RNA–Protein interactions for RNA: ENST00000419023.2

VPS45-203, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 3

Gene VPS45, Length 977 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-203ENST00000419023 ATP1B4Q9UN42 357 aaPredicted RBP10.65□□□□□ -0.7
VPS45-203ENST00000419023 PCDHGC3Q9UN70 934 aa10.65□□□□□ -0.7
VPS45-203ENST00000419023 CSPP1Q1MSJ5 1256 aa10.64□□□□□ -0.71
VPS45-203ENST00000419023 ZPR1O75312 459 aa10.63□□□□□ -0.71
VPS45-203ENST00000419023 PROCA1Q8NCQ7 364 aaPredicted RBP10.63□□□□□ -0.71
VPS45-203ENST00000419023 PCDHB15Q9Y5E8 787 aa10.63□□□□□ -0.71
VPS45-203ENST00000419023 SCRIBQ14160 1630 aa10.62□□□□□ -0.71
VPS45-203ENST00000419023 TLL1O43897 1013 aa10.61□□□□□ -0.71
VPS45-203ENST00000419023 ITGBL1O95965 494 aaPredicted RBP10.61□□□□□ -0.71
VPS45-203ENST00000419023 GJA5P36382 358 aa10.61□□□□□ -0.71
VPS45-203ENST00000419023 KCNC4Q03721 635 aa10.61□□□□□ -0.71
VPS45-203ENST00000419023 TMEM132AQ24JP5 1023 aa10.61□□□□□ -0.71
VPS45-203ENST00000419023 RNF19BQ6ZMZ0 732 aa10.61□□□□□ -0.71
VPS45-203ENST00000419023 SYMPKQ92797 1274 aaKnown RBP10.61□□□□□ -0.71
VPS45-203ENST00000419023 PCMTD1Q96MG8 357 aaPredicted RBP10.61□□□□□ -0.71
VPS45-203ENST00000419023 GOPCQ9HD26 462 aa10.61□□□□□ -0.71
VPS45-203ENST00000419023 DCAF1Q9Y4B6 1507 aa10.61□□□□□ -0.71
VPS45-203ENST00000419023 Q3C1V9 767 aa10.6□□□□□ -0.71
VPS45-203ENST00000419023 C6orf229H3BNL8 230 aa10.59□□□□□ -0.71
VPS45-203ENST00000419023 FMNL1O95466 1100 aaPredicted RBP10.59□□□□□ -0.71
VPS45-203ENST00000419023 BRICD5Q6PL45 260 aa10.59□□□□□ -0.71
VPS45-203ENST00000419023 THAP11Q96EK4 314 aa10.59□□□□□ -0.71
VPS45-203ENST00000419023 ZCCHC6Q5VYS8 1495 aaKnown RBP10.58□□□□□ -0.72
VPS45-203ENST00000419023 NKX2-3Q8TAU0 364 aa10.58□□□□□ -0.72
VPS45-203ENST00000419023 CABLES1Q8TDN4 633 aa10.58□□□□□ -0.72
VPS45-203ENST00000419023 HRCP23327 699 aa10.57□□□□□ -0.72
VPS45-203ENST00000419023 QPCTQ16769 361 aa10.57□□□□□ -0.72
VPS45-203ENST00000419023 TUSC1Q2TAM9 212 aa10.57□□□□□ -0.72
VPS45-203ENST00000419023 SPSB2Q99619 263 aa10.57□□□□□ -0.72
VPS45-203ENST00000419023 SALL2Q9Y467 1007 aaPredicted RBP10.57□□□□□ -0.72
VPS45-203ENST00000419023 MTMR2Q13614 643 aa10.56□□□□□ -0.72
VPS45-203ENST00000419023 GNL3Q9BVP2 549 aaKnown RBP eCLIP10.56□□□□□ -0.72
VPS45-203ENST00000419023 ZBTB3Q9H5J0 574 aa10.56□□□□□ -0.72
VPS45-203ENST00000419023 PLA2G2EQ9NZK7 142 aa10.56□□□□□ -0.72
VPS45-203ENST00000419023 NUTM2BA6NNL0 878 aaPredicted RBP10.55□□□□□ -0.72
VPS45-203ENST00000419023 NUTM2EB1AL46 878 aaPredicted RBP10.55□□□□□ -0.72
VPS45-203ENST00000419023 NUTM2DQ5VT03 806 aaPredicted RBP10.55□□□□□ -0.72
VPS45-203ENST00000419023 PRPF38BQ5VTL8 546 aaKnown RBP10.55□□□□□ -0.72
VPS45-203ENST00000419023 NUTM2AQ8IVF1 878 aaPredicted RBP10.55□□□□□ -0.72
VPS45-203ENST00000419023 LILRB3O75022 631 aa10.54□□□□□ -0.72
VPS45-203ENST00000419023 ADH1BP00325 375 aa10.54□□□□□ -0.72
VPS45-203ENST00000419023 FBXO31Q5XUX0 539 aaPredicted RBP10.54□□□□□ -0.72
VPS45-203ENST00000419023 USB1Q9BQ65 265 aaKnown RBP10.54□□□□□ -0.72
VPS45-203ENST00000419023 RTL5Q5HYW3 569 aaPredicted RBP10.53□□□□□ -0.72
VPS45-203ENST00000419023 RETREG3Q86VR2 466 aa10.53□□□□□ -0.72
VPS45-203ENST00000419023 FAM160A2Q8N612 972 aaPredicted RBP10.53□□□□□ -0.72
VPS45-203ENST00000419023 SPDYE5A6NIY4 337 aa10.51□□□□□ -0.73
VPS45-203ENST00000419023 PRR7Q8TB68 274 aa10.51□□□□□ -0.73
VPS45-203ENST00000419023 SLC6A16Q9GZN6 736 aa10.5□□□□□ -0.73
VPS45-203ENST00000419023 PRDM9Q9NQV7 894 aa10.5□□□□□ -0.73
VPS45-203ENST00000419023 CFAP99D6REC4 459 aa10.49□□□□□ -0.73
VPS45-203ENST00000419023 S1PR4O95977 384 aa10.49□□□□□ -0.73
VPS45-203ENST00000419023 MSS51Q4VC12 460 aa10.49□□□□□ -0.73
VPS45-203ENST00000419023 PPP2R2DQ66LE6 453 aa10.49□□□□□ -0.73
VPS45-203ENST00000419023 IFFO2Q5TF58 517 aa10.48□□□□□ -0.73
VPS45-203ENST00000419023 TSC1Q92574 1164 aa10.48□□□□□ -0.73
VPS45-203ENST00000419023 CUX2O14529 1486 aa10.48□□□□□ -0.73
VPS45-203ENST00000419023 RFC5P40937 340 aa10.47□□□□□ -0.73
VPS45-203ENST00000419023 ERCC6Q03468 1493 aa10.47□□□□□ -0.73
VPS45-203ENST00000419023 JUNDP17535 347 aa10.45□□□□□ -0.74
VPS45-203ENST00000419023 PPP1R18Q6NYC8 613 aa10.45□□□□□ -0.74
VPS45-203ENST00000419023 PPEF1O14829 653 aaPredicted RBP10.44□□□□□ -0.74
VPS45-203ENST00000419023 MMP16P51512 607 aa10.44□□□□□ -0.74
VPS45-203ENST00000419023 AP1G2O75843 785 aa10.43□□□□□ -0.74
VPS45-203ENST00000419023 DXOO77932 396 aaKnown RBP10.43□□□□□ -0.74
VPS45-203ENST00000419023 GGCXP38435 758 aa10.43□□□□□ -0.74
VPS45-203ENST00000419023 HELBQ8NG08 1087 aaPredicted RBP10.43□□□□□ -0.74
VPS45-203ENST00000419023 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.43□□□□□ -0.74
VPS45-203ENST00000419023 DESI1Q6ICB0 168 aa10.42□□□□□ -0.74
VPS45-203ENST00000419023 A0A0G2JS52 829 aa10.41□□□□□ -0.74
VPS45-203ENST00000419023 RNF223E7ERA6 249 aa10.41□□□□□ -0.74
VPS45-203ENST00000419023 CTDSPL2Q05D32 466 aa10.41□□□□□ -0.74
VPS45-203ENST00000419023 TMEM259Q4ZIN3 620 aa10.4□□□□□ -0.74
VPS45-203ENST00000419023 FCF1Q9Y324 198 aaKnown RBP10.4□□□□□ -0.74
VPS45-203ENST00000419023 PER1O15534 1290 aaPredicted RBP10.39□□□□□ -0.75
VPS45-203ENST00000419023 LYPD8Q6UX82 237 aa10.39□□□□□ -0.75
VPS45-203ENST00000419023 CCDC24Q8N4L8 307 aa10.38□□□□□ -0.75
VPS45-203ENST00000419023 NUDT12Q9BQG2 462 aa10.38□□□□□ -0.75
VPS45-203ENST00000419023 PTPRNQ16849 979 aa10.37□□□□□ -0.75
VPS45-203ENST00000419023 ANKLE1Q8NAG6 615 aa10.37□□□□□ -0.75
VPS45-203ENST00000419023 USP17L8P0C7I0 530 aa10.36□□□□□ -0.75
VPS45-203ENST00000419023 LRRN4Q8WUT4 740 aa10.36□□□□□ -0.75
VPS45-203ENST00000419023 CCNYL3P0C7X3 344 aa10.35□□□□□ -0.75
VPS45-203ENST00000419023 PLA2G2CQ5R387 149 aa10.34□□□□□ -0.75
VPS45-203ENST00000419023 CTHP32929 405 aa10.33□□□□□ -0.76
VPS45-203ENST00000419023 BANK1Q8NDB2 785 aa10.33□□□□□ -0.76
VPS45-203ENST00000419023 EVA1BQ9NVM1 165 aa10.33□□□□□ -0.76
VPS45-203ENST00000419023 SNRKQ9NRH2 765 aa10.32□□□□□ -0.76
VPS45-203ENST00000419023 MAP10Q9P2G4 905 aa10.32□□□□□ -0.76
VPS45-203ENST00000419023 F12P00748 615 aaPredicted RBP10.31□□□□□ -0.76
VPS45-203ENST00000419023 KCNH2Q12809 1159 aa10.31□□□□□ -0.76
VPS45-203ENST00000419023 PTCRAQ6ISU1 281 aaPredicted RBP10.31□□□□□ -0.76
VPS45-203ENST00000419023 HMX1Q9NP08 348 aaPredicted RBP10.31□□□□□ -0.76
VPS45-203ENST00000419023 GTF3C3Q9Y5Q9 886 aa10.3□□□□□ -0.76
VPS45-203ENST00000419023 NR6A1Q15406 480 aa10.29□□□□□ -0.76
VPS45-203ENST00000419023 NCAPD3P42695 1498 aa10.29□□□□□ -0.76
VPS45-203ENST00000419023 ZBTB24O43167 697 aaPredicted RBP10.28□□□□□ -0.76
VPS45-203ENST00000419023 LIAT1Q6ZQX7 453 aa10.28□□□□□ -0.76
VPS45-203ENST00000419023 MTMR14Q8NCE2 650 aa10.28□□□□□ -0.76
VPS45-203ENST00000419023 EPS8L1Q8TE68 723 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms