RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 WAPLQ7Z5K2 1190 aa19.31■□□□□ 0.68
PHRF1-203ENST00000416188 TOM1O60784 492 aa19.3■□□□□ 0.68
PHRF1-203ENST00000416188 MTHFSP49914 203 aa19.3■□□□□ 0.68
PHRF1-203ENST00000416188 PCF11O94913 1555 aaKnown RBP19.3■□□□□ 0.68
PHRF1-203ENST00000416188 TOMM22Q9NS69 142 aa19.29■□□□□ 0.68
PHRF1-203ENST00000416188 WASHC2AQ641Q2 1341 aa19.29■□□□□ 0.68
PHRF1-203ENST00000416188 AIMP1Q12904 312 aaKnown RBP19.29■□□□□ 0.68
PHRF1-203ENST00000416188 NUDT16Q96DE0 195 aaKnown RBP19.29■□□□□ 0.68
PHRF1-203ENST00000416188 TNRQ92752 1358 aa19.29■□□□□ 0.68
PHRF1-203ENST00000416188 HTATSF1O43719 755 aaKnown RBP19.29■□□□□ 0.68
PHRF1-203ENST00000416188 FKBP5Q13451 457 aaPredicted RBP19.29■□□□□ 0.68
PHRF1-203ENST00000416188 VPS37DQ86XT2 251 aa19.29■□□□□ 0.68
PHRF1-203ENST00000416188 GAS2L2Q8NHY3 880 aa19.29■□□□□ 0.68
PHRF1-203ENST00000416188 CCDC61Q9Y6R9 512 aa19.28■□□□□ 0.68
PHRF1-203ENST00000416188 E9PSI1 815 aa19.28■□□□□ 0.68
PHRF1-203ENST00000416188 FOXO3O43524 673 aa19.28■□□□□ 0.68
PHRF1-203ENST00000416188 KIAA2012Q0VF49 1180 aa19.28■□□□□ 0.68
PHRF1-203ENST00000416188 HSP90B1P14625 803 aaKnown RBP19.28■□□□□ 0.68
PHRF1-203ENST00000416188 SYAP1Q96A49 352 aaPredicted RBP19.28■□□□□ 0.68
PHRF1-203ENST00000416188 RUNDC1Q96C34 613 aa19.28■□□□□ 0.68
PHRF1-203ENST00000416188 WDR7Q9Y4E6 1490 aa19.27■□□□□ 0.68
PHRF1-203ENST00000416188 HSPA2P54652 639 aa19.27■□□□□ 0.68
PHRF1-203ENST00000416188 DHX29Q7Z478 1369 aaKnown RBP19.27■□□□□ 0.67
PHRF1-203ENST00000416188 KIF7Q2M1P5 1343 aa19.27■□□□□ 0.67
PHRF1-203ENST00000416188 RIC3Q7Z5B4 369 aa19.27■□□□□ 0.67
PHRF1-203ENST00000416188 EXOC6Q8TAG9 804 aa19.26■□□□□ 0.67
PHRF1-203ENST00000416188 NOL10Q9BSC4 688 aaKnown RBP19.26■□□□□ 0.67
PHRF1-203ENST00000416188 GNAI1P63096 354 aa19.26■□□□□ 0.67
PHRF1-203ENST00000416188 SPG7Q9UQ90 795 aa19.26■□□□□ 0.67
PHRF1-203ENST00000416188 FAM177BA6PVY3 158 aa19.25■□□□□ 0.67
PHRF1-203ENST00000416188 ROCK1Q13464 1354 aa19.25■□□□□ 0.67
PHRF1-203ENST00000416188 CABP4P57796 275 aa19.25■□□□□ 0.67
PHRF1-203ENST00000416188 GOLGA6L3A6NEY3 463 aa19.24■□□□□ 0.67
PHRF1-203ENST00000416188 PHF8Q9UPP1 1060 aa19.24■□□□□ 0.67
PHRF1-203ENST00000416188 CADPS2Q86UW7 1296 aa19.24■□□□□ 0.67
PHRF1-203ENST00000416188 BIVM-ERCC5R4GMW8 1640 aa19.24■□□□□ 0.67
PHRF1-203ENST00000416188 COG6Q9Y2V7 657 aa19.24■□□□□ 0.67
PHRF1-203ENST00000416188 ATAD2Q6PL18 1390 aa19.24■□□□□ 0.67
PHRF1-203ENST00000416188 ATP10BO94823 1461 aa19.23■□□□□ 0.67
PHRF1-203ENST00000416188 ZNF530Q6P9A1 599 aaPredicted RBP19.23■□□□□ 0.67
PHRF1-203ENST00000416188 ANKRD45Q5TZF3 282 aa19.23■□□□□ 0.67
PHRF1-203ENST00000416188 KCNH5Q8NCM2 988 aa19.23■□□□□ 0.67
PHRF1-203ENST00000416188 ZKSCAN2Q63HK3 967 aa19.22■□□□□ 0.67
PHRF1-203ENST00000416188 TRIM34Q9BYJ4 488 aa19.22■□□□□ 0.67
PHRF1-203ENST00000416188 CENPQQ7L2Z9 268 aaPredicted RBP19.22■□□□□ 0.67
PHRF1-203ENST00000416188 ABCC5O15440 1437 aa19.22■□□□□ 0.67
PHRF1-203ENST00000416188 PLCH2O75038 1416 aa19.22■□□□□ 0.67
PHRF1-203ENST00000416188 RRP1P56182 461 aaKnown RBP19.22■□□□□ 0.67
PHRF1-203ENST00000416188 FOXD4L5Q5VV16 416 aaPredicted RBP19.22■□□□□ 0.67
PHRF1-203ENST00000416188 FOXD4L4Q8WXT5 416 aaPredicted RBP19.22■□□□□ 0.67
PHRF1-203ENST00000416188 KIF21AQ7Z4S6 1674 aa19.22■□□□□ 0.67
PHRF1-203ENST00000416188 CRBNQ96SW2 442 aa19.22■□□□□ 0.67
PHRF1-203ENST00000416188 ST18O60284 1047 aa19.21■□□□□ 0.67
PHRF1-203ENST00000416188 ZBED9Q6R2W3 1325 aa19.21■□□□□ 0.67
PHRF1-203ENST00000416188 PDE4AP27815 886 aa19.21■□□□□ 0.67
PHRF1-203ENST00000416188 CCDC7Q96M83 1385 aa19.21■□□□□ 0.67
PHRF1-203ENST00000416188 SULT6B1Q6IMI4 303 aa19.2■□□□□ 0.66
PHRF1-203ENST00000416188 PRKAR2BP31323 418 aa19.2■□□□□ 0.66
PHRF1-203ENST00000416188 SLC4A3P48751 1232 aa19.2■□□□□ 0.66
PHRF1-203ENST00000416188 RILPL2Q969X0 211 aa19.19■□□□□ 0.66
PHRF1-203ENST00000416188 WDR62O43379 1518 aa19.19■□□□□ 0.66
PHRF1-203ENST00000416188 KIF6Q6ZMV9 814 aa19.19■□□□□ 0.66
PHRF1-203ENST00000416188 MSH6P52701 1360 aa19.19■□□□□ 0.66
PHRF1-203ENST00000416188 API5Q9BZZ5 524 aaKnown RBP19.18■□□□□ 0.66
PHRF1-203ENST00000416188 EIF4G3O43432 1585 aaKnown RBP19.18■□□□□ 0.66
PHRF1-203ENST00000416188 NCBP3Q53F19 620 aaKnown RBP19.18■□□□□ 0.66
PHRF1-203ENST00000416188 FAM161AQ3B820 660 aa19.18■□□□□ 0.66
PHRF1-203ENST00000416188 FAM135AQ9P2D6 1515 aa19.18■□□□□ 0.66
PHRF1-203ENST00000416188 ARID3AQ99856 593 aa19.17■□□□□ 0.66
PHRF1-203ENST00000416188 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
PHRF1-203ENST00000416188 RRS1Q15050 365 aaKnown RBP19.17■□□□□ 0.66
PHRF1-203ENST00000416188 KIF16BQ96L93 1317 aa19.16■□□□□ 0.66
PHRF1-203ENST00000416188 AMOTL1Q8IY63 956 aa19.16■□□□□ 0.66
PHRF1-203ENST00000416188 AMER1Q5JTC6 1135 aaPredicted RBP19.15■□□□□ 0.66
PHRF1-203ENST00000416188 NBPF8Q3BBV2 869 aa19.15■□□□□ 0.66
PHRF1-203ENST00000416188 KRT28Q7Z3Y7 464 aa19.15■□□□□ 0.66
PHRF1-203ENST00000416188 ZNF518AQ6AHZ1 1483 aa19.15■□□□□ 0.66
PHRF1-203ENST00000416188 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP19.14■□□□□ 0.662e-6■■■□□ 15.2
PHRF1-203ENST00000416188 CCDC34Q96HJ3 373 aa19.14■□□□□ 0.66
PHRF1-203ENST00000416188 HMGB2P26583 209 aaKnown RBP19.14■□□□□ 0.65
PHRF1-203ENST00000416188 G3BP1Q13283 466 aaKnown RBP eCLIP19.14■□□□□ 0.657e-7■■■■□ 25.3
PHRF1-203ENST00000416188 TPM4P67936 248 aa19.14■□□□□ 0.65
PHRF1-203ENST00000416188 CSPP1Q1MSJ5 1256 aa19.14■□□□□ 0.65
PHRF1-203ENST00000416188 RASSF8Q8NHQ8 419 aa19.14■□□□□ 0.65
PHRF1-203ENST00000416188 RAD21O60216 631 aa19.13■□□□□ 0.65
PHRF1-203ENST00000416188 ADAMTS12P58397 1594 aa19.13■□□□□ 0.65
PHRF1-203ENST00000416188 RAPGEF6Q8TEU7 1601 aa19.13■□□□□ 0.65
PHRF1-203ENST00000416188 LRRFIP1Q32MZ4 808 aaKnown RBP19.13■□□□□ 0.65
PHRF1-203ENST00000416188 NAIPQ13075 1403 aa19.12■□□□□ 0.65
PHRF1-203ENST00000416188 ADGRF5Q8IZF2 1346 aa19.12■□□□□ 0.65
PHRF1-203ENST00000416188 A2MP01023 1474 aa19.11■□□□□ 0.65
PHRF1-203ENST00000416188 THOC2Q8NI27 1593 aaKnown RBP19.11■□□□□ 0.65
PHRF1-203ENST00000416188 KDM5BQ9UGL1 1544 aa19.11■□□□□ 0.65
PHRF1-203ENST00000416188 PTPN23Q9H3S7 1636 aa19.11■□□□□ 0.65
PHRF1-203ENST00000416188 CTDP1Q9Y5B0 961 aaPredicted RBP19.11■□□□□ 0.65
PHRF1-203ENST00000416188 NCOA1Q15788 1441 aa19.11■□□□□ 0.65
PHRF1-203ENST00000416188 UHRF1BP1LA0JNW5 1464 aa19.11■□□□□ 0.65
PHRF1-203ENST00000416188 WASLO00401 505 aaPredicted RBP19.11■□□□□ 0.65
PHRF1-203ENST00000416188 FOXD4L6Q3SYB3 417 aaPredicted RBP19.11■□□□□ 0.65
PHRF1-203ENST00000416188 FOXD4L3Q6VB84 417 aaPredicted RBP19.11■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms