RNA–Protein interactions for RNA: ENST00000415560.1

HMGA1P1-201, Transcript of high mobility group AT-hook 1 pseudogene 1, humanhuman

BASIC

Gene HMGA1P1, Length 1,062 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1P1-201ENST00000415560 CDK19Q9BWU1 502 aa19.52■□□□□ 0.72
HMGA1P1-201ENST00000415560 PTPRUQ92729 1446 aa19.51■□□□□ 0.71
HMGA1P1-201ENST00000415560 CHD2O14647 1828 aaKnown RBP19.51■□□□□ 0.71
HMGA1P1-201ENST00000415560 TMC1Q8TDI8 760 aa19.51■□□□□ 0.71
HMGA1P1-201ENST00000415560 ATAD2Q6PL18 1390 aa19.51■□□□□ 0.71
HMGA1P1-201ENST00000415560 PLEKHH1Q9ULM0 1364 aa19.5■□□□□ 0.71
HMGA1P1-201ENST00000415560 CCER2I3L3R5 266 aa19.5■□□□□ 0.71
HMGA1P1-201ENST00000415560 CABP2Q9NPB3 220 aa19.5■□□□□ 0.71
HMGA1P1-201ENST00000415560 KNSTRNQ9Y448 316 aa19.5■□□□□ 0.71
HMGA1P1-201ENST00000415560 TULP4Q9NRJ4 1543 aa19.5■□□□□ 0.71
HMGA1P1-201ENST00000415560 PTCH1Q13635 1447 aa19.5■□□□□ 0.71
HMGA1P1-201ENST00000415560 ROBO2Q9HCK4 1378 aa19.49■□□□□ 0.71
HMGA1P1-201ENST00000415560 NINLQ9Y2I6 1382 aa19.49■□□□□ 0.71
HMGA1P1-201ENST00000415560 KTN1Q86UP2 1357 aaKnown RBP19.48■□□□□ 0.71
HMGA1P1-201ENST00000415560 WASLO00401 505 aaPredicted RBP19.48■□□□□ 0.71
HMGA1P1-201ENST00000415560 PRKRIP1Q9H875 184 aaPredicted RBP19.48■□□□□ 0.71
HMGA1P1-201ENST00000415560 MYOM1P52179 1685 aa19.47■□□□□ 0.71
HMGA1P1-201ENST00000415560 PER1O15534 1290 aaPredicted RBP19.47■□□□□ 0.71
HMGA1P1-201ENST00000415560 KCNA6P17658 529 aa19.47■□□□□ 0.71
HMGA1P1-201ENST00000415560 XRN1Q8IZH2 1706 aaKnown RBP19.47■□□□□ 0.71
HMGA1P1-201ENST00000415560 HSPA2P54652 639 aa19.46■□□□□ 0.71
HMGA1P1-201ENST00000415560 RALBP1Q15311 655 aa19.45■□□□□ 0.7
HMGA1P1-201ENST00000415560 LMTK3Q96Q04 1460 aa19.45■□□□□ 0.7
HMGA1P1-201ENST00000415560 SLC12A5Q9H2X9 1139 aa19.44■□□□□ 0.7
HMGA1P1-201ENST00000415560 TERF2IPQ9NYB0 399 aa19.44■□□□□ 0.7
HMGA1P1-201ENST00000415560 HDGFL2Q7Z4V5 671 aaPredicted RBP19.42■□□□□ 0.7
HMGA1P1-201ENST00000415560 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.42■□□□□ 0.7
HMGA1P1-201ENST00000415560 ADGRB2O60241 1585 aa19.41■□□□□ 0.7
HMGA1P1-201ENST00000415560 CNGB1Q14028 1251 aaPredicted RBP19.39■□□□□ 0.69
HMGA1P1-201ENST00000415560 NUDT16Q96DE0 195 aaKnown RBP19.39■□□□□ 0.69
HMGA1P1-201ENST00000415560 DMRT2Q9Y5R5 561 aa19.39■□□□□ 0.69
HMGA1P1-201ENST00000415560 CCDC61Q9Y6R9 512 aa19.39■□□□□ 0.69
HMGA1P1-201ENST00000415560 ANKRD36BQ8N2N9 1353 aa19.39■□□□□ 0.69
HMGA1P1-201ENST00000415560 AEBP2Q6ZN18 517 aaPredicted RBP19.38■□□□□ 0.69
HMGA1P1-201ENST00000415560 CABP1Q9NZU7 370 aa19.38■□□□□ 0.69
HMGA1P1-201ENST00000415560 NPC1L1Q9UHC9 1359 aa19.38■□□□□ 0.69
HMGA1P1-201ENST00000415560 PROSER2Q86WR7 435 aaPredicted RBP19.37■□□□□ 0.69
HMGA1P1-201ENST00000415560 NWD1Q149M9 1564 aa19.36■□□□□ 0.69
HMGA1P1-201ENST00000415560 CC2D1BQ5T0F9 858 aaKnown RBP19.36■□□□□ 0.69
HMGA1P1-201ENST00000415560 STRCQ7RTU9 1775 aa19.35■□□□□ 0.69
HMGA1P1-201ENST00000415560 C14orf37Q86TY3 774 aa19.35■□□□□ 0.69
HMGA1P1-201ENST00000415560 ZNF692Q9BU19 519 aaPredicted RBP19.35■□□□□ 0.69
HMGA1P1-201ENST00000415560 CARD14Q9BXL6 1004 aa19.35■□□□□ 0.69
HMGA1P1-201ENST00000415560 MYBBP1AQ9BQG0 1328 aaKnown RBP19.34■□□□□ 0.69
HMGA1P1-201ENST00000415560 AMER1Q5JTC6 1135 aaPredicted RBP19.34■□□□□ 0.69
HMGA1P1-201ENST00000415560 NKTRP30414 1462 aaKnown RBP19.34■□□□□ 0.69
HMGA1P1-201ENST00000415560 PPIP5K1Q6PFW1 1433 aa19.34■□□□□ 0.69
HMGA1P1-201ENST00000415560 CGNL1Q0VF96 1302 aa19.33■□□□□ 0.69
HMGA1P1-201ENST00000415560 ATP7BP35670 1465 aa19.33■□□□□ 0.68
HMGA1P1-201ENST00000415560 NSD3Q9BZ95 1437 aa19.33■□□□□ 0.68
HMGA1P1-201ENST00000415560 PARD3Q8TEW0 1356 aa19.32■□□□□ 0.68
HMGA1P1-201ENST00000415560 ITSN1Q15811 1721 aa19.31■□□□□ 0.68
HMGA1P1-201ENST00000415560 PLEKHG3A1L390 1219 aa19.3■□□□□ 0.68
HMGA1P1-201ENST00000415560 MRS2Q9HD23 443 aa19.3■□□□□ 0.68
HMGA1P1-201ENST00000415560 NCOA3Q9Y6Q9 1424 aa19.3■□□□□ 0.68
HMGA1P1-201ENST00000415560 A0A1W2PP64 1363 aa19.3■□□□□ 0.68
HMGA1P1-201ENST00000415560 NSD2O96028 1365 aa19.3■□□□□ 0.68
HMGA1P1-201ENST00000415560 USP32Q8NFA0 1604 aa19.29■□□□□ 0.68
HMGA1P1-201ENST00000415560 ANKARQ7Z5J8 1434 aa19.29■□□□□ 0.68
HMGA1P1-201ENST00000415560 ADGRL3Q9HAR2 1447 aa19.29■□□□□ 0.68
HMGA1P1-201ENST00000415560 NLRP13Q86W25 1043 aa19.28■□□□□ 0.68
HMGA1P1-201ENST00000415560 CDC42BPGQ6DT37 1551 aa19.27■□□□□ 0.68
HMGA1P1-201ENST00000415560 PRR36Q9H6K5 1346 aa19.27■□□□□ 0.68
HMGA1P1-201ENST00000415560 NUTM2FA1L443 756 aa19.27■□□□□ 0.68
HMGA1P1-201ENST00000415560 MORC1Q86VD1 984 aa19.27■□□□□ 0.68
HMGA1P1-201ENST00000415560 C19orf44Q9H6X5 657 aa19.27■□□□□ 0.68
HMGA1P1-201ENST00000415560 NALCNQ8IZF0 1738 aa19.27■□□□□ 0.68
HMGA1P1-201ENST00000415560 FMN2Q9NZ56 1722 aa19.27■□□□□ 0.68
HMGA1P1-201ENST00000415560 BRD4O60885 1362 aaPredicted RBP19.27■□□□□ 0.68
HMGA1P1-201ENST00000415560 CD163L1Q9NR16 1453 aa19.26■□□□□ 0.67
HMGA1P1-201ENST00000415560 CPSF1Q10570 1443 aaKnown RBP19.25■□□□□ 0.67
HMGA1P1-201ENST00000415560 TOPAZ1Q8N9V7 1692 aa19.25■□□□□ 0.67
HMGA1P1-201ENST00000415560 AKAP12Q02952 1782 aa19.24■□□□□ 0.67
HMGA1P1-201ENST00000415560 RBM33Q96EV2 1170 aaKnown RBP19.24■□□□□ 0.67
HMGA1P1-201ENST00000415560 NGDNQ8NEJ9 315 aaKnown RBP19.23■□□□□ 0.67
HMGA1P1-201ENST00000415560 YTHDC1Q96MU7 727 aaKnown RBP19.23■□□□□ 0.67
HMGA1P1-201ENST00000415560 RGPD8O14715 1765 aaPredicted RBP19.23■□□□□ 0.67
HMGA1P1-201ENST00000415560 EDC4Q6P2E9 1401 aaKnown RBP19.23■□□□□ 0.67
HMGA1P1-201ENST00000415560 ACEP12821 1306 aa19.23■□□□□ 0.67
HMGA1P1-201ENST00000415560 STRCP1A6NGW2 1772 aa19.22■□□□□ 0.67
HMGA1P1-201ENST00000415560 ATF3P18847 181 aa19.22■□□□□ 0.67
HMGA1P1-201ENST00000415560 PPP2R1AP30153 589 aa19.22■□□□□ 0.67
HMGA1P1-201ENST00000415560 TMEM94Q12767 1356 aa19.2■□□□□ 0.66
HMGA1P1-201ENST00000415560 MON2Q7Z3U7 1717 aa19.2■□□□□ 0.66
HMGA1P1-201ENST00000415560 FYB1O15117 783 aa19.2■□□□□ 0.66
HMGA1P1-201ENST00000415560 SUGP2Q8IX01 1082 aaKnown RBP eCLIP19.2■□□□□ 0.66
HMGA1P1-201ENST00000415560 PMFBP1Q8TBY8 1022 aa19.2■□□□□ 0.66
HMGA1P1-201ENST00000415560 KIF20BQ96Q89 1820 aa19.2■□□□□ 0.66
HMGA1P1-201ENST00000415560 CCDC184Q52MB2 194 aa19.19■□□□□ 0.66
HMGA1P1-201ENST00000415560 PHF8Q9UPP1 1060 aa19.19■□□□□ 0.66
HMGA1P1-201ENST00000415560 ANKRD26Q9UPS8 1709 aa19.19■□□□□ 0.66
HMGA1P1-201ENST00000415560 CADPS2Q86UW7 1296 aa19.18■□□□□ 0.66
HMGA1P1-201ENST00000415560 FAM9BQ8IZU0 186 aa19.18■□□□□ 0.66
HMGA1P1-201ENST00000415560 GGNBP2Q9H3C7 697 aa19.18■□□□□ 0.66
HMGA1P1-201ENST00000415560 POLR3AO14802 1390 aaPredicted RBP19.18■□□□□ 0.66
HMGA1P1-201ENST00000415560 MSH6P52701 1360 aa19.18■□□□□ 0.66
HMGA1P1-201ENST00000415560 DCCP43146 1447 aa19.17■□□□□ 0.66
HMGA1P1-201ENST00000415560 CENPBP07199 599 aaPredicted RBP19.17■□□□□ 0.66
HMGA1P1-201ENST00000415560 ESCO1Q5FWF5 840 aa19.17■□□□□ 0.66
HMGA1P1-201ENST00000415560 TTC21AQ8NDW8 1320 aa19.16■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms