RNA–Protein interactions for RNA: ENST00000419974.2

SHMT1P1-201, Transcript of serine hydroxymethyltransferase 1 (soluble) pseudogene 1, humanhuman

BASIC

Gene SHMT1P1, Length 1,312 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT1P1-201ENST00000419974 BCANQ96GW7 911 aa19.79■□□□□ 0.76
SHMT1P1-201ENST00000419974 PRAM1Q96QH2 718 aa19.78■□□□□ 0.76
SHMT1P1-201ENST00000419974 SLC26A8Q96RN1 970 aa19.78■□□□□ 0.76
SHMT1P1-201ENST00000419974 QRICH2Q9H0J4 1663 aa19.78■□□□□ 0.76
SHMT1P1-201ENST00000419974 DDX10Q13206 875 aaKnown RBP19.77■□□□□ 0.76
SHMT1P1-201ENST00000419974 XRN1Q8IZH2 1706 aaKnown RBP19.77■□□□□ 0.76
SHMT1P1-201ENST00000419974 STK26Q9P289 416 aa19.76■□□□□ 0.75
SHMT1P1-201ENST00000419974 EVC2Q86UK5 1308 aa19.76■□□□□ 0.75
SHMT1P1-201ENST00000419974 PIP4K2BP78356 416 aa19.76■□□□□ 0.75
SHMT1P1-201ENST00000419974 AMOTL2Q9Y2J4 779 aa19.76■□□□□ 0.75
SHMT1P1-201ENST00000419974 ROBO2Q9HCK4 1378 aa19.75■□□□□ 0.75
SHMT1P1-201ENST00000419974 POGKQ9P215 609 aa19.75■□□□□ 0.75
SHMT1P1-201ENST00000419974 NINLQ9Y2I6 1382 aa19.73■□□□□ 0.75
SHMT1P1-201ENST00000419974 TULP4Q9NRJ4 1543 aa19.73■□□□□ 0.75
SHMT1P1-201ENST00000419974 ADGRB2O60241 1585 aa19.72■□□□□ 0.75
SHMT1P1-201ENST00000419974 NWD1Q149M9 1564 aa19.72■□□□□ 0.75
SHMT1P1-201ENST00000419974 SCAF1Q9H7N4 1312 aaKnown RBP19.72■□□□□ 0.75
SHMT1P1-201ENST00000419974 NKTRP30414 1462 aaKnown RBP19.72■□□□□ 0.75
SHMT1P1-201ENST00000419974 XIRP1Q702N8 1843 aaKnown RBP19.72■□□□□ 0.75
SHMT1P1-201ENST00000419974 HSPA1LP34931 641 aa19.72■□□□□ 0.75
SHMT1P1-201ENST00000419974 CHD2O14647 1828 aaKnown RBP19.71■□□□□ 0.75
SHMT1P1-201ENST00000419974 PROSER2Q86WR7 435 aaPredicted RBP19.71■□□□□ 0.75
SHMT1P1-201ENST00000419974 TMEM94Q12767 1356 aa19.7■□□□□ 0.74
SHMT1P1-201ENST00000419974 ATAD2Q6PL18 1390 aa19.69■□□□□ 0.74
SHMT1P1-201ENST00000419974 PLEKHH1Q9ULM0 1364 aa19.69■□□□□ 0.74
SHMT1P1-201ENST00000419974 WAPLQ7Z5K2 1190 aa19.69■□□□□ 0.74
SHMT1P1-201ENST00000419974 NCOA3Q9Y6Q9 1424 aa19.67■□□□□ 0.74
SHMT1P1-201ENST00000419974 SENP3Q9H4L4 574 aaPredicted RBP19.67■□□□□ 0.74
SHMT1P1-201ENST00000419974 PER1O15534 1290 aaPredicted RBP19.66■□□□□ 0.74
SHMT1P1-201ENST00000419974 WASLO00401 505 aaPredicted RBP19.65■□□□□ 0.74
SHMT1P1-201ENST00000419974 MINK1Q8N4C8 1332 aaPredicted RBP19.64■□□□□ 0.73
SHMT1P1-201ENST00000419974 MYOM1P52179 1685 aa19.63■□□□□ 0.73
SHMT1P1-201ENST00000419974 KTN1Q86UP2 1357 aaKnown RBP19.63■□□□□ 0.73
SHMT1P1-201ENST00000419974 CDK19Q9BWU1 502 aa19.63■□□□□ 0.73
SHMT1P1-201ENST00000419974 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.62■□□□□ 0.73
SHMT1P1-201ENST00000419974 NPC1L1Q9UHC9 1359 aa19.62■□□□□ 0.73
SHMT1P1-201ENST00000419974 MSH6P52701 1360 aa19.61■□□□□ 0.73
SHMT1P1-201ENST00000419974 SAFB2Q14151 953 aaKnown RBP eCLIP19.61■□□□□ 0.73
SHMT1P1-201ENST00000419974 PANK3Q9H999 370 aa19.6■□□□□ 0.73
SHMT1P1-201ENST00000419974 RBM33Q96EV2 1170 aaKnown RBP19.59■□□□□ 0.73
SHMT1P1-201ENST00000419974 ANKRD36BQ8N2N9 1353 aa19.59■□□□□ 0.73
SHMT1P1-201ENST00000419974 ANP32CO43423 234 aa19.58■□□□□ 0.73
SHMT1P1-201ENST00000419974 SRPK2P78362 688 aaKnown RBP19.58■□□□□ 0.73
SHMT1P1-201ENST00000419974 POLR3GLQ9BT43 218 aa19.58■□□□□ 0.73
SHMT1P1-201ENST00000419974 CABP2Q9NPB3 220 aa19.58■□□□□ 0.73
SHMT1P1-201ENST00000419974 ANKARQ7Z5J8 1434 aa19.57■□□□□ 0.72
SHMT1P1-201ENST00000419974 ADGRL3Q9HAR2 1447 aa19.57■□□□□ 0.72
SHMT1P1-201ENST00000419974 CDC42BPGQ6DT37 1551 aa19.57■□□□□ 0.72
SHMT1P1-201ENST00000419974 ATP7BP35670 1465 aa19.56■□□□□ 0.72
SHMT1P1-201ENST00000419974 MIER1Q8N108 512 aa19.56■□□□□ 0.72
SHMT1P1-201ENST00000419974 SLAIN2Q9P270 581 aa19.56■□□□□ 0.72
SHMT1P1-201ENST00000419974 CCDC61Q9Y6R9 512 aa19.56■□□□□ 0.72
SHMT1P1-201ENST00000419974 C19orf44Q9H6X5 657 aa19.55■□□□□ 0.72
SHMT1P1-201ENST00000419974 PRKRIP1Q9H875 184 aaPredicted RBP19.55■□□□□ 0.72
SHMT1P1-201ENST00000419974 CCER2I3L3R5 266 aa19.54■□□□□ 0.72
SHMT1P1-201ENST00000419974 SLC12A5Q9H2X9 1139 aa19.54■□□□□ 0.72
SHMT1P1-201ENST00000419974 PLEKHG3A1L390 1219 aa19.53■□□□□ 0.72
SHMT1P1-201ENST00000419974 ILDR2Q71H61 639 aa19.53■□□□□ 0.72
SHMT1P1-201ENST00000419974 NUDT16Q96DE0 195 aaKnown RBP19.53■□□□□ 0.72
SHMT1P1-201ENST00000419974 DCCP43146 1447 aa19.53■□□□□ 0.72
SHMT1P1-201ENST00000419974 AMER1Q5JTC6 1135 aaPredicted RBP19.52■□□□□ 0.72
SHMT1P1-201ENST00000419974 TERF2IPQ9NYB0 399 aa19.52■□□□□ 0.72
SHMT1P1-201ENST00000419974 CD163L1Q9NR16 1453 aa19.52■□□□□ 0.72
SHMT1P1-201ENST00000419974 CPSF1Q10570 1443 aaKnown RBP19.52■□□□□ 0.72
SHMT1P1-201ENST00000419974 RALBP1Q15311 655 aa19.51■□□□□ 0.71
SHMT1P1-201ENST00000419974 CADPS2Q86UW7 1296 aa19.51■□□□□ 0.71
SHMT1P1-201ENST00000419974 CARD14Q9BXL6 1004 aa19.51■□□□□ 0.71
SHMT1P1-201ENST00000419974 KNSTRNQ9Y448 316 aa19.51■□□□□ 0.71
SHMT1P1-201ENST00000419974 USP32Q8NFA0 1604 aa19.51■□□□□ 0.71
SHMT1P1-201ENST00000419974 ROBO1Q9Y6N7 1651 aa19.5■□□□□ 0.71
SHMT1P1-201ENST00000419974 MED1Q15648 1581 aaPredicted RBP19.5■□□□□ 0.71
SHMT1P1-201ENST00000419974 PARD3Q8TEW0 1356 aa19.5■□□□□ 0.71
SHMT1P1-201ENST00000419974 ZNF692Q9BU19 519 aaPredicted RBP19.5■□□□□ 0.71
SHMT1P1-201ENST00000419974 PRR36Q9H6K5 1346 aa19.49■□□□□ 0.71
SHMT1P1-201ENST00000419974 TOPAZ1Q8N9V7 1692 aa19.49■□□□□ 0.71
SHMT1P1-201ENST00000419974 NSD2O96028 1365 aa19.49■□□□□ 0.71
SHMT1P1-201ENST00000419974 C14orf37Q86TY3 774 aa19.49■□□□□ 0.71
SHMT1P1-201ENST00000419974 TMC1Q8TDI8 760 aa19.49■□□□□ 0.71
SHMT1P1-201ENST00000419974 CABP1Q9NZU7 370 aa19.49■□□□□ 0.71
SHMT1P1-201ENST00000419974 PPIP5K1Q6PFW1 1433 aa19.48■□□□□ 0.71
SHMT1P1-201ENST00000419974 NALCNQ8IZF0 1738 aa19.48■□□□□ 0.71
SHMT1P1-201ENST00000419974 A0A1W2PP64 1363 aa19.48■□□□□ 0.71
SHMT1P1-201ENST00000419974 ATF3P18847 181 aa19.48■□□□□ 0.71
SHMT1P1-201ENST00000419974 HDGFL2Q7Z4V5 671 aaPredicted RBP19.48■□□□□ 0.71
SHMT1P1-201ENST00000419974 FMN2Q9NZ56 1722 aa19.47■□□□□ 0.71
SHMT1P1-201ENST00000419974 POLR3AO14802 1390 aaPredicted RBP19.46■□□□□ 0.71
SHMT1P1-201ENST00000419974 BRD4O60885 1362 aaPredicted RBP19.44■□□□□ 0.7
SHMT1P1-201ENST00000419974 NSD3Q9BZ95 1437 aa19.44■□□□□ 0.7
SHMT1P1-201ENST00000419974 SOCS7O14512 581 aa19.44■□□□□ 0.7
SHMT1P1-201ENST00000419974 CGNL1Q0VF96 1302 aa19.44■□□□□ 0.7
SHMT1P1-201ENST00000419974 EDC4Q6P2E9 1401 aaKnown RBP19.43■□□□□ 0.7
SHMT1P1-201ENST00000419974 ITSN1Q15811 1721 aa19.43■□□□□ 0.7
SHMT1P1-201ENST00000419974 MYBBP1AQ9BQG0 1328 aaKnown RBP19.41■□□□□ 0.7
SHMT1P1-201ENST00000419974 SSH2Q76I76 1423 aa19.41■□□□□ 0.7
SHMT1P1-201ENST00000419974 PHF23Q9BUL5 403 aaPredicted RBP19.39■□□□□ 0.69
SHMT1P1-201ENST00000419974 AKAP12Q02952 1782 aa19.38■□□□□ 0.69
SHMT1P1-201ENST00000419974 ACEP12821 1306 aa19.38■□□□□ 0.69
SHMT1P1-201ENST00000419974 PHLPP1O60346 1717 aa19.37■□□□□ 0.69
SHMT1P1-201ENST00000419974 MON2Q7Z3U7 1717 aa19.37■□□□□ 0.69
SHMT1P1-201ENST00000419974 USP6P35125 1406 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms