RNA–Protein interactions for RNA: ENST00000416721.6

RBFOX2-208, Transcript of RNA binding fox-1 homolog 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RBFOX2, Length 1,254 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX2-208ENST00000416721 USP21Q9UK80 565 aa16.25■□□□□ 0.19
RBFOX2-208ENST00000416721 SHPRHQ149N8 1683 aa16.24■□□□□ 0.19
RBFOX2-208ENST00000416721 PTCH1Q13635 1447 aa16.24■□□□□ 0.19
RBFOX2-208ENST00000416721 SAFB2Q14151 953 aaKnown RBP eCLIP16.22■□□□□ 0.19
RBFOX2-208ENST00000416721 SOS2Q07890 1332 aaPredicted RBP16.21■□□□□ 0.19
RBFOX2-208ENST00000416721 NPHP3Q7Z494 1330 aa16.21■□□□□ 0.19
RBFOX2-208ENST00000416721 NALCNQ8IZF0 1738 aa16.21■□□□□ 0.19
RBFOX2-208ENST00000416721 HAP1P54257 671 aaPredicted RBP16.2■□□□□ 0.18
RBFOX2-208ENST00000416721 ANKRD30BQ9BXX2 1392 aa16.19■□□□□ 0.18
RBFOX2-208ENST00000416721 LMOD2Q6P5Q4 547 aa16.19■□□□□ 0.18
RBFOX2-208ENST00000416721 TRPC5Q9UL62 973 aaPredicted RBP16.18■□□□□ 0.18
RBFOX2-208ENST00000416721 PLEKHH1Q9ULM0 1364 aa16.17■□□□□ 0.18
RBFOX2-208ENST00000416721 NHSL1Q5SYE7 1610 aa16.17■□□□□ 0.18
RBFOX2-208ENST00000416721 LRPPRCP42704 1394 aaKnown RBP16.16■□□□□ 0.18
RBFOX2-208ENST00000416721 CFAP70Q5T0N1 1121 aa16.16■□□□□ 0.18
RBFOX2-208ENST00000416721 POGKQ9P215 609 aa16.16■□□□□ 0.18
RBFOX2-208ENST00000416721 KDM2AQ9Y2K7 1162 aa16.16■□□□□ 0.18
RBFOX2-208ENST00000416721 RGS12O14924 1447 aa16.14■□□□□ 0.17
RBFOX2-208ENST00000416721 KRT28Q7Z3Y7 464 aa16.14■□□□□ 0.17
RBFOX2-208ENST00000416721 SPATA31E1Q6ZUB1 1445 aa16.13■□□□□ 0.17
RBFOX2-208ENST00000416721 FNBP4Q8N3X1 1017 aaPredicted RBP16.13■□□□□ 0.17
RBFOX2-208ENST00000416721 PRAM1Q96QH2 718 aa16.13■□□□□ 0.17
RBFOX2-208ENST00000416721 DHX57Q6P158 1386 aaKnown RBP16.13■□□□□ 0.17
RBFOX2-208ENST00000416721 ABCC11Q96J66 1382 aa16.13■□□□□ 0.17
RBFOX2-208ENST00000416721 CDK12Q9NYV4 1490 aaPredicted RBP16.12■□□□□ 0.17
RBFOX2-208ENST00000416721 PSME1Q06323 249 aa16.12■□□□□ 0.17
RBFOX2-208ENST00000416721 C14orf93Q9H972 538 aaKnown RBP16.12■□□□□ 0.17
RBFOX2-208ENST00000416721 CCDC9Q9Y3X0 531 aaKnown RBP16.12■□□□□ 0.17
RBFOX2-208ENST00000416721 YTHDC2Q9H6S0 1430 aaKnown RBP16.11■□□□□ 0.17
RBFOX2-208ENST00000416721 PPLO60437 1756 aa16.11■□□□□ 0.17
RBFOX2-208ENST00000416721 PHF8Q9UPP1 1060 aa16.11■□□□□ 0.17
RBFOX2-208ENST00000416721 PMFBP1Q8TBY8 1022 aa16.1■□□□□ 0.17
RBFOX2-208ENST00000416721 CABLES1Q8TDN4 633 aa16.1■□□□□ 0.17
RBFOX2-208ENST00000416721 HIRIP3Q9BW71 556 aaPredicted RBP16.1■□□□□ 0.17
RBFOX2-208ENST00000416721 ACIN1Q9UKV3 1341 aaKnown RBP16.1■□□□□ 0.17
RBFOX2-208ENST00000416721 ATAD2Q6PL18 1390 aa16.1■□□□□ 0.17
RBFOX2-208ENST00000416721 TRAK1Q9UPV9 953 aa16.09■□□□□ 0.17
RBFOX2-208ENST00000416721 PIK3C2GO75747 1445 aa16.09■□□□□ 0.17
RBFOX2-208ENST00000416721 DCAF11Q8TEB1 546 aa16.08■□□□□ 0.16
RBFOX2-208ENST00000416721 GJD4Q96KN9 370 aaPredicted RBP16.08■□□□□ 0.16
RBFOX2-208ENST00000416721 RAB3GAP2Q9H2M9 1393 aa16.08■□□□□ 0.16
RBFOX2-208ENST00000416721 PRAG1Q86YV5 1406 aa16.08■□□□□ 0.16
RBFOX2-208ENST00000416721 A0A0G2JS52 829 aa16.07■□□□□ 0.16
RBFOX2-208ENST00000416721 MYT1Q01538 1121 aa16.07■□□□□ 0.16
RBFOX2-208ENST00000416721 SPATA31A3Q5VYP0 1347 aa16.07■□□□□ 0.16
RBFOX2-208ENST00000416721 CDC42BPGQ6DT37 1551 aa16.07■□□□□ 0.16
RBFOX2-208ENST00000416721 PXDNQ92626 1479 aa16.06■□□□□ 0.16
RBFOX2-208ENST00000416721 TECPR2O15040 1411 aa16.06■□□□□ 0.16
RBFOX2-208ENST00000416721 MINK1Q8N4C8 1332 aaPredicted RBP16.05■□□□□ 0.16
RBFOX2-208ENST00000416721 UNC5CLQ8IV45 518 aa16.05■□□□□ 0.16
RBFOX2-208ENST00000416721 SIRT1Q96EB6 747 aa16.05■□□□□ 0.16
RBFOX2-208ENST00000416721 MYOM2P54296 1465 aa16.03■□□□□ 0.16
RBFOX2-208ENST00000416721 ATRNO75882 1429 aa16.03■□□□□ 0.16
RBFOX2-208ENST00000416721 PAK3O75914 559 aaPredicted RBP16.03■□□□□ 0.16
RBFOX2-208ENST00000416721 ZRANB1Q9UGI0 708 aa16.02■□□□□ 0.16
RBFOX2-208ENST00000416721 BCL9LQ86UU0 1499 aa16.02■□□□□ 0.15
RBFOX2-208ENST00000416721 NGDNQ8NEJ9 315 aaKnown RBP16.01■□□□□ 0.15
RBFOX2-208ENST00000416721 LAMC1P11047 1609 aa16.01■□□□□ 0.15
RBFOX2-208ENST00000416721 SF3B2Q13435 895 aaKnown RBP15.99■□□□□ 0.15
RBFOX2-208ENST00000416721 GPRASP1Q5JY77 1395 aa15.99■□□□□ 0.15
RBFOX2-208ENST00000416721 TNS3Q68CZ2 1445 aa15.98■□□□□ 0.15
RBFOX2-208ENST00000416721 SEPT12Q8IYM1 358 aa15.98■□□□□ 0.15
RBFOX2-208ENST00000416721 CCDC125Q86Z20 511 aa15.97■□□□□ 0.15
RBFOX2-208ENST00000416721 COL22A1Q8NFW1 1626 aaPredicted RBP15.97■□□□□ 0.15
RBFOX2-208ENST00000416721 FAM83GA6ND36 823 aa15.96■□□□□ 0.15
RBFOX2-208ENST00000416721 WASLO00401 505 aaPredicted RBP15.96■□□□□ 0.15
RBFOX2-208ENST00000416721 ARHGEF10O15013 1369 aa15.96■□□□□ 0.15
RBFOX2-208ENST00000416721 IFT172Q9UG01 1749 aa15.95■□□□□ 0.14
RBFOX2-208ENST00000416721 VPS72Q15906 364 aa15.95■□□□□ 0.14
RBFOX2-208ENST00000416721 BTG4Q9NY30 223 aa15.95■□□□□ 0.14
RBFOX2-208ENST00000416721 RALGAPBQ86X10 1494 aa15.95■□□□□ 0.14
RBFOX2-208ENST00000416721 FMN2Q9NZ56 1722 aa15.94■□□□□ 0.14
RBFOX2-208ENST00000416721 SBNO1A3KN83 1393 aa15.94■□□□□ 0.14
RBFOX2-208ENST00000416721 NRXN1Q9ULB1 1477 aa15.94■□□□□ 0.14
RBFOX2-208ENST00000416721 FAM98CQ17RN3 349 aaKnown RBP15.93■□□□□ 0.14
RBFOX2-208ENST00000416721 NUTM2GQ5VZR2 741 aa15.93■□□□□ 0.14
RBFOX2-208ENST00000416721 KIF1AQ12756 1690 aa15.92■□□□□ 0.14
RBFOX2-208ENST00000416721 KNDC1Q76NI1 1749 aa15.92■□□□□ 0.14
RBFOX2-208ENST00000416721 KRT27Q7Z3Y8 459 aa15.92■□□□□ 0.14
RBFOX2-208ENST00000416721 DEFB132Q7Z7B7 95 aa15.92■□□□□ 0.14
RBFOX2-208ENST00000416721 SLIT2O94813 1529 aa15.92■□□□□ 0.14
RBFOX2-208ENST00000416721 PRR36Q9H6K5 1346 aa15.92■□□□□ 0.14
RBFOX2-208ENST00000416721 EIF3AQ14152 1382 aaKnown RBP15.91■□□□□ 0.14
RBFOX2-208ENST00000416721 NUDT16Q96DE0 195 aaKnown RBP15.91■□□□□ 0.14
RBFOX2-208ENST00000416721 PRDM11Q9NQV5 511 aa15.91■□□□□ 0.14
RBFOX2-208ENST00000416721 ANKARQ7Z5J8 1434 aa15.91■□□□□ 0.14
RBFOX2-208ENST00000416721 STAC3Q96MF2 364 aa15.9■□□□□ 0.14
RBFOX2-208ENST00000416721 CDK19Q9BWU1 502 aa15.9■□□□□ 0.14
RBFOX2-208ENST00000416721 STRN4Q9NRL3 753 aa15.89■□□□□ 0.13
RBFOX2-208ENST00000416721 USP32Q8NFA0 1604 aa15.88■□□□□ 0.13
RBFOX2-208ENST00000416721 FAM182BQ5T319 152 aa15.88■□□□□ 0.13
RBFOX2-208ENST00000416721 DLC1Q96QB1 1528 aa15.88■□□□□ 0.13
RBFOX2-208ENST00000416721 ZC3H6P61129 1189 aaKnown RBP15.87■□□□□ 0.13
RBFOX2-208ENST00000416721 CHRNA2Q15822 529 aa15.87■□□□□ 0.13
RBFOX2-208ENST00000416721 USP35Q9P2H5 1018 aa15.87■□□□□ 0.13
RBFOX2-208ENST00000416721 BLMP54132 1417 aaPredicted RBP15.86■□□□□ 0.13
RBFOX2-208ENST00000416721 SRCAPQ6ZRS2 3230 aa15.86■□□□□ 0.13
RBFOX2-208ENST00000416721 ZBTB7CA1YPR0 619 aa15.86■□□□□ 0.13
RBFOX2-208ENST00000416721 HRCP23327 699 aa15.86■□□□□ 0.13
RBFOX2-208ENST00000416721 EVA1CP58658 441 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms