RNA–Protein interactions for RNA: ENST00000418653.5

SNAP47-204, Transcript of synaptosome associated protein 47, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene SNAP47, Length 1,867 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAP47-204ENST00000418653 DEFB132Q7Z7B7 95 aa17.73■□□□□ 0.43
SNAP47-204ENST00000418653 SLIT2O94813 1529 aa17.73■□□□□ 0.43
SNAP47-204ENST00000418653 CHGAP10645 457 aaKnown RBP17.73■□□□□ 0.43
SNAP47-204ENST00000418653 METP08581 1390 aa17.71■□□□□ 0.42
SNAP47-204ENST00000418653 KANK4Q5T7N3 995 aaPredicted RBP17.7■□□□□ 0.42
SNAP47-204ENST00000418653 PXDNQ92626 1479 aa17.7■□□□□ 0.42
SNAP47-204ENST00000418653 RGPD1P0DJD0 1748 aa17.69■□□□□ 0.42
SNAP47-204ENST00000418653 NPHP3Q7Z494 1330 aa17.69■□□□□ 0.42
SNAP47-204ENST00000418653 PPARGC1BQ86YN6 1023 aaKnown RBP17.69■□□□□ 0.42
SNAP47-204ENST00000418653 NWD2Q9ULI1 1742 aa17.68■□□□□ 0.42
SNAP47-204ENST00000418653 UNC5CLQ8IV45 518 aa17.68■□□□□ 0.42
SNAP47-204ENST00000418653 BAG6P46379 1132 aa17.67■□□□□ 0.42
SNAP47-204ENST00000418653 CDC42BPGQ6DT37 1551 aa17.67■□□□□ 0.42
SNAP47-204ENST00000418653 USP32Q8NFA0 1604 aa17.66■□□□□ 0.42
SNAP47-204ENST00000418653 YY1P25490 414 aa17.65■□□□□ 0.42
SNAP47-204ENST00000418653 CHIC2Q9UKJ5 165 aa17.65■□□□□ 0.42
SNAP47-204ENST00000418653 DISP2A7MBM2 1401 aa17.64■□□□□ 0.42
SNAP47-204ENST00000418653 ORAI2Q96SN7 254 aa17.64■□□□□ 0.41
SNAP47-204ENST00000418653 PSDA5PKW4 1024 aaPredicted RBP17.63■□□□□ 0.41
SNAP47-204ENST00000418653 ONECUT3O60422 494 aaPredicted RBP17.63■□□□□ 0.41
SNAP47-204ENST00000418653 HFM1A2PYH4 1435 aa17.63■□□□□ 0.41
SNAP47-204ENST00000418653 NEXMIFQ5QGS0 1516 aa17.62■□□□□ 0.41
SNAP47-204ENST00000418653 LRPPRCP42704 1394 aaKnown RBP17.62■□□□□ 0.41
SNAP47-204ENST00000418653 SEPT12Q8IYM1 358 aa17.62■□□□□ 0.41
SNAP47-204ENST00000418653 PLCH1Q4KWH8 1693 aa17.61■□□□□ 0.41
SNAP47-204ENST00000418653 VPS72Q15906 364 aa17.6■□□□□ 0.41
SNAP47-204ENST00000418653 KRT27Q7Z3Y8 459 aa17.6■□□□□ 0.41
SNAP47-204ENST00000418653 KIF1AQ12756 1690 aa17.58■□□□□ 0.41
SNAP47-204ENST00000418653 TNS1Q9HBL0 1735 aaKnown RBP17.58■□□□□ 0.41
SNAP47-204ENST00000418653 ADGRB2O60241 1585 aa17.58■□□□□ 0.4
SNAP47-204ENST00000418653 ROBO2Q9HCK4 1378 aa17.57■□□□□ 0.4
SNAP47-204ENST00000418653 ABCA3Q99758 1704 aa17.54■□□□□ 0.4
SNAP47-204ENST00000418653 CCDC144AA2RUR9 1427 aa17.53■□□□□ 0.4
SNAP47-204ENST00000418653 IFFO2Q5TF58 517 aa17.53■□□□□ 0.4
SNAP47-204ENST00000418653 PARD3Q8TEW0 1356 aa17.53■□□□□ 0.4
SNAP47-204ENST00000418653 NRAPQ86VF7 1730 aa17.52■□□□□ 0.4
SNAP47-204ENST00000418653 R3HDM1Q15032 1099 aaKnown RBP17.52■□□□□ 0.39
SNAP47-204ENST00000418653 KIF1BO60333 1816 aa17.52■□□□□ 0.39
SNAP47-204ENST00000418653 SPATA31A3Q5VYP0 1347 aa17.51■□□□□ 0.39
SNAP47-204ENST00000418653 ZNF326Q5BKZ1 582 aaKnown RBP17.51■□□□□ 0.39
SNAP47-204ENST00000418653 ROCK1Q13464 1354 aa17.5■□□□□ 0.39
SNAP47-204ENST00000418653 NINLQ9Y2I6 1382 aa17.5■□□□□ 0.39
SNAP47-204ENST00000418653 ESCO1Q5FWF5 840 aa17.5■□□□□ 0.39
SNAP47-204ENST00000418653 RREB1Q92766 1687 aa17.5■□□□□ 0.39
SNAP47-204ENST00000418653 CLTCL1P53675 1640 aa17.49■□□□□ 0.39
SNAP47-204ENST00000418653 DCAF8L1A6NGE4 600 aa17.48■□□□□ 0.39
SNAP47-204ENST00000418653 EN1Q05925 392 aaPredicted RBP17.48■□□□□ 0.39
SNAP47-204ENST00000418653 FMN2Q9NZ56 1722 aa17.47■□□□□ 0.39
SNAP47-204ENST00000418653 THSD7AQ9UPZ6 1657 aa17.47■□□□□ 0.39
SNAP47-204ENST00000418653 FOXO3O43524 673 aa17.47■□□□□ 0.39
SNAP47-204ENST00000418653 TNS3Q68CZ2 1445 aa17.47■□□□□ 0.39
SNAP47-204ENST00000418653 NUP155O75694 1391 aa17.46■□□□□ 0.39
SNAP47-204ENST00000418653 NAIPQ13075 1403 aa17.45■□□□□ 0.38
SNAP47-204ENST00000418653 TECPR2O15040 1411 aa17.44■□□□□ 0.38
SNAP47-204ENST00000418653 NUP188Q5SRE5 1749 aa17.44■□□□□ 0.38
SNAP47-204ENST00000418653 KNDC1Q76NI1 1749 aa17.43■□□□□ 0.38
SNAP47-204ENST00000418653 CCDC9Q9Y3X0 531 aaKnown RBP17.43■□□□□ 0.38
SNAP47-204ENST00000418653 VGFO15240 615 aaPredicted RBP17.42■□□□□ 0.38
SNAP47-204ENST00000418653 XPCQ01831 940 aaPredicted RBP17.42■□□□□ 0.38
SNAP47-204ENST00000418653 APLP2Q06481 763 aa17.42■□□□□ 0.38
SNAP47-204ENST00000418653 COL14A1Q05707 1796 aaKnown RBP17.42■□□□□ 0.38
SNAP47-204ENST00000418653 SBNO1A3KN83 1393 aa17.41■□□□□ 0.38
SNAP47-204ENST00000418653 ARHGEF10O15013 1369 aa17.41■□□□□ 0.38
SNAP47-204ENST00000418653 PPLO60437 1756 aa17.4■□□□□ 0.38
SNAP47-204ENST00000418653 CAMKK2Q96RR4 588 aa17.4■□□□□ 0.38
SNAP47-204ENST00000418653 HAP1P54257 671 aaPredicted RBP17.39■□□□□ 0.38
SNAP47-204ENST00000418653 RRBP1Q9P2E9 1410 aaKnown RBP17.39■□□□□ 0.37
SNAP47-204ENST00000418653 RPGRIP1LQ68CZ1 1315 aa17.39■□□□□ 0.37
SNAP47-204ENST00000418653 A0A0G2JS52 829 aa17.38■□□□□ 0.37
SNAP47-204ENST00000418653 MYT1Q01538 1121 aa17.38■□□□□ 0.37
SNAP47-204ENST00000418653 EZH2Q15910 746 aaKnown RBP17.38■□□□□ 0.37
SNAP47-204ENST00000418653 PSME1Q06323 249 aa17.37■□□□□ 0.37
SNAP47-204ENST00000418653 FAM50AQ14320 339 aaKnown RBP17.37■□□□□ 0.37
SNAP47-204ENST00000418653 FAM98CQ17RN3 349 aaKnown RBP17.37■□□□□ 0.37
SNAP47-204ENST00000418653 KRT28Q7Z3Y7 464 aa17.36■□□□□ 0.37
SNAP47-204ENST00000418653 IFT172Q9UG01 1749 aa17.36■□□□□ 0.37
SNAP47-204ENST00000418653 SPON1Q9HCB6 807 aa17.35■□□□□ 0.37
SNAP47-204ENST00000418653 SENP3-EIF4A1A0A087X0R7 540 aa17.35■□□□□ 0.37
SNAP47-204ENST00000418653 PPP1R1BQ9UD71 204 aaPredicted RBP17.35■□□□□ 0.37
SNAP47-204ENST00000418653 NRXN1Q9ULB1 1477 aa17.35■□□□□ 0.37
SNAP47-204ENST00000418653 CAMTA1Q9Y6Y1 1673 aa17.35■□□□□ 0.37
SNAP47-204ENST00000418653 CHD4Q14839 1912 aa17.34■□□□□ 0.37
SNAP47-204ENST00000418653 RGPD3A6NKT7 1758 aaPredicted RBP17.34■□□□□ 0.37
SNAP47-204ENST00000418653 RGPD4Q7Z3J3 1758 aa17.34■□□□□ 0.37
SNAP47-204ENST00000418653 NBPF8Q3BBV2 869 aa17.33■□□□□ 0.37
SNAP47-204ENST00000418653 NBPF14Q5TI25 921 aa17.33■□□□□ 0.37
SNAP47-204ENST00000418653 ZNF784Q8NCA9 323 aaPredicted RBP17.33■□□□□ 0.37
SNAP47-204ENST00000418653 SPATA31A5Q5VU36 1347 aa17.33■□□□□ 0.36
SNAP47-204ENST00000418653 SPATA31A7Q8IWB4 1347 aa17.33■□□□□ 0.36
SNAP47-204ENST00000418653 FAM196AQ6ZSG2 479 aa17.33■□□□□ 0.36
SNAP47-204ENST00000418653 FAM83GA6ND36 823 aa17.31■□□□□ 0.36
SNAP47-204ENST00000418653 KCNQ2O43526 872 aa17.31■□□□□ 0.36
SNAP47-204ENST00000418653 ABCC11Q96J66 1382 aa17.3■□□□□ 0.36
SNAP47-204ENST00000418653 C1QTNF8P60827 252 aa17.3■□□□□ 0.36
SNAP47-204ENST00000418653 RGPD8O14715 1765 aaPredicted RBP17.3■□□□□ 0.36
SNAP47-204ENST00000418653 TRPM3Q9HCF6 1732 aaPredicted RBP17.29■□□□□ 0.36
SNAP47-204ENST00000418653 ALS2Q96Q42 1657 aa17.29■□□□□ 0.36
SNAP47-204ENST00000418653 CRYBG1Q9Y4K1 1723 aa17.29■□□□□ 0.36
SNAP47-204ENST00000418653 CASZ1Q86V15 1759 aa17.29■□□□□ 0.36
SNAP47-204ENST00000418653 CCER1Q8TC90 406 aaPredicted RBP17.29■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms