RNA–Protein interactions for RNA: ENST00000417413.7

RAB3IP-205, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,613 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-205ENST00000417413 ABCC11Q96J66 1382 aa25.97■■□□□ 1.75
RAB3IP-205ENST00000417413 POGKQ9P215 609 aa25.96■■□□□ 1.75
RAB3IP-205ENST00000417413 PPP2R1AP30153 589 aa25.95■■□□□ 1.74
RAB3IP-205ENST00000417413 METP08581 1390 aa25.94■■□□□ 1.74
RAB3IP-205ENST00000417413 CABP2Q9NPB3 220 aa25.93■■□□□ 1.74
RAB3IP-205ENST00000417413 MINK1Q8N4C8 1332 aaPredicted RBP25.93■■□□□ 1.74
RAB3IP-205ENST00000417413 SLIT1O75093 1534 aa25.92■■□□□ 1.74
RAB3IP-205ENST00000417413 TXNDC2Q86VQ3 553 aa25.92■■□□□ 1.74
RAB3IP-205ENST00000417413 ARHGAP23Q9P227 1491 aa25.92■■□□□ 1.74
RAB3IP-205ENST00000417413 CEP170BQ9Y4F5 1589 aaPredicted RBP25.92■■□□□ 1.74
RAB3IP-205ENST00000417413 NSD3Q9BZ95 1437 aa25.92■■□□□ 1.74
RAB3IP-205ENST00000417413 BCANQ96GW7 911 aa25.91■■□□□ 1.74
RAB3IP-205ENST00000417413 ADAMTS13Q76LX8 1427 aa25.9■■□□□ 1.74
RAB3IP-205ENST00000417413 PLEKHG1Q9ULL1 1385 aa25.9■■□□□ 1.74
RAB3IP-205ENST00000417413 INSRP06213 1382 aa25.89■■□□□ 1.74
RAB3IP-205ENST00000417413 ANKRD36BQ8N2N9 1353 aa25.89■■□□□ 1.74
RAB3IP-205ENST00000417413 NINLQ9Y2I6 1382 aa25.89■■□□□ 1.74
RAB3IP-205ENST00000417413 LTKP29376 864 aa25.89■■□□□ 1.74
RAB3IP-205ENST00000417413 TECPR2O15040 1411 aa25.89■■□□□ 1.74
RAB3IP-205ENST00000417413 SETD1BQ9UPS6 1966 aaKnown RBP25.88■■□□□ 1.73
RAB3IP-205ENST00000417413 PLEKHH1Q9ULM0 1364 aa25.88■■□□□ 1.73
RAB3IP-205ENST00000417413 CPS1P31327 1500 aa25.88■■□□□ 1.73
RAB3IP-205ENST00000417413 ATAD2Q6PL18 1390 aa25.87■■□□□ 1.73
RAB3IP-205ENST00000417413 WAPLQ7Z5K2 1190 aa25.87■■□□□ 1.73
RAB3IP-205ENST00000417413 SRPK2P78362 688 aaKnown RBP25.86■■□□□ 1.73
RAB3IP-205ENST00000417413 SIRT1Q96EB6 747 aa25.86■■□□□ 1.73
RAB3IP-205ENST00000417413 MED14O60244 1454 aa25.86■■□□□ 1.73
RAB3IP-205ENST00000417413 FAM135BQ49AJ0 1406 aa25.85■■□□□ 1.73
RAB3IP-205ENST00000417413 ANKLE2Q86XL3 938 aa25.85■■□□□ 1.73
RAB3IP-205ENST00000417413 CDK19Q9BWU1 502 aa25.84■■□□□ 1.73
RAB3IP-205ENST00000417413 BLMP54132 1417 aaPredicted RBP25.83■■□□□ 1.73
RAB3IP-205ENST00000417413 SUPT16HQ9Y5B9 1047 aaKnown RBP25.83■■□□□ 1.73
RAB3IP-205ENST00000417413 ZNF142P52746 1687 aaPredicted RBP25.82■■□□□ 1.72
RAB3IP-205ENST00000417413 KDM4FA0A1W2PPD8 638 aa25.81■■□□□ 1.72
RAB3IP-205ENST00000417413 CD163L1Q9NR16 1453 aa25.81■■□□□ 1.72
RAB3IP-205ENST00000417413 A0A1W2PP64 1363 aa25.79■■□□□ 1.72
RAB3IP-205ENST00000417413 CGNL1Q0VF96 1302 aa25.78■■□□□ 1.72
RAB3IP-205ENST00000417413 NSD2O96028 1365 aa25.77■■□□□ 1.72
RAB3IP-205ENST00000417413 SMG6Q86US8 1419 aaKnown RBP25.76■■□□□ 1.71
RAB3IP-205ENST00000417413 TBX22Q9Y458 520 aa25.76■■□□□ 1.71
RAB3IP-205ENST00000417413 MORC1Q86VD1 984 aa25.75■■□□□ 1.71
RAB3IP-205ENST00000417413 DIP2AQ14689 1571 aa25.74■■□□□ 1.71
RAB3IP-205ENST00000417413 ANKRD26Q9UPS8 1709 aa25.74■■□□□ 1.71
RAB3IP-205ENST00000417413 ROBO2Q9HCK4 1378 aa25.74■■□□□ 1.71
RAB3IP-205ENST00000417413 PTPRUQ92729 1446 aa25.74■■□□□ 1.71
RAB3IP-205ENST00000417413 TERF2IPQ9NYB0 399 aa25.74■■□□□ 1.71
RAB3IP-205ENST00000417413 ADAMTS8Q9UP79 889 aa25.74■■□□□ 1.71
RAB3IP-205ENST00000417413 SENP3-EIF4A1A0A087X0R7 540 aa25.73■■□□□ 1.71
RAB3IP-205ENST00000417413 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.72■■□□□ 1.71
RAB3IP-205ENST00000417413 WASLO00401 505 aaPredicted RBP25.72■■□□□ 1.71
RAB3IP-205ENST00000417413 FKBP8Q14318 412 aa25.72■■□□□ 1.71
RAB3IP-205ENST00000417413 POLR3AO14802 1390 aaPredicted RBP25.71■■□□□ 1.71
RAB3IP-205ENST00000417413 ADGRB2O60241 1585 aa25.71■■□□□ 1.71
RAB3IP-205ENST00000417413 ATP7BP35670 1465 aa25.7■■□□□ 1.71
RAB3IP-205ENST00000417413 SLC26A8Q96RN1 970 aa25.7■■□□□ 1.71
RAB3IP-205ENST00000417413 CABP1Q9NZU7 370 aa25.7■■□□□ 1.71
RAB3IP-205ENST00000417413 WDR43Q15061 677 aaKnown RBP eCLIP25.7■■□□□ 1.7
RAB3IP-205ENST00000417413 NEFLP07196 543 aa25.69■■□□□ 1.7
RAB3IP-205ENST00000417413 NUDCQ9Y266 331 aa25.69■■□□□ 1.7
RAB3IP-205ENST00000417413 KIF20BQ96Q89 1820 aa25.69■■□□□ 1.7
RAB3IP-205ENST00000417413 SHPRHQ149N8 1683 aa25.68■■□□□ 1.7
RAB3IP-205ENST00000417413 HDGFL2Q7Z4V5 671 aaPredicted RBP25.67■■□□□ 1.7
RAB3IP-205ENST00000417413 PIK3R4Q99570 1358 aa25.67■■□□□ 1.7
RAB3IP-205ENST00000417413 XRN1Q8IZH2 1706 aaKnown RBP25.64■■□□□ 1.7
RAB3IP-205ENST00000417413 CPSF1Q10570 1443 aaKnown RBP25.63■■□□□ 1.69
RAB3IP-205ENST00000417413 PPIP5K1Q6PFW1 1433 aa25.63■■□□□ 1.69
RAB3IP-205ENST00000417413 FYB1O15117 783 aa25.63■■□□□ 1.69
RAB3IP-205ENST00000417413 TNNT2P45379 298 aaPredicted RBP25.63■■□□□ 1.69
RAB3IP-205ENST00000417413 NPHP4O75161 1426 aaPredicted RBP25.62■■□□□ 1.69
RAB3IP-205ENST00000417413 AKAP12Q02952 1782 aa25.62■■□□□ 1.69
RAB3IP-205ENST00000417413 PDE3BQ13370 1112 aa25.62■■□□□ 1.69
RAB3IP-205ENST00000417413 NUDT16Q96DE0 195 aaKnown RBP25.62■■□□□ 1.69
RAB3IP-205ENST00000417413 AMOTL2Q9Y2J4 779 aa25.62■■□□□ 1.69
RAB3IP-205ENST00000417413 PTCH1Q13635 1447 aa25.62■■□□□ 1.69
RAB3IP-205ENST00000417413 CDC42BPGQ6DT37 1551 aa25.62■■□□□ 1.69
RAB3IP-205ENST00000417413 MON2Q7Z3U7 1717 aa25.61■■□□□ 1.69
RAB3IP-205ENST00000417413 TOPAZ1Q8N9V7 1692 aa25.6■■□□□ 1.69
RAB3IP-205ENST00000417413 SALL2Q9Y467 1007 aaPredicted RBP25.59■■□□□ 1.69
RAB3IP-205ENST00000417413 ITSN1Q15811 1721 aa25.59■■□□□ 1.69
RAB3IP-205ENST00000417413 MTHFSP49914 203 aa25.59■■□□□ 1.69
RAB3IP-205ENST00000417413 GGNBP2Q9H3C7 697 aa25.59■■□□□ 1.69
RAB3IP-205ENST00000417413 PRR36Q9H6K5 1346 aa25.58■■□□□ 1.69
RAB3IP-205ENST00000417413 CCDC61Q9Y6R9 512 aa25.58■■□□□ 1.69
RAB3IP-205ENST00000417413 NCKAP5LQ9HCH0 1330 aa25.56■■□□□ 1.68
RAB3IP-205ENST00000417413 EDC4Q6P2E9 1401 aaKnown RBP25.55■■□□□ 1.68
RAB3IP-205ENST00000417413 CHD2O14647 1828 aaKnown RBP25.54■■□□□ 1.68
RAB3IP-205ENST00000417413 RNF123Q5XPI4 1314 aa25.52■■□□□ 1.68
RAB3IP-205ENST00000417413 CFAP53Q96M91 514 aa25.52■■□□□ 1.68
RAB3IP-205ENST00000417413 LMTK3Q96Q04 1460 aa25.51■■□□□ 1.67
RAB3IP-205ENST00000417413 CCDC146Q8IYE0 955 aa25.51■■□□□ 1.67
RAB3IP-205ENST00000417413 ZNF521Q96K83 1311 aa25.5■■□□□ 1.67
RAB3IP-205ENST00000417413 CDCA7LQ96GN5 454 aa25.5■■□□□ 1.67
RAB3IP-205ENST00000417413 COL3A1P02461 1466 aaPredicted RBP25.49■■□□□ 1.67
RAB3IP-205ENST00000417413 HSPA2P54652 639 aa25.49■■□□□ 1.67
RAB3IP-205ENST00000417413 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.48■■□□□ 1.67
RAB3IP-205ENST00000417413 NRKQ7Z2Y5 1582 aa25.48■■□□□ 1.67
RAB3IP-205ENST00000417413 IRX6P78412 446 aaPredicted RBP25.48■■□□□ 1.67
RAB3IP-205ENST00000417413 ERICH6BQ5W0A0 696 aa25.47■■□□□ 1.67
RAB3IP-205ENST00000417413 ZNF692Q9BU19 519 aaPredicted RBP25.47■■□□□ 1.67
RAB3IP-205ENST00000417413 PLEKHG3A1L390 1219 aa25.46■■□□□ 1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms