RNA–Protein interactions for RNA: ENST00000420043.1

PHF3-203, Transcript of PHD finger protein 3, humanhuman

TSL 3

Gene PHF3, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHF3-203ENST00000420043 CCER2I3L3R5 266 aa14.21□□□□□ -0.13
PHF3-203ENST00000420043 C14orf93Q9H972 538 aaKnown RBP14.21□□□□□ -0.13
PHF3-203ENST00000420043 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
PHF3-203ENST00000420043 TMEM131LA2VDJ0 1609 aa14.21□□□□□ -0.13
PHF3-203ENST00000420043 CDCA8Q53HL2 280 aa14.2□□□□□ -0.14
PHF3-203ENST00000420043 FAM135BQ49AJ0 1406 aa14.2□□□□□ -0.14
PHF3-203ENST00000420043 SETBP1Q9Y6X0 1596 aa14.19□□□□□ -0.14
PHF3-203ENST00000420043 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.19□□□□□ -0.14
PHF3-203ENST00000420043 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
PHF3-203ENST00000420043 TESK2Q96S53 571 aa14.19□□□□□ -0.14
PHF3-203ENST00000420043 TBX22Q9Y458 520 aa14.19□□□□□ -0.14
PHF3-203ENST00000420043 SLAIN2Q9P270 581 aa14.18□□□□□ -0.14
PHF3-203ENST00000420043 MSH6P52701 1360 aa14.18□□□□□ -0.14
PHF3-203ENST00000420043 C14orf37Q86TY3 774 aa14.17□□□□□ -0.14
PHF3-203ENST00000420043 RGS17Q9UGC6 210 aaPredicted RBP14.17□□□□□ -0.14
PHF3-203ENST00000420043 NKTRP30414 1462 aaKnown RBP14.17□□□□□ -0.14
PHF3-203ENST00000420043 NWD1Q149M9 1564 aa14.16□□□□□ -0.14
PHF3-203ENST00000420043 ADAMTS13Q76LX8 1427 aa14.15□□□□□ -0.14
PHF3-203ENST00000420043 TRAK1Q9UPV9 953 aa14.15□□□□□ -0.14
PHF3-203ENST00000420043 CENPJQ9HC77 1338 aaPredicted RBP14.15□□□□□ -0.15
PHF3-203ENST00000420043 ROBO1Q9Y6N7 1651 aa14.14□□□□□ -0.15
PHF3-203ENST00000420043 CHD2O14647 1828 aaKnown RBP14.14□□□□□ -0.15
PHF3-203ENST00000420043 TMEM132EQ6IEE7 984 aa14.14□□□□□ -0.15
PHF3-203ENST00000420043 AMOTL2Q9Y2J4 779 aa14.14□□□□□ -0.15
PHF3-203ENST00000420043 PRKRIP1Q9H875 184 aaPredicted RBP14.12□□□□□ -0.15
PHF3-203ENST00000420043 ADGRB1O14514 1584 aa14.12□□□□□ -0.15
PHF3-203ENST00000420043 PTPRUQ92729 1446 aa14.11□□□□□ -0.15
PHF3-203ENST00000420043 ATF3P18847 181 aa14.1□□□□□ -0.15
PHF3-203ENST00000420043 C19orf44Q9H6X5 657 aa14.1□□□□□ -0.15
PHF3-203ENST00000420043 SBNO2Q9Y2G9 1366 aa14.09□□□□□ -0.15
PHF3-203ENST00000420043 CNGB1Q14028 1251 aaPredicted RBP14.09□□□□□ -0.15
PHF3-203ENST00000420043 POTEAQ6S8J7 498 aa14.09□□□□□ -0.15
PHF3-203ENST00000420043 STK26Q9P289 416 aa14.09□□□□□ -0.15
PHF3-203ENST00000420043 CADPS2Q86UW7 1296 aa14.08□□□□□ -0.16
PHF3-203ENST00000420043 PIK3R4Q99570 1358 aa14.08□□□□□ -0.16
PHF3-203ENST00000420043 PANK3Q9H999 370 aa14.07□□□□□ -0.16
PHF3-203ENST00000420043 METP08581 1390 aa14.07□□□□□ -0.16
PHF3-203ENST00000420043 NCOA3Q9Y6Q9 1424 aa14.07□□□□□ -0.16
PHF3-203ENST00000420043 POGKQ9P215 609 aa14.06□□□□□ -0.16
PHF3-203ENST00000420043 KTN1Q86UP2 1357 aaKnown RBP14.06□□□□□ -0.16
PHF3-203ENST00000420043 DIP2AQ14689 1571 aa14.05□□□□□ -0.16
PHF3-203ENST00000420043 PHLPP1O60346 1717 aa14.05□□□□□ -0.16
PHF3-203ENST00000420043 RALBP1Q15311 655 aa14.05□□□□□ -0.16
PHF3-203ENST00000420043 POTEHQ6S545 545 aa14.05□□□□□ -0.16
PHF3-203ENST00000420043 MRS2Q9HD23 443 aa14.05□□□□□ -0.16
PHF3-203ENST00000420043 JCADQ9P266 1359 aa14.05□□□□□ -0.16
PHF3-203ENST00000420043 YTHDC2Q9H6S0 1430 aaKnown RBP14.05□□□□□ -0.16
PHF3-203ENST00000420043 QRICH2Q9H0J4 1663 aa14.04□□□□□ -0.16
PHF3-203ENST00000420043 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.04□□□□□ -0.16
PHF3-203ENST00000420043 EVC2Q86UK5 1308 aa14.04□□□□□ -0.16
PHF3-203ENST00000420043 NRXN3Q9Y4C0 1643 aa14.04□□□□□ -0.16
PHF3-203ENST00000420043 BRINP3Q76B58 766 aa14.03□□□□□ -0.16
PHF3-203ENST00000420043 KNSTRNQ9Y448 316 aa14.03□□□□□ -0.16
PHF3-203ENST00000420043 ASXL1Q8IXJ9 1541 aa14.03□□□□□ -0.16
PHF3-203ENST00000420043 LRPPRCP42704 1394 aaKnown RBP14.02□□□□□ -0.17
PHF3-203ENST00000420043 SAFB2Q14151 953 aaKnown RBP eCLIP14.02□□□□□ -0.17
PHF3-203ENST00000420043 ARHGEF28Q8N1W1 1705 aaKnown RBP14.01□□□□□ -0.17
PHF3-203ENST00000420043 DDX17Q92841 729 aaKnown RBP14.01□□□□□ -0.17
PHF3-203ENST00000420043 PRAM1Q96QH2 718 aa14.01□□□□□ -0.17
PHF3-203ENST00000420043 COL16A1Q07092 1604 aaPredicted RBP14.01□□□□□ -0.17
PHF3-203ENST00000420043 MYBBP1AQ9BQG0 1328 aaKnown RBP14□□□□□ -0.17
PHF3-203ENST00000420043 NUTM2BA6NNL0 878 aaPredicted RBP14□□□□□ -0.17
PHF3-203ENST00000420043 NUTM2EB1AL46 878 aaPredicted RBP14□□□□□ -0.17
PHF3-203ENST00000420043 PER1O15534 1290 aaPredicted RBP14□□□□□ -0.17
PHF3-203ENST00000420043 MEX3CQ5U5Q3 659 aaKnown RBP14□□□□□ -0.17
PHF3-203ENST00000420043 NUTM2AQ8IVF1 878 aaPredicted RBP14□□□□□ -0.17
PHF3-203ENST00000420043 PUS7Q96PZ0 661 aaKnown RBP14□□□□□ -0.17
PHF3-203ENST00000420043 TMC1Q8TDI8 760 aa13.99□□□□□ -0.17
PHF3-203ENST00000420043 MINK1Q8N4C8 1332 aaPredicted RBP13.98□□□□□ -0.17
PHF3-203ENST00000420043 CC2D1BQ5T0F9 858 aaKnown RBP13.98□□□□□ -0.17
PHF3-203ENST00000420043 DLC1Q96QB1 1528 aa13.98□□□□□ -0.17
PHF3-203ENST00000420043 XRN1Q8IZH2 1706 aaKnown RBP13.98□□□□□ -0.17
PHF3-203ENST00000420043 LRP6O75581 1613 aa13.97□□□□□ -0.17
PHF3-203ENST00000420043 ABCC11Q96J66 1382 aa13.97□□□□□ -0.17
PHF3-203ENST00000420043 SPATA31A6Q5VVP1 1343 aa13.97□□□□□ -0.17
PHF3-203ENST00000420043 SRPK2P78362 688 aaKnown RBP13.97□□□□□ -0.17
PHF3-203ENST00000420043 MST1RQ04912 1400 aa13.97□□□□□ -0.17
PHF3-203ENST00000420043 PARD3Q8TEW0 1356 aa13.96□□□□□ -0.17
PHF3-203ENST00000420043 CCDC184Q52MB2 194 aa13.96□□□□□ -0.17
PHF3-203ENST00000420043 FAM9BQ8IZU0 186 aa13.96□□□□□ -0.17
PHF3-203ENST00000420043 BRD4O60885 1362 aaPredicted RBP13.96□□□□□ -0.18
PHF3-203ENST00000420043 AHDC1Q5TGY3 1603 aaPredicted RBP13.95□□□□□ -0.18
PHF3-203ENST00000420043 NLRP13Q86W25 1043 aa13.95□□□□□ -0.18
PHF3-203ENST00000420043 DCCP43146 1447 aa13.95□□□□□ -0.18
PHF3-203ENST00000420043 ATAD2Q6PL18 1390 aa13.95□□□□□ -0.18
PHF3-203ENST00000420043 ROBO2Q9HCK4 1378 aa13.95□□□□□ -0.18
PHF3-203ENST00000420043 TULP4Q9NRJ4 1543 aa13.95□□□□□ -0.18
PHF3-203ENST00000420043 MYOM1P52179 1685 aa13.95□□□□□ -0.18
PHF3-203ENST00000420043 SETD1AO15047 1707 aaKnown RBP13.94□□□□□ -0.18
PHF3-203ENST00000420043 SIRT1Q96EB6 747 aa13.94□□□□□ -0.18
PHF3-203ENST00000420043 ADGRL3Q9HAR2 1447 aa13.94□□□□□ -0.18
PHF3-203ENST00000420043 CABP2Q9NPB3 220 aa13.94□□□□□ -0.18
PHF3-203ENST00000420043 NINLQ9Y2I6 1382 aa13.94□□□□□ -0.18
PHF3-203ENST00000420043 HNRNPUQ00839 825 aaKnown RBP eCLIP13.93□□□□□ -0.18
PHF3-203ENST00000420043 WAPLQ7Z5K2 1190 aa13.93□□□□□ -0.18
PHF3-203ENST00000420043 ORAI2Q96SN7 254 aa13.93□□□□□ -0.18
PHF3-203ENST00000420043 SLC12A5Q9H2X9 1139 aa13.93□□□□□ -0.18
PHF3-203ENST00000420043 NPC1L1Q9UHC9 1359 aa13.93□□□□□ -0.18
PHF3-203ENST00000420043 AMER1Q5JTC6 1135 aaPredicted RBP13.92□□□□□ -0.18
PHF3-203ENST00000420043 LRRC59Q96AG4 307 aaKnown RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms