RNA–Protein interactions for RNA: ENST00000415541.5

SIK3-203, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 3,816 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-203ENST00000415541 PTMSP20962 102 aa9.82□□□□□ -0.84
SIK3-203ENST00000415541 U2AF1Q01081 240 aaKnown RBP eCLIP9.82□□□□□ -0.84
SIK3-203ENST00000415541 DUOX2Q9NRD8 1548 aa9.82□□□□□ -0.84
SIK3-203ENST00000415541 SHANK2Q9UPX8 1470 aa9.82□□□□□ -0.84
SIK3-203ENST00000415541 CCDC173Q0VFZ6 552 aa9.82□□□□□ -0.84
SIK3-203ENST00000415541 GTPBP4Q9BZE4 634 aaKnown RBP9.82□□□□□ -0.84
SIK3-203ENST00000415541 TTC37Q6PGP7 1564 aa9.81□□□□□ -0.84
SIK3-203ENST00000415541 A2MP01023 1474 aa9.81□□□□□ -0.84
SIK3-203ENST00000415541 TERF2IPQ9NYB0 399 aa9.81□□□□□ -0.84
SIK3-203ENST00000415541 DYNC1I1O14576 645 aa9.81□□□□□ -0.84
SIK3-203ENST00000415541 CSPP1Q1MSJ5 1256 aa9.81□□□□□ -0.84
SIK3-203ENST00000415541 PRAM1Q96QH2 718 aa9.81□□□□□ -0.84
SIK3-203ENST00000415541 ZNF518AQ6AHZ1 1483 aa9.81□□□□□ -0.84
SIK3-203ENST00000415541 LETM1O95202 739 aaPredicted RBP9.8□□□□□ -0.84
SIK3-203ENST00000415541 PPP4R3BQ5MIZ7 849 aa9.8□□□□□ -0.84
SIK3-203ENST00000415541 SLC26A8Q96RN1 970 aa9.8□□□□□ -0.84
SIK3-203ENST00000415541 R3HCC1Q9Y3T6 440 aaKnown RBP9.8□□□□□ -0.84
SIK3-203ENST00000415541 TXNDC2Q86VQ3 553 aa9.8□□□□□ -0.84
SIK3-203ENST00000415541 CHMP5Q9NZZ3 219 aa9.8□□□□□ -0.84
SIK3-203ENST00000415541 UHRF1BP1LA0JNW5 1464 aa9.79□□□□□ -0.84
SIK3-203ENST00000415541 SAMD9LQ8IVG5 1584 aa9.79□□□□□ -0.84
SIK3-203ENST00000415541 MAPK8IP3Q9UPT6 1336 aa9.79□□□□□ -0.84
SIK3-203ENST00000415541 UHRF1BP1Q6BDS2 1440 aa9.79□□□□□ -0.84
SIK3-203ENST00000415541 ARHGEF12Q9NZN5 1544 aa9.78□□□□□ -0.84
SIK3-203ENST00000415541 SKOR2Q2VWA4 1001 aaPredicted RBP9.78□□□□□ -0.84
SIK3-203ENST00000415541 RRP7AQ9Y3A4 280 aaKnown RBP9.78□□□□□ -0.84
SIK3-203ENST00000415541 UQCRHLA0A096LP55 91 aa9.78□□□□□ -0.84
SIK3-203ENST00000415541 UQCRHP07919 91 aa9.78□□□□□ -0.84
SIK3-203ENST00000415541 CCDC94Q9BW85 323 aaPredicted RBP9.78□□□□□ -0.84
SIK3-203ENST00000415541 GGNBP2Q9H3C7 697 aa9.78□□□□□ -0.84
SIK3-203ENST00000415541 PRDM10Q9NQV6 1147 aa9.78□□□□□ -0.84
SIK3-203ENST00000415541 RIPK4P57078 832 aa9.78□□□□□ -0.84
SIK3-203ENST00000415541 ERBB4Q15303 1308 aa9.78□□□□□ -0.84
SIK3-203ENST00000415541 KDM5DQ9BY66 1539 aa9.77□□□□□ -0.84
SIK3-203ENST00000415541 RALGAPBQ86X10 1494 aa9.77□□□□□ -0.84
SIK3-203ENST00000415541 ZCCHC11Q5TAX3 1644 aaKnown RBP9.77□□□□□ -0.85
SIK3-203ENST00000415541 SKAP1Q86WV1 359 aa9.77□□□□□ -0.85
SIK3-203ENST00000415541 NOS1P29475 1434 aa9.77□□□□□ -0.85
SIK3-203ENST00000415541 KDM2BQ8NHM5 1336 aa9.77□□□□□ -0.85
SIK3-203ENST00000415541 PAXIP1Q6ZW49 1069 aaPredicted RBP9.77□□□□□ -0.85
SIK3-203ENST00000415541 NGDNQ8NEJ9 315 aaKnown RBP9.77□□□□□ -0.85
SIK3-203ENST00000415541 PLIN1O60240 522 aa9.76□□□□□ -0.85
SIK3-203ENST00000415541 ARID3AQ99856 593 aa9.76□□□□□ -0.85
SIK3-203ENST00000415541 CFAP65Q6ZU64 1925 aaKnown RBP9.76□□□□□ -0.85
SIK3-203ENST00000415541 RTEL1-TNFRSF6BF6WH68 1400 aa9.76□□□□□ -0.85
SIK3-203ENST00000415541 WAPLQ7Z5K2 1190 aa9.76□□□□□ -0.85
SIK3-203ENST00000415541 E9PCH4 1651 aa9.76□□□□□ -0.85
SIK3-203ENST00000415541 CGNL1Q0VF96 1302 aa9.76□□□□□ -0.85
SIK3-203ENST00000415541 DNTTIP2Q5QJE6 756 aaKnown RBP9.76□□□□□ -0.85
SIK3-203ENST00000415541 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.76□□□□□ -0.85
SIK3-203ENST00000415541 BRD4O60885 1362 aaPredicted RBP9.75□□□□□ -0.85
SIK3-203ENST00000415541 APAF1O14727 1248 aa9.75□□□□□ -0.85
SIK3-203ENST00000415541 ADAMTS8Q9UP79 889 aa9.75□□□□□ -0.85
SIK3-203ENST00000415541 RPGRIP1LQ68CZ1 1315 aa9.74□□□□□ -0.85
SIK3-203ENST00000415541 FTSJ3Q8IY81 847 aaKnown RBP9.74□□□□□ -0.85
SIK3-203ENST00000415541 GBP4Q96PP9 640 aa9.74□□□□□ -0.85
SIK3-203ENST00000415541 ANTXR1Q9H6X2 564 aa9.74□□□□□ -0.85
SIK3-203ENST00000415541 ATP7AQ04656 1500 aa9.74□□□□□ -0.85
SIK3-203ENST00000415541 CLASP1Q7Z460 1538 aa9.74□□□□□ -0.85
SIK3-203ENST00000415541 HS1BP3Q53T59 392 aa9.74□□□□□ -0.85
SIK3-203ENST00000415541 DISP3Q9P2K9 1392 aa9.74□□□□□ -0.85
SIK3-203ENST00000415541 MYO5CQ9NQX4 1742 aa9.74□□□□□ -0.85
SIK3-203ENST00000415541 PRAG1Q86YV5 1406 aa9.74□□□□□ -0.85
SIK3-203ENST00000415541 PPP2R1AP30153 589 aa9.73□□□□□ -0.85
SIK3-203ENST00000415541 CABP1Q9NZU7 370 aa9.73□□□□□ -0.85
SIK3-203ENST00000415541 NASPP49321 788 aaPredicted RBP9.73□□□□□ -0.85
SIK3-203ENST00000415541 SASS6Q6UVJ0 657 aa9.73□□□□□ -0.85
SIK3-203ENST00000415541 ARHGEF5Q12774 1597 aa9.73□□□□□ -0.85
SIK3-203ENST00000415541 GOLGA6L22H0YM25 854 aa9.72□□□□□ -0.85
SIK3-203ENST00000415541 MTHFSP49914 203 aa9.72□□□□□ -0.85
SIK3-203ENST00000415541 CDK19Q9BWU1 502 aa9.72□□□□□ -0.85
SIK3-203ENST00000415541 YEATS2Q9ULM3 1422 aa9.72□□□□□ -0.85
SIK3-203ENST00000415541 LRPPRCP42704 1394 aaKnown RBP9.72□□□□□ -0.85
SIK3-203ENST00000415541 PPP1R9BQ96SB3 815 aa9.72□□□□□ -0.85
SIK3-203ENST00000415541 C14orf93Q9H972 538 aaKnown RBP9.72□□□□□ -0.85
SIK3-203ENST00000415541 TESK2Q96S53 571 aa9.72□□□□□ -0.85
SIK3-203ENST00000415541 PREX2Q70Z35 1606 aa9.71□□□□□ -0.85
SIK3-203ENST00000415541 GOLGA2Q08379 1002 aa9.71□□□□□ -0.86
SIK3-203ENST00000415541 CDCA7LQ96GN5 454 aa9.71□□□□□ -0.86
SIK3-203ENST00000415541 POGZQ7Z3K3 1410 aa9.71□□□□□ -0.86
SIK3-203ENST00000415541 RBM33Q96EV2 1170 aaKnown RBP9.71□□□□□ -0.86
SIK3-203ENST00000415541 LTV1Q96GA3 475 aaPredicted RBP9.71□□□□□ -0.86
SIK3-203ENST00000415541 ZSCAN20P17040 1043 aaPredicted RBP9.7□□□□□ -0.86
SIK3-203ENST00000415541 MCM5P33992 734 aa9.7□□□□□ -0.86
SIK3-203ENST00000415541 HAP1P54257 671 aaPredicted RBP9.7□□□□□ -0.86
SIK3-203ENST00000415541 PMFBP1Q8TBY8 1022 aa9.7□□□□□ -0.86
SIK3-203ENST00000415541 TBC1D2Q9BYX2 928 aa9.7□□□□□ -0.86
SIK3-203ENST00000415541 CDC42BPBQ9Y5S2 1711 aa9.7□□□□□ -0.86
SIK3-203ENST00000415541 NUTM2GQ5VZR2 741 aa9.7□□□□□ -0.86
SIK3-203ENST00000415541 HSCBQ8IWL3 235 aa9.7□□□□□ -0.86
SIK3-203ENST00000415541 THEMISQ8N1K5 641 aaPredicted RBP9.7□□□□□ -0.86
SIK3-203ENST00000415541 TMEM51Q9NW97 253 aa9.7□□□□□ -0.86
SIK3-203ENST00000415541 ABCC1P33527 1531 aa9.7□□□□□ -0.86
SIK3-203ENST00000415541 SPRYD3Q8NCJ5 442 aa9.69□□□□□ -0.86
SIK3-203ENST00000415541 TRPM1Q7Z4N2 1603 aa9.69□□□□□ -0.86
SIK3-203ENST00000415541 ZNF500O60304 480 aaPredicted RBP9.69□□□□□ -0.86
SIK3-203ENST00000415541 COG3Q96JB2 828 aa9.69□□□□□ -0.86
SIK3-203ENST00000415541 PLCD3Q8N3E9 789 aa9.67□□□□□ -0.86
SIK3-203ENST00000415541 SCAF11Q99590 1463 aaKnown RBP9.67□□□□□ -0.86
SIK3-203ENST00000415541 A0A0G2JS52 829 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms