RNA–Protein interactions for RNA: ENST00000415950.4

SCN1B-202, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SCN1B, Length 4,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-202ENST00000415950 IFFO2Q5TF58 517 aa15.75■□□□□ 0.11
SCN1B-202ENST00000415950 ZNF771Q7L3S4 317 aaPredicted RBP15.75■□□□□ 0.11
SCN1B-202ENST00000415950 AMPHP49418 695 aa15.74■□□□□ 0.11
SCN1B-202ENST00000415950 FBXW7Q969H0 707 aa15.74■□□□□ 0.11
SCN1B-202ENST00000415950 NEK4P51957 841 aa15.74■□□□□ 0.11
SCN1B-202ENST00000415950 EVC2Q86UK5 1308 aa15.73■□□□□ 0.11
SCN1B-202ENST00000415950 A0A0U1RQG5 324 aaPredicted RBP15.73■□□□□ 0.11
SCN1B-202ENST00000415950 SEC24BO95487 1268 aa15.73■□□□□ 0.11
SCN1B-202ENST00000415950 FAM184AQ8NB25 1140 aa15.73■□□□□ 0.11
SCN1B-202ENST00000415950 NGDNQ8NEJ9 315 aaKnown RBP15.73■□□□□ 0.11
SCN1B-202ENST00000415950 THUMPD2Q9BTF0 503 aaKnown RBP15.73■□□□□ 0.11
SCN1B-202ENST00000415950 TOP2BQ02880 1626 aa15.73■□□□□ 0.11
SCN1B-202ENST00000415950 EIF2S2P20042 333 aaKnown RBP15.73■□□□□ 0.11
SCN1B-202ENST00000415950 TPM3P06753 285 aa15.72■□□□□ 0.11
SCN1B-202ENST00000415950 VPS37CA5D8V6 355 aaPredicted RBP15.72■□□□□ 0.11
SCN1B-202ENST00000415950 REC8O95072 547 aa15.72■□□□□ 0.11
SCN1B-202ENST00000415950 CCDC27Q2M243 656 aa15.72■□□□□ 0.11
SCN1B-202ENST00000415950 CCDC34Q96HJ3 373 aa15.72■□□□□ 0.11
SCN1B-202ENST00000415950 TNNQ9UQP3 1299 aa15.71■□□□□ 0.11
SCN1B-202ENST00000415950 PTPRGP23470 1445 aa15.71■□□□□ 0.11
SCN1B-202ENST00000415950 PRKAR2BP31323 418 aa15.71■□□□□ 0.1
SCN1B-202ENST00000415950 NUCB2P80303 420 aa15.71■□□□□ 0.1
SCN1B-202ENST00000415950 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.71■□□□□ 0.1
SCN1B-202ENST00000415950 MVPQ14764 893 aaKnown RBP15.7■□□□□ 0.1
SCN1B-202ENST00000415950 LMOD3Q0VAK6 560 aa15.7■□□□□ 0.1
SCN1B-202ENST00000415950 FOSBP53539 338 aa15.69■□□□□ 0.1
SCN1B-202ENST00000415950 URB2Q14146 1524 aaKnown RBP15.69■□□□□ 0.1
SCN1B-202ENST00000415950 NGEFQ8N5V2 710 aa15.69■□□□□ 0.1
SCN1B-202ENST00000415950 TMEM57Q8N5G2 664 aa15.69■□□□□ 0.1
SCN1B-202ENST00000415950 ABCF1Q8NE71 845 aaKnown RBP eCLIP15.69■□□□□ 0.1
SCN1B-202ENST00000415950 ATP6V1DQ9Y5K8 247 aa15.69■□□□□ 0.1
SCN1B-202ENST00000415950 CDK13Q14004 1512 aaKnown RBP15.69■□□□□ 0.1
SCN1B-202ENST00000415950 FKBP5Q13451 457 aaPredicted RBP15.69■□□□□ 0.1
SCN1B-202ENST00000415950 ATF7IPQ6VMQ6 1270 aa15.69■□□□□ 0.1
SCN1B-202ENST00000415950 CDC45O75419 566 aa15.68■□□□□ 0.1
SCN1B-202ENST00000415950 DIAPH3Q9NSV4 1193 aa15.68■□□□□ 0.1
SCN1B-202ENST00000415950 RARSP54136 660 aaKnown RBP15.68■□□□□ 0.1
SCN1B-202ENST00000415950 INTS3Q68E01 1043 aaKnown RBP15.68■□□□□ 0.1
SCN1B-202ENST00000415950 C8orf34Q49A92 452 aa15.67■□□□□ 0.1
SCN1B-202ENST00000415950 KIF3AQ9Y496 699 aa15.67■□□□□ 0.1
SCN1B-202ENST00000415950 DAPK1P53355 1430 aa15.67■□□□□ 0.1
SCN1B-202ENST00000415950 BICD2Q8TD16 824 aa15.67■□□□□ 0.1
SCN1B-202ENST00000415950 API5Q9BZZ5 524 aaKnown RBP15.66■□□□□ 0.1
SCN1B-202ENST00000415950 PCDHB15Q9Y5E8 787 aa15.66■□□□□ 0.1
SCN1B-202ENST00000415950 HDAC5Q9UQL6 1122 aa15.66■□□□□ 0.1
SCN1B-202ENST00000415950 PCF11O94913 1555 aaKnown RBP15.66■□□□□ 0.1
SCN1B-202ENST00000415950 VGFO15240 615 aaPredicted RBP15.66■□□□□ 0.1
SCN1B-202ENST00000415950 XRCC6P12956 609 aaKnown RBP eCLIP15.66■□□□□ 0.1
SCN1B-202ENST00000415950 HOMER1Q86YM7 354 aa15.66■□□□□ 0.1
SCN1B-202ENST00000415950 SSH1Q8WYL5 1049 aa15.66■□□□□ 0.1
SCN1B-202ENST00000415950 COG3Q96JB2 828 aa15.65■□□□□ 0.1
SCN1B-202ENST00000415950 TPD52L1Q16890 204 aaPredicted RBP15.65■□□□□ 0.1
SCN1B-202ENST00000415950 FIBPO43427 364 aa15.65■□□□□ 0.1
SCN1B-202ENST00000415950 ERBINQ96RT1 1412 aa15.65■□□□□ 0.1
SCN1B-202ENST00000415950 PRDM2Q13029 1718 aa15.64■□□□□ 0.1
SCN1B-202ENST00000415950 CHD1LQ86WJ1 897 aa15.64■□□□□ 0.09
SCN1B-202ENST00000415950 SPC24Q8NBT2 197 aa15.64■□□□□ 0.09
SCN1B-202ENST00000415950 K7ELQ4 463 aaPredicted RBP15.64■□□□□ 0.09
SCN1B-202ENST00000415950 SSFA2P28290 1259 aa15.64■□□□□ 0.09
SCN1B-202ENST00000415950 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP15.64■□□□□ 0.09
SCN1B-202ENST00000415950 CHMP4AQ9BY43 222 aa15.64■□□□□ 0.09
SCN1B-202ENST00000415950 XPCQ01831 940 aaPredicted RBP15.63■□□□□ 0.09
SCN1B-202ENST00000415950 SPINK5Q9NQ38 1064 aaPredicted RBP15.63■□□□□ 0.09
SCN1B-202ENST00000415950 PRDM10Q9NQV6 1147 aa15.63■□□□□ 0.09
SCN1B-202ENST00000415950 IFT57Q9NWB7 429 aa15.63■□□□□ 0.09
SCN1B-202ENST00000415950 TNPO1Q92973 898 aaKnown RBP15.62■□□□□ 0.09
SCN1B-202ENST00000415950 ZKSCAN1P17029 563 aaPredicted RBP15.62■□□□□ 0.09
SCN1B-202ENST00000415950 TWISTNBQ3B726 338 aaPredicted RBP15.62■□□□□ 0.09
SCN1B-202ENST00000415950 TRHP20396 242 aaPredicted RBP15.62■□□□□ 0.09
SCN1B-202ENST00000415950 PATL2C9JE40 543 aaKnown RBP15.62■□□□□ 0.09
SCN1B-202ENST00000415950 GNAI1P63096 354 aa15.61■□□□□ 0.09
SCN1B-202ENST00000415950 MAP3K1Q13233 1512 aa15.61■□□□□ 0.09
SCN1B-202ENST00000415950 ABCA10Q8WWZ4 1543 aa15.61■□□□□ 0.09
SCN1B-202ENST00000415950 C9orf84Q5VXU9 1444 aa15.61■□□□□ 0.09
SCN1B-202ENST00000415950 MAP4K4O95819 1239 aaPredicted RBP15.61■□□□□ 0.09
SCN1B-202ENST00000415950 SMC3Q9UQE7 1217 aa15.61■□□□□ 0.09
SCN1B-202ENST00000415950 SYCE3A1L190 88 aa15.61■□□□□ 0.09
SCN1B-202ENST00000415950 NUTM2GQ5VZR2 741 aa15.6■□□□□ 0.09
SCN1B-202ENST00000415950 FBLN1P23142 703 aa15.6■□□□□ 0.09
SCN1B-202ENST00000415950 CCDC173Q0VFZ6 552 aa15.6■□□□□ 0.09
SCN1B-202ENST00000415950 C9orf78Q9NZ63 289 aaPredicted RBP15.6■□□□□ 0.09
SCN1B-202ENST00000415950 MARCH6O60337 910 aa15.6■□□□□ 0.09
SCN1B-202ENST00000415950 CYB5RLQ6IPT4 315 aa15.6■□□□□ 0.09
SCN1B-202ENST00000415950 UPF3BQ9BZI7 483 aaKnown RBP15.6■□□□□ 0.09
SCN1B-202ENST00000415950 DCTN1Q14203 1278 aa15.6■□□□□ 0.09
SCN1B-202ENST00000415950 RBM42Q9BTD8 480 aaKnown RBP15.6■□□□□ 0.09
SCN1B-202ENST00000415950 ABCC5O15440 1437 aa15.6■□□□□ 0.09
SCN1B-202ENST00000415950 SMARCA5O60264 1052 aaPredicted RBP15.59■□□□□ 0.09
SCN1B-202ENST00000415950 DISP3Q9P2K9 1392 aa15.59■□□□□ 0.09
SCN1B-202ENST00000415950 UQCRHLA0A096LP55 91 aa15.59■□□□□ 0.09
SCN1B-202ENST00000415950 UQCRHP07919 91 aa15.59■□□□□ 0.09
SCN1B-202ENST00000415950 TSR1Q2NL82 804 aaKnown RBP15.59■□□□□ 0.09
SCN1B-202ENST00000415950 TSPYL4Q9UJ04 414 aa15.59■□□□□ 0.09
SCN1B-202ENST00000415950 TEFQ10587 303 aa15.58■□□□□ 0.08
SCN1B-202ENST00000415950 ZMYND15Q9H091 742 aa15.58■□□□□ 0.08
SCN1B-202ENST00000415950 GDPD2Q9HCC8 539 aa15.58■□□□□ 0.08
SCN1B-202ENST00000415950 RPRD2Q5VT52 1461 aaKnown RBP15.58■□□□□ 0.08
SCN1B-202ENST00000415950 RLBP1P12271 317 aa15.58■□□□□ 0.08
SCN1B-202ENST00000415950 VPS53Q5VIR6 699 aa15.58■□□□□ 0.08
SCN1B-202ENST00000415950 LARP6Q9BRS8 491 aaKnown RBP15.58■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms