RNA–Protein interactions for RNA: ENST00000419964.1

EPHA4-205, Transcript of EPH receptor A4, humanhuman

TSL 4

Gene EPHA4, Length 552 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-205ENST00000419964 BEGAINQ9BUH8 593 aa10.86□□□□□ -0.67
EPHA4-205ENST00000419964 SEPT9Q9UHD8 586 aaPredicted RBP10.86□□□□□ -0.67
EPHA4-205ENST00000419964 EIF4G3O43432 1585 aaKnown RBP10.85□□□□□ -0.67
EPHA4-205ENST00000419964 TIAM1Q13009 1591 aa10.85□□□□□ -0.67
EPHA4-205ENST00000419964 CASKIN1Q8WXD9 1431 aa10.84□□□□□ -0.67
EPHA4-205ENST00000419964 RSPH4AQ5TD94 716 aa10.84□□□□□ -0.67
EPHA4-205ENST00000419964 ADGRD1Q6QNK2 874 aa10.84□□□□□ -0.67
EPHA4-205ENST00000419964 GTF3C3Q9Y5Q9 886 aa10.84□□□□□ -0.67
EPHA4-205ENST00000419964 IQGAP2Q13576 1575 aa10.84□□□□□ -0.67
EPHA4-205ENST00000419964 BHMG1C9JSJ3 638 aaPredicted RBP10.83□□□□□ -0.68
EPHA4-205ENST00000419964 SLC4A3P48751 1232 aa10.83□□□□□ -0.68
EPHA4-205ENST00000419964 MRPL50Q8N5N7 158 aaKnown RBP10.83□□□□□ -0.68
EPHA4-205ENST00000419964 CFAP43Q8NDM7 1665 aa10.82□□□□□ -0.68
EPHA4-205ENST00000419964 DDX11L8A8MPP1 907 aa10.82□□□□□ -0.68
EPHA4-205ENST00000419964 STAC3Q96MF2 364 aa10.82□□□□□ -0.68
EPHA4-205ENST00000419964 RSPH6AQ9H0K4 717 aa10.82□□□□□ -0.68
EPHA4-205ENST00000419964 GOPCQ9HD26 462 aa10.82□□□□□ -0.68
EPHA4-205ENST00000419964 KIAA0586Q9BVV6 1533 aa10.81□□□□□ -0.68
EPHA4-205ENST00000419964 ZNF608Q9ULD9 1512 aaPredicted RBP10.81□□□□□ -0.68
EPHA4-205ENST00000419964 ANKRD13DQ6ZTN6 518 aa10.81□□□□□ -0.68
EPHA4-205ENST00000419964 SYNJ2O15056 1496 aa10.81□□□□□ -0.68
EPHA4-205ENST00000419964 DIXDC1Q155Q3 683 aa10.8□□□□□ -0.68
EPHA4-205ENST00000419964 SWT1Q5T5J6 900 aaKnown RBP10.8□□□□□ -0.68
EPHA4-205ENST00000419964 PCF11O94913 1555 aaKnown RBP10.8□□□□□ -0.68
EPHA4-205ENST00000419964 GRIN2AQ12879 1464 aa10.8□□□□□ -0.68
EPHA4-205ENST00000419964 SNAPC4Q5SXM2 1469 aa10.8□□□□□ -0.68
EPHA4-205ENST00000419964 UGGT2Q9NYU1 1516 aa10.79□□□□□ -0.68
EPHA4-205ENST00000419964 FHOD3Q2V2M9 1422 aa10.79□□□□□ -0.68
EPHA4-205ENST00000419964 RRBP1Q9P2E9 1410 aaKnown RBP10.79□□□□□ -0.68
EPHA4-205ENST00000419964 CD46P15529 392 aa10.79□□□□□ -0.68
EPHA4-205ENST00000419964 LRRC9Q6ZRR7 1453 aa10.79□□□□□ -0.68
EPHA4-205ENST00000419964 RDH13Q8NBN7 331 aa10.78□□□□□ -0.68
EPHA4-205ENST00000419964 CCDC18Q5T9S5 1454 aa10.78□□□□□ -0.68
EPHA4-205ENST00000419964 TTBK1Q5TCY1 1321 aaPredicted RBP10.78□□□□□ -0.68
EPHA4-205ENST00000419964 HRO43593 1189 aa10.77□□□□□ -0.69
EPHA4-205ENST00000419964 SH3D19Q5HYK7 790 aa10.77□□□□□ -0.69
EPHA4-205ENST00000419964 SAMD7Q7Z3H4 446 aa10.77□□□□□ -0.69
EPHA4-205ENST00000419964 SLF2Q8IX21 1173 aa10.77□□□□□ -0.69
EPHA4-205ENST00000419964 ZFRQ96KR1 1074 aaKnown RBP10.77□□□□□ -0.69
EPHA4-205ENST00000419964 GOLGA8CPA6NN73 597 aa10.76□□□□□ -0.69
EPHA4-205ENST00000419964 CCER1Q8TC90 406 aaPredicted RBP10.76□□□□□ -0.69
EPHA4-205ENST00000419964 KANK4Q5T7N3 995 aaPredicted RBP10.75□□□□□ -0.69
EPHA4-205ENST00000419964 NUTM1Q86Y26 1132 aa10.75□□□□□ -0.69
EPHA4-205ENST00000419964 CHMP7Q8WUX9 453 aaPredicted RBP10.75□□□□□ -0.69
EPHA4-205ENST00000419964 PCMTD1Q96MG8 357 aaPredicted RBP10.75□□□□□ -0.69
EPHA4-205ENST00000419964 HECW1Q76N89 1606 aa10.75□□□□□ -0.69
EPHA4-205ENST00000419964 CCNB3Q8WWL7 1395 aa10.75□□□□□ -0.69
EPHA4-205ENST00000419964 SKIV2LQ15477 1246 aaKnown RBP10.74□□□□□ -0.69
EPHA4-205ENST00000419964 TBC1D2Q9BYX2 928 aa10.74□□□□□ -0.69
EPHA4-205ENST00000419964 NECTIN2Q92692 538 aa10.73□□□□□ -0.69
EPHA4-205ENST00000419964 LRCH3Q96II8 777 aa10.73□□□□□ -0.69
EPHA4-205ENST00000419964 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP10.73□□□□□ -0.69
EPHA4-205ENST00000419964 POTEGQ6S5H5 508 aa10.72□□□□□ -0.69
EPHA4-205ENST00000419964 ANKK1Q8NFD2 765 aa10.72□□□□□ -0.69
EPHA4-205ENST00000419964 KRTAP3-3Q9BYR6 98 aa10.72□□□□□ -0.69
EPHA4-205ENST00000419964 KRTAP3-2Q9BYR7 98 aa10.72□□□□□ -0.69
EPHA4-205ENST00000419964 CARMIL2Q6F5E8 1435 aa10.72□□□□□ -0.69
EPHA4-205ENST00000419964 RNF40O75150 1001 aa10.71□□□□□ -0.69
EPHA4-205ENST00000419964 SLC10A3P09131 477 aa10.71□□□□□ -0.69
EPHA4-205ENST00000419964 GCGRP47871 477 aa10.71□□□□□ -0.69
EPHA4-205ENST00000419964 NUP160Q12769 1436 aa10.71□□□□□ -0.69
EPHA4-205ENST00000419964 MYSM1Q5VVJ2 828 aa10.71□□□□□ -0.69
EPHA4-205ENST00000419964 EHBP1L1Q8N3D4 1523 aa10.71□□□□□ -0.69
EPHA4-205ENST00000419964 SPIRE2Q8WWL2 714 aa10.71□□□□□ -0.69
EPHA4-205ENST00000419964 CDKN2AIPQ9NXV6 580 aaPredicted RBP10.71□□□□□ -0.69
EPHA4-205ENST00000419964 ATP1B4Q9UN42 357 aaPredicted RBP10.71□□□□□ -0.69
EPHA4-205ENST00000419964 KIAA0556O60303 1618 aa10.7□□□□□ -0.7
EPHA4-205ENST00000419964 MTUS2Q5JR59 1369 aa10.7□□□□□ -0.7
EPHA4-205ENST00000419964 CLSPNQ9HAW4 1339 aa10.7□□□□□ -0.7
EPHA4-205ENST00000419964 KDM4AO75164 1064 aa10.7□□□□□ -0.7
EPHA4-205ENST00000419964 USP46P62068 366 aa10.7□□□□□ -0.7
EPHA4-205ENST00000419964 POLR3EQ9NVU0 708 aa10.7□□□□□ -0.7
EPHA4-205ENST00000419964 POTEMA6NI47 508 aa10.69□□□□□ -0.7
EPHA4-205ENST00000419964 ERICH6Q7L0X2 663 aa10.69□□□□□ -0.7
EPHA4-205ENST00000419964 CDAN1Q8IWY9 1227 aa10.68□□□□□ -0.7
EPHA4-205ENST00000419964 SUPT6HQ7KZ85 1726 aaKnown RBP10.67□□□□□ -0.7
EPHA4-205ENST00000419964 CLK2P49760 499 aaKnown RBP10.67□□□□□ -0.7
EPHA4-205ENST00000419964 WNT2BQ93097 391 aa10.67□□□□□ -0.7
EPHA4-205ENST00000419964 CDK11AQ9UQ88 783 aaPredicted RBP10.67□□□□□ -0.7
EPHA4-205ENST00000419964 CEP170Q5SW79 1584 aa10.66□□□□□ -0.7
EPHA4-205ENST00000419964 SOWAHBA6NEL2 793 aa10.66□□□□□ -0.7
EPHA4-205ENST00000419964 CFHP08603 1231 aa10.66□□□□□ -0.7
EPHA4-205ENST00000419964 GJA5P36382 358 aa10.66□□□□□ -0.7
EPHA4-205ENST00000419964 RIC3Q7Z5B4 369 aa10.66□□□□□ -0.7
EPHA4-205ENST00000419964 DISP1Q96F81 1524 aa10.66□□□□□ -0.7
EPHA4-205ENST00000419964 KMT5BQ4FZB7 885 aa10.65□□□□□ -0.7
EPHA4-205ENST00000419964 GRIPAP1Q4V328 841 aa10.65□□□□□ -0.7
EPHA4-205ENST00000419964 EPRSP07814 1512 aaKnown RBP10.64□□□□□ -0.71
EPHA4-205ENST00000419964 SPTLC1O15269 473 aa10.64□□□□□ -0.71
EPHA4-205ENST00000419964 PROCA1Q8NCQ7 364 aaPredicted RBP10.64□□□□□ -0.71
EPHA4-205ENST00000419964 PRR14Q9BWN1 585 aa10.64□□□□□ -0.71
EPHA4-205ENST00000419964 PHLDB1Q86UU1 1377 aa10.64□□□□□ -0.71
EPHA4-205ENST00000419964 ACIN1Q9UKV3 1341 aaKnown RBP10.63□□□□□ -0.71
EPHA4-205ENST00000419964 RAPGEF6Q8TEU7 1601 aa10.63□□□□□ -0.71
EPHA4-205ENST00000419964 MOXD2PA6NHM9 499 aa10.63□□□□□ -0.71
EPHA4-205ENST00000419964 PPP4CP60510 307 aa10.63□□□□□ -0.71
EPHA4-205ENST00000419964 TUSC1Q2TAM9 212 aa10.63□□□□□ -0.71
EPHA4-205ENST00000419964 RSBN1LQ6PCB5 846 aaPredicted RBP10.63□□□□□ -0.71
EPHA4-205ENST00000419964 MYOM3Q5VTT5 1437 aa10.62□□□□□ -0.71
EPHA4-205ENST00000419964 HOXA2O43364 376 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms