42□□□□□ -0.26
FN1-207ENST00000421182 IKQ13123 557 aaPredicted RBP13.41□□□□□ -0.26
FN1-207ENST00000421182 ANKRD30BQ9BXX2 1392 aa13.41□□□□□ -0.26
FN1-207ENST00000421182 MYO5CQ9NQX4 1742 aa13.41□□□□□ -0.26
FN1-207ENST00000421182 NAT10Q9H0A0 1025 aaKnown RBP13.4□□□□□ -0.26
FN1-207ENST00000421182 CLASRPQ8N2M8 674 aaKnown RBP13.4□□□□□ -0.26
FN1-207ENST00000421182 GZF1Q9H116 711 aaPredicted RBP13.4□□□□□ -0.26
FN1-207ENST00000421182 AFAP1Q8N556 730 aa13.4□□□□□ -0.26
FN1-207ENST00000421182 RRP1P56182 461 aaKnown RBP13.4□□□□□ -0.26
FN1-207ENST00000421182 WDHD1O75717 1129 aaPredicted RBP13.4□□□□□ -0.27
FN1-207ENST00000421182 IPO9Q96P70 1041 aaKnown RBP13.39□□□□□ -0.27
FN1-207ENST00000421182 PRKRIP1Q9H875 184 aaPredicted RBP13.39□□□□□ -0.27
FN1-207ENST00000421182 TXLNAP40222 546 aa13.39□□□□□ -0.27
FN1-207ENST00000421182 CT47A1Q5JQC4 288 aaPredicted RBP13.39□□□□□ -0.27
FN1-207ENST00000421182 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.39□□□□□ -0.27
FN1-207ENST00000421182 TOM1L2Q6ZVM7 507 aa13.39□□□□□ -0.27
FN1-207ENST00000421182 BRD4O60885 1362 aaPredicted RBP13.39□□□□□ -0.27
FN1-207ENST00000421182 NEUROD6Q96NK8 337 aa13.39□□□□□ -0.27
FN1-207ENST00000421182 LRPPRCP42704 1394 aaKnown RBP13.39□□□□□ -0.27
FN1-207ENST00000421182 ADGRL1O94910 1474 aa13.39□□□□□ -0.27
FN1-207ENST00000421182 CABP4P57796 275 aa13.38□□□□□ -0.27
FN1-207ENST00000421182 ZNF652Q9Y2D9 606 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms