RNA–Protein interactions for RNA: ENST00000417996.2

KRT3-201, Transcript of keratin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT3, Length 2,319 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT3-201ENST00000417996 NGEFQ8N5V2 710 aa26.49■■□□□ 1.83
KRT3-201ENST00000417996 RRP7AQ9Y3A4 280 aaKnown RBP26.48■■□□□ 1.83
KRT3-201ENST00000417996 ABCC3O15438 1527 aa26.48■■□□□ 1.83
KRT3-201ENST00000417996 RGS3P49796 1198 aa26.48■■□□□ 1.83
KRT3-201ENST00000417996 RPGRIP1LQ68CZ1 1315 aa26.47■■□□□ 1.83
KRT3-201ENST00000417996 SHPRHQ149N8 1683 aa26.47■■□□□ 1.83
KRT3-201ENST00000417996 RAPGEF3O95398 923 aa26.45■■□□□ 1.82
KRT3-201ENST00000417996 FAM161AQ3B820 660 aa26.44■■□□□ 1.82
KRT3-201ENST00000417996 DDRGK1Q96HY6 314 aa26.44■■□□□ 1.82
KRT3-201ENST00000417996 CANXP27824 592 aaKnown RBP26.43■■□□□ 1.82
KRT3-201ENST00000417996 RUNDC1Q96C34 613 aa26.43■■□□□ 1.82
KRT3-201ENST00000417996 MTHFSP49914 203 aa26.43■■□□□ 1.82
KRT3-201ENST00000417996 C8orf34Q49A92 452 aa26.43■■□□□ 1.82
KRT3-201ENST00000417996 CGNL1Q0VF96 1302 aa26.42■■□□□ 1.82
KRT3-201ENST00000417996 SENP3Q9H4L4 574 aaPredicted RBP26.42■■□□□ 1.82
KRT3-201ENST00000417996 CAMSAP1Q5T5Y3 1602 aa26.42■■□□□ 1.82
KRT3-201ENST00000417996 SIGLEC1Q9BZZ2 1709 aa26.42■■□□□ 1.82
KRT3-201ENST00000417996 TCP11L2Q8N4U5 519 aa26.41■■□□□ 1.82
KRT3-201ENST00000417996 GLI2P10070 1586 aa26.41■■□□□ 1.82
KRT3-201ENST00000417996 PANK1Q8TE04 598 aa26.4■■□□□ 1.82
KRT3-201ENST00000417996 NEFMP07197 916 aa26.39■■□□□ 1.82
KRT3-201ENST00000417996 EVC2Q86UK5 1308 aa26.39■■□□□ 1.82
KRT3-201ENST00000417996 IGHDP01880 384 aa26.39■■□□□ 1.81
KRT3-201ENST00000417996 SAFB2Q14151 953 aaKnown RBP eCLIP26.39■■□□□ 1.81
KRT3-201ENST00000417996 VGFO15240 615 aaPredicted RBP26.38■■□□□ 1.81
KRT3-201ENST00000417996 FRAT1Q92837 279 aaPredicted RBP26.38■■□□□ 1.81
KRT3-201ENST00000417996 PDE3AQ14432 1141 aa26.38■■□□□ 1.81
KRT3-201ENST00000417996 COG6Q9Y2V7 657 aa26.38■■□□□ 1.81
KRT3-201ENST00000417996 CFAP53Q96M91 514 aa26.37■■□□□ 1.81
KRT3-201ENST00000417996 CABP2Q9NPB3 220 aa26.37■■□□□ 1.81
KRT3-201ENST00000417996 USP32Q8NFA0 1604 aa26.36■■□□□ 1.81
KRT3-201ENST00000417996 IQSEC2Q5JU85 1478 aa26.36■■□□□ 1.81
KRT3-201ENST00000417996 TULP4Q9NRJ4 1543 aa26.36■■□□□ 1.81
KRT3-201ENST00000417996 SLC4A3P48751 1232 aa26.36■■□□□ 1.81
KRT3-201ENST00000417996 ARHGEF28Q8N1W1 1705 aaKnown RBP26.35■■□□□ 1.81
KRT3-201ENST00000417996 NEXMIFQ5QGS0 1516 aa26.35■■□□□ 1.81
KRT3-201ENST00000417996 PIK3C2BO00750 1634 aa26.33■■□□□ 1.81
KRT3-201ENST00000417996 ANKRD36BQ8N2N9 1353 aa26.33■■□□□ 1.81
KRT3-201ENST00000417996 PPM1GO15355 546 aaPredicted RBP26.33■■□□□ 1.81
KRT3-201ENST00000417996 CLUAP1Q96AJ1 413 aa26.33■■□□□ 1.81
KRT3-201ENST00000417996 NINLQ9Y2I6 1382 aa26.33■■□□□ 1.8
KRT3-201ENST00000417996 RARSP54136 660 aaKnown RBP26.32■■□□□ 1.8
KRT3-201ENST00000417996 IDI1Q13907 227 aa26.32■■□□□ 1.8
KRT3-201ENST00000417996 STK26Q9P289 416 aa26.32■■□□□ 1.8
KRT3-201ENST00000417996 PHF23Q9BUL5 403 aaPredicted RBP26.31■■□□□ 1.8
KRT3-201ENST00000417996 DIP2CQ9Y2E4 1556 aa26.3■■□□□ 1.8
KRT3-201ENST00000417996 WDR63Q8IWG1 891 aa26.3■■□□□ 1.8
KRT3-201ENST00000417996 U2AF1L5P0DN76 240 aaPredicted RBP26.3■■□□□ 1.8
KRT3-201ENST00000417996 U2AF1Q01081 240 aaKnown RBP eCLIP26.3■■□□□ 1.8
KRT3-201ENST00000417996 BCL2L13Q9BXK5 485 aa26.3■■□□□ 1.8
KRT3-201ENST00000417996 DAXXQ9UER7 740 aaPredicted RBP26.3■■□□□ 1.8
KRT3-201ENST00000417996 NEO1Q92859 1461 aa26.29■■□□□ 1.8
KRT3-201ENST00000417996 PUS7Q96PZ0 661 aaKnown RBP26.29■■□□□ 1.8
KRT3-201ENST00000417996 USP35Q9P2H5 1018 aa26.27■■□□□ 1.8
KRT3-201ENST00000417996 TNNQ9UQP3 1299 aa26.27■■□□□ 1.8
KRT3-201ENST00000417996 NSD2O96028 1365 aa26.26■■□□□ 1.8
KRT3-201ENST00000417996 SRPK2P78362 688 aaKnown RBP26.26■■□□□ 1.79
KRT3-201ENST00000417996 CCDC27Q2M243 656 aa26.25■■□□□ 1.79
KRT3-201ENST00000417996 RLBP1P12271 317 aa26.24■■□□□ 1.79
KRT3-201ENST00000417996 A0A1W2PP64 1363 aa26.23■■□□□ 1.79
KRT3-201ENST00000417996 ARHGAP31Q2M1Z3 1444 aa26.23■■□□□ 1.79
KRT3-201ENST00000417996 GGNBP2Q9H3C7 697 aa26.22■■□□□ 1.79
KRT3-201ENST00000417996 YEATS2Q9ULM3 1422 aa26.21■■□□□ 1.79
KRT3-201ENST00000417996 MYH16Q9H6N6 1097 aa26.21■■□□□ 1.79
KRT3-201ENST00000417996 SLC52A1Q9NWF4 448 aa26.21■■□□□ 1.79
KRT3-201ENST00000417996 MINK1Q8N4C8 1332 aaPredicted RBP26.19■■□□□ 1.78
KRT3-201ENST00000417996 MYO5BQ9ULV0 1848 aa26.19■■□□□ 1.78
KRT3-201ENST00000417996 U2SURPO15042 1029 aaKnown RBP26.19■■□□□ 1.78
KRT3-201ENST00000417996 PCDHB15Q9Y5E8 787 aa26.19■■□□□ 1.78
KRT3-201ENST00000417996 ABCC11Q96J66 1382 aa26.18■■□□□ 1.78
KRT3-201ENST00000417996 MAPK8IP3Q9UPT6 1336 aa26.18■■□□□ 1.78
KRT3-201ENST00000417996 RICTORQ6R327 1708 aa26.18■■□□□ 1.78
KRT3-201ENST00000417996 PRAM1Q96QH2 718 aa26.17■■□□□ 1.78
KRT3-201ENST00000417996 ZFYVE9O95405 1425 aa26.17■■□□□ 1.78
KRT3-201ENST00000417996 PMFBP1Q8TBY8 1022 aa26.16■■□□□ 1.78
KRT3-201ENST00000417996 CYB5RLQ6IPT4 315 aa26.15■■□□□ 1.78
KRT3-201ENST00000417996 TSR2Q969E8 191 aaKnown RBP26.15■■□□□ 1.78
KRT3-201ENST00000417996 POGKQ9P215 609 aa26.15■■□□□ 1.78
KRT3-201ENST00000417996 ADGRB2O60241 1585 aa26.15■■□□□ 1.78
KRT3-201ENST00000417996 NFKBIBQ15653 356 aa26.15■■□□□ 1.78
KRT3-201ENST00000417996 VIRMAQ69YN4 1812 aaKnown RBP26.14■■□□□ 1.77
KRT3-201ENST00000417996 PTPRMP28827 1452 aa26.13■■□□□ 1.77
KRT3-201ENST00000417996 SEC24BO95487 1268 aa26.13■■□□□ 1.77
KRT3-201ENST00000417996 PREX1Q8TCU6 1659 aa26.12■■□□□ 1.77
KRT3-201ENST00000417996 TMEM131LA2VDJ0 1609 aa26.12■■□□□ 1.77
KRT3-201ENST00000417996 FYB1O15117 783 aa26.11■■□□□ 1.77
KRT3-201ENST00000417996 NCBP3Q53F19 620 aaKnown RBP26.11■■□□□ 1.77
KRT3-201ENST00000417996 FBXO31Q5XUX0 539 aaPredicted RBP26.11■■□□□ 1.77
KRT3-201ENST00000417996 PLEKHF1Q96S99 279 aa26.11■■□□□ 1.77
KRT3-201ENST00000417996 TERF2IPQ9NYB0 399 aa26.11■■□□□ 1.77
KRT3-201ENST00000417996 USP19O94966 1318 aa26.11■■□□□ 1.77
KRT3-201ENST00000417996 AAMPQ13685 434 aa26.11■■□□□ 1.77
KRT3-201ENST00000417996 ATAD2Q6PL18 1390 aa26.11■■□□□ 1.77
KRT3-201ENST00000417996 YTHDC2Q9H6S0 1430 aaKnown RBP26.1■■□□□ 1.77
KRT3-201ENST00000417996 TMPOP42166 694 aaKnown RBP26.09■■□□□ 1.77
KRT3-201ENST00000417996 RIMBP3CA6NJZ7 1639 aa26.09■■□□□ 1.77
KRT3-201ENST00000417996 RIMBP3BA6NNM3 1639 aa26.09■■□□□ 1.77
KRT3-201ENST00000417996 RIMBP3Q9UFD9 1639 aa26.09■■□□□ 1.77
KRT3-201ENST00000417996 EXOSC9Q06265 439 aaKnown RBP26.08■■□□□ 1.77
KRT3-201ENST00000417996 ZKSCAN2Q63HK3 967 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms