RNA–Protein interactions for RNA: ENST00000418518.2

LINCMD1-201, Transcript of long intergenic non-protein coding RNA, muscle differentiation 1, humanhuman

TSL 5 BASIC

Gene LINCMD1, Length 462 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINCMD1-201ENST00000418518 TMEM2Q9UHN6 1383 aa12.2□□□□□ -0.46
LINCMD1-201ENST00000418518 CARD14Q9BXL6 1004 aa12.2□□□□□ -0.46
LINCMD1-201ENST00000418518 STAG3Q9UJ98 1225 aa12.2□□□□□ -0.46
LINCMD1-201ENST00000418518 ADGRB2O60241 1585 aa12.2□□□□□ -0.46
LINCMD1-201ENST00000418518 MED14O60244 1454 aa12.2□□□□□ -0.46
LINCMD1-201ENST00000418518 FAM135BQ49AJ0 1406 aa12.2□□□□□ -0.46
LINCMD1-201ENST00000418518 ZNF142P52746 1687 aaPredicted RBP12.19□□□□□ -0.46
LINCMD1-201ENST00000418518 DIP2AQ14689 1571 aa12.19□□□□□ -0.46
LINCMD1-201ENST00000418518 NEFLP07196 543 aa12.18□□□□□ -0.46
LINCMD1-201ENST00000418518 CNGB1Q14028 1251 aaPredicted RBP12.18□□□□□ -0.46
LINCMD1-201ENST00000418518 CD163L1Q9NR16 1453 aa12.18□□□□□ -0.46
LINCMD1-201ENST00000418518 PLEKHG1Q9ULL1 1385 aa12.18□□□□□ -0.46
LINCMD1-201ENST00000418518 ADAMTSL3P82987 1691 aa12.17□□□□□ -0.46
LINCMD1-201ENST00000418518 SIRT1Q96EB6 747 aa12.17□□□□□ -0.46
LINCMD1-201ENST00000418518 NUDCQ9Y266 331 aa12.17□□□□□ -0.46
LINCMD1-201ENST00000418518 ADAMTS13Q76LX8 1427 aa12.17□□□□□ -0.46
LINCMD1-201ENST00000418518 AKAP12Q02952 1782 aa12.17□□□□□ -0.46
LINCMD1-201ENST00000418518 MON2Q7Z3U7 1717 aa12.17□□□□□ -0.46
LINCMD1-201ENST00000418518 POLR3AO14802 1390 aaPredicted RBP12.17□□□□□ -0.46
LINCMD1-201ENST00000418518 ATP7BP35670 1465 aa12.16□□□□□ -0.46
LINCMD1-201ENST00000418518 HDGFP51858 240 aaKnown RBP12.16□□□□□ -0.46
LINCMD1-201ENST00000418518 ERICH6BQ5W0A0 696 aa12.16□□□□□ -0.46
LINCMD1-201ENST00000418518 RIMS1Q86UR5 1692 aaKnown RBP12.16□□□□□ -0.46
LINCMD1-201ENST00000418518 TOPAZ1Q8N9V7 1692 aa12.16□□□□□ -0.46
LINCMD1-201ENST00000418518 RNF123Q5XPI4 1314 aa12.15□□□□□ -0.46
LINCMD1-201ENST00000418518 PDE3BQ13370 1112 aa12.15□□□□□ -0.46
LINCMD1-201ENST00000418518 FKBP8Q14318 412 aa12.15□□□□□ -0.46
LINCMD1-201ENST00000418518 ITSN1Q15811 1721 aa12.14□□□□□ -0.47
LINCMD1-201ENST00000418518 PRAM1Q96QH2 718 aa12.14□□□□□ -0.47
LINCMD1-201ENST00000418518 SLC12A5Q9H2X9 1139 aa12.14□□□□□ -0.47
LINCMD1-201ENST00000418518 A0A1W2PP64 1363 aa12.14□□□□□ -0.47
LINCMD1-201ENST00000418518 METP08581 1390 aa12.14□□□□□ -0.47
LINCMD1-201ENST00000418518 XRN1Q8IZH2 1706 aaKnown RBP12.14□□□□□ -0.47
LINCMD1-201ENST00000418518 CEP170BQ9Y4F5 1589 aaPredicted RBP12.13□□□□□ -0.47
LINCMD1-201ENST00000418518 CGNL1Q0VF96 1302 aa12.13□□□□□ -0.47
LINCMD1-201ENST00000418518 SETD1BQ9UPS6 1966 aaKnown RBP12.13□□□□□ -0.47
LINCMD1-201ENST00000418518 STK26Q9P289 416 aa12.12□□□□□ -0.47
LINCMD1-201ENST00000418518 CDC42BPGQ6DT37 1551 aa12.12□□□□□ -0.47
LINCMD1-201ENST00000418518 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.11□□□□□ -0.47
LINCMD1-201ENST00000418518 PLEKHH1Q9ULM0 1364 aa12.11□□□□□ -0.47
LINCMD1-201ENST00000418518 CABP2Q9NPB3 220 aa12.11□□□□□ -0.47
LINCMD1-201ENST00000418518 POGKQ9P215 609 aa12.11□□□□□ -0.47
LINCMD1-201ENST00000418518 MINK1Q8N4C8 1332 aaPredicted RBP12.11□□□□□ -0.47
LINCMD1-201ENST00000418518 NRKQ7Z2Y5 1582 aa12.1□□□□□ -0.47
LINCMD1-201ENST00000418518 PTCH1Q13635 1447 aa12.1□□□□□ -0.47
LINCMD1-201ENST00000418518 ADAMTS8Q9UP79 889 aa12.09□□□□□ -0.47
LINCMD1-201ENST00000418518 CPSF1Q10570 1443 aaKnown RBP12.09□□□□□ -0.47
LINCMD1-201ENST00000418518 COL3A1P02461 1466 aaPredicted RBP12.08□□□□□ -0.47
LINCMD1-201ENST00000418518 IQSEC2Q5JU85 1478 aa12.08□□□□□ -0.47
LINCMD1-201ENST00000418518 TRHP20396 242 aaPredicted RBP12.08□□□□□ -0.48
LINCMD1-201ENST00000418518 WDR43Q15061 677 aaKnown RBP eCLIP12.08□□□□□ -0.48
LINCMD1-201ENST00000418518 NGEFQ8N5V2 710 aa12.08□□□□□ -0.48
LINCMD1-201ENST00000418518 CDK19Q9BWU1 502 aa12.08□□□□□ -0.48
LINCMD1-201ENST00000418518 TERF2IPQ9NYB0 399 aa12.08□□□□□ -0.48
LINCMD1-201ENST00000418518 ZNF521Q96K83 1311 aa12.08□□□□□ -0.48
LINCMD1-201ENST00000418518 LTKP29376 864 aa12.07□□□□□ -0.48
LINCMD1-201ENST00000418518 SRPK2P78362 688 aaKnown RBP12.07□□□□□ -0.48
LINCMD1-201ENST00000418518 SAFB2Q14151 953 aaKnown RBP eCLIP12.07□□□□□ -0.48
LINCMD1-201ENST00000418518 MORC1Q86VD1 984 aa12.07□□□□□ -0.48
LINCMD1-201ENST00000418518 PTPRUQ92729 1446 aa12.07□□□□□ -0.48
LINCMD1-201ENST00000418518 CHD2O14647 1828 aaKnown RBP12.06□□□□□ -0.48
LINCMD1-201ENST00000418518 MAP2P11137 1827 aaKnown RBP12.06□□□□□ -0.48
LINCMD1-201ENST00000418518 ROBO2Q9HCK4 1378 aa12.05□□□□□ -0.48
LINCMD1-201ENST00000418518 EDC4Q6P2E9 1401 aaKnown RBP12.05□□□□□ -0.48
LINCMD1-201ENST00000418518 WASLO00401 505 aaPredicted RBP12.05□□□□□ -0.48
LINCMD1-201ENST00000418518 CEBPAP49715 358 aaPredicted RBP12.05□□□□□ -0.48
LINCMD1-201ENST00000418518 PELP1Q8IZL8 1130 aaKnown RBP12.05□□□□□ -0.48
LINCMD1-201ENST00000418518 DNAJC5Q9H3Z4 198 aa12.05□□□□□ -0.48
LINCMD1-201ENST00000418518 NALCNQ8IZF0 1738 aa12.05□□□□□ -0.48
LINCMD1-201ENST00000418518 PIK3R4Q99570 1358 aa12.05□□□□□ -0.48
LINCMD1-201ENST00000418518 HDGFL2Q7Z4V5 671 aaPredicted RBP12.04□□□□□ -0.48
LINCMD1-201ENST00000418518 WAPLQ7Z5K2 1190 aa12.04□□□□□ -0.48
LINCMD1-201ENST00000418518 TBX22Q9Y458 520 aa12.04□□□□□ -0.48
LINCMD1-201ENST00000418518 PPIP5K1Q6PFW1 1433 aa12.03□□□□□ -0.48
LINCMD1-201ENST00000418518 NCBP3Q53F19 620 aaKnown RBP12.03□□□□□ -0.48
LINCMD1-201ENST00000418518 THEMISQ8N1K5 641 aaPredicted RBP12.03□□□□□ -0.48
LINCMD1-201ENST00000418518 EID1Q9Y6B2 187 aa12.03□□□□□ -0.48
LINCMD1-201ENST00000418518 TXNDC2Q86VQ3 553 aa12.02□□□□□ -0.49
LINCMD1-201ENST00000418518 USP54Q70EL1 1684 aa12.02□□□□□ -0.49
LINCMD1-201ENST00000418518 FMN2Q9NZ56 1722 aa12.02□□□□□ -0.49
LINCMD1-201ENST00000418518 PNPLA6Q8IY17 1366 aa12.02□□□□□ -0.49
LINCMD1-201ENST00000418518 FYB1O15117 783 aa12.01□□□□□ -0.49
LINCMD1-201ENST00000418518 SENP3Q9H4L4 574 aaPredicted RBP12.01□□□□□ -0.49
LINCMD1-201ENST00000418518 PPP4R2Q9NY27 417 aa12.01□□□□□ -0.49
LINCMD1-201ENST00000418518 RGPD8O14715 1765 aaPredicted RBP12□□□□□ -0.49
LINCMD1-201ENST00000418518 BCANQ96GW7 911 aa12□□□□□ -0.49
LINCMD1-201ENST00000418518 CFAP53Q96M91 514 aa12□□□□□ -0.49
LINCMD1-201ENST00000418518 CABP1Q9NZU7 370 aa12□□□□□ -0.49
LINCMD1-201ENST00000418518 MTHFSP49914 203 aa11.99□□□□□ -0.49
LINCMD1-201ENST00000418518 TRMT2AQ8IZ69 625 aaKnown RBP11.99□□□□□ -0.49
LINCMD1-201ENST00000418518 NKTRP30414 1462 aaKnown RBP11.99□□□□□ -0.49
LINCMD1-201ENST00000418518 LRRC7Q96NW7 1537 aa11.99□□□□□ -0.49
LINCMD1-201ENST00000418518 CDK12Q9NYV4 1490 aaPredicted RBP11.98□□□□□ -0.49
LINCMD1-201ENST00000418518 AATKQ6ZMQ8 1374 aa11.98□□□□□ -0.49
LINCMD1-201ENST00000418518 PRR36Q9H6K5 1346 aa11.98□□□□□ -0.49
LINCMD1-201ENST00000418518 NUDT16Q96DE0 195 aaKnown RBP11.98□□□□□ -0.49
LINCMD1-201ENST00000418518 CDCA7LQ96GN5 454 aa11.98□□□□□ -0.49
LINCMD1-201ENST00000418518 PHF23Q9BUL5 403 aaPredicted RBP11.98□□□□□ -0.49
LINCMD1-201ENST00000418518 RCAN3Q9UKA8 241 aa11.98□□□□□ -0.49
LINCMD1-201ENST00000418518 CCDC61Q9Y6R9 512 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms