RNA–Protein interactions for RNA: ENST00000415357.1

LINC01090-201, Transcript of long intergenic non-protein coding RNA 1090, humanhuman

TSL 3 BASIC

Gene LINC01090, Length 881 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01090-201ENST00000415357 XRN1Q8IZH2 1706 aaKnown RBP14.21□□□□□ -0.13
LINC01090-201ENST00000415357 RGL3Q3MIN7 710 aa14.21□□□□□ -0.13
LINC01090-201ENST00000415357 AMOTL2Q9Y2J4 779 aa14.21□□□□□ -0.13
LINC01090-201ENST00000415357 SETD1AO15047 1707 aaKnown RBP14.2□□□□□ -0.14
LINC01090-201ENST00000415357 MSH6P52701 1360 aa14.2□□□□□ -0.14
LINC01090-201ENST00000415357 ACIN1Q9UKV3 1341 aaKnown RBP14.19□□□□□ -0.14
LINC01090-201ENST00000415357 IFT172Q9UG01 1749 aa14.18□□□□□ -0.14
LINC01090-201ENST00000415357 RPGRIP1LQ68CZ1 1315 aa14.18□□□□□ -0.14
LINC01090-201ENST00000415357 VGFO15240 615 aaPredicted RBP14.18□□□□□ -0.14
LINC01090-201ENST00000415357 ADGRF5Q8IZF2 1346 aa14.17□□□□□ -0.14
LINC01090-201ENST00000415357 C14orf37Q86TY3 774 aa14.17□□□□□ -0.14
LINC01090-201ENST00000415357 IFNLR1Q8IU57 520 aaPredicted RBP14.16□□□□□ -0.14
LINC01090-201ENST00000415357 KLHL34Q8N239 644 aa14.16□□□□□ -0.14
LINC01090-201ENST00000415357 ROBO1Q9Y6N7 1651 aa14.16□□□□□ -0.14
LINC01090-201ENST00000415357 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.15□□□□□ -0.14
LINC01090-201ENST00000415357 DISP3Q9P2K9 1392 aa14.15□□□□□ -0.14
LINC01090-201ENST00000415357 NCOA3Q9Y6Q9 1424 aa14.15□□□□□ -0.14
LINC01090-201ENST00000415357 ANKRD30BQ9BXX2 1392 aa14.14□□□□□ -0.15
LINC01090-201ENST00000415357 FAM135BQ49AJ0 1406 aa14.14□□□□□ -0.15
LINC01090-201ENST00000415357 HRCP23327 699 aa14.13□□□□□ -0.15
LINC01090-201ENST00000415357 ASXL1Q8IXJ9 1541 aa14.12□□□□□ -0.15
LINC01090-201ENST00000415357 SLAIN2Q9P270 581 aa14.12□□□□□ -0.15
LINC01090-201ENST00000415357 NALCNQ8IZF0 1738 aa14.12□□□□□ -0.15
LINC01090-201ENST00000415357 ROBO2Q9HCK4 1378 aa14.11□□□□□ -0.15
LINC01090-201ENST00000415357 PIK3C2GO75747 1445 aa14.11□□□□□ -0.15
LINC01090-201ENST00000415357 C19orf44Q9H6X5 657 aa14.11□□□□□ -0.15
LINC01090-201ENST00000415357 ZBTB47Q9UFB7 747 aaPredicted RBP14.11□□□□□ -0.15
LINC01090-201ENST00000415357 MED1Q15648 1581 aaPredicted RBP14.1□□□□□ -0.15
LINC01090-201ENST00000415357 PTCH1Q13635 1447 aa14.1□□□□□ -0.15
LINC01090-201ENST00000415357 ATF3P18847 181 aa14.1□□□□□ -0.15
LINC01090-201ENST00000415357 FARP1Q9Y4F1 1045 aaPredicted RBP14.1□□□□□ -0.15
LINC01090-201ENST00000415357 ADGRL3Q9HAR2 1447 aa14.09□□□□□ -0.15
LINC01090-201ENST00000415357 MNX1P50219 401 aaPredicted RBP14.09□□□□□ -0.15
LINC01090-201ENST00000415357 CADPS2Q86UW7 1296 aa14.09□□□□□ -0.15
LINC01090-201ENST00000415357 MYOM2P54296 1465 aa14.09□□□□□ -0.15
LINC01090-201ENST00000415357 DCCP43146 1447 aa14.07□□□□□ -0.16
LINC01090-201ENST00000415357 PRAG1Q86YV5 1406 aa14.07□□□□□ -0.16
LINC01090-201ENST00000415357 NRXN1Q9ULB1 1477 aa14.07□□□□□ -0.16
LINC01090-201ENST00000415357 TMEM132EQ6IEE7 984 aa14.07□□□□□ -0.16
LINC01090-201ENST00000415357 STK26Q9P289 416 aa14.07□□□□□ -0.16
LINC01090-201ENST00000415357 PHLPP1O60346 1717 aa14.07□□□□□ -0.16
LINC01090-201ENST00000415357 MST1RQ04912 1400 aa14.07□□□□□ -0.16
LINC01090-201ENST00000415357 CFAP70Q5T0N1 1121 aa14.05□□□□□ -0.16
LINC01090-201ENST00000415357 POTEHQ6S545 545 aa14.05□□□□□ -0.16
LINC01090-201ENST00000415357 LRPPRCP42704 1394 aaKnown RBP14.05□□□□□ -0.16
LINC01090-201ENST00000415357 COL16A1Q07092 1604 aaPredicted RBP14.04□□□□□ -0.16
LINC01090-201ENST00000415357 ILDR2Q71H61 639 aa14.04□□□□□ -0.16
LINC01090-201ENST00000415357 BRINP3Q76B58 766 aa14.04□□□□□ -0.16
LINC01090-201ENST00000415357 LAMC1P11047 1609 aa14.04□□□□□ -0.16
LINC01090-201ENST00000415357 KNDC1Q76NI1 1749 aa14.04□□□□□ -0.16
LINC01090-201ENST00000415357 C14orf93Q9H972 538 aaKnown RBP14.03□□□□□ -0.16
LINC01090-201ENST00000415357 KDM2AQ9Y2K7 1162 aa14.03□□□□□ -0.16
LINC01090-201ENST00000415357 DHX57Q6P158 1386 aaKnown RBP14.03□□□□□ -0.16
LINC01090-201ENST00000415357 PLEKHH1Q9ULM0 1364 aa14.03□□□□□ -0.16
LINC01090-201ENST00000415357 TECPR2O15040 1411 aa14.03□□□□□ -0.16
LINC01090-201ENST00000415357 YTHDC2Q9H6S0 1430 aaKnown RBP14.03□□□□□ -0.16
LINC01090-201ENST00000415357 AHDC1Q5TGY3 1603 aaPredicted RBP14.03□□□□□ -0.16
LINC01090-201ENST00000415357 WAPLQ7Z5K2 1190 aa14.02□□□□□ -0.17
LINC01090-201ENST00000415357 DCAF11Q8TEB1 546 aa14.02□□□□□ -0.17
LINC01090-201ENST00000415357 ABCC11Q96J66 1382 aa14.01□□□□□ -0.17
LINC01090-201ENST00000415357 C1orf167Q5SNV9 1468 aa14□□□□□ -0.17
LINC01090-201ENST00000415357 CDC42BPGQ6DT37 1551 aa14□□□□□ -0.17
LINC01090-201ENST00000415357 SPOCK2Q92563 424 aa13.99□□□□□ -0.17
LINC01090-201ENST00000415357 DDX17Q92841 729 aaKnown RBP13.99□□□□□ -0.17
LINC01090-201ENST00000415357 NHSL1Q5SYE7 1610 aa13.99□□□□□ -0.17
LINC01090-201ENST00000415357 ADGRB1O14514 1584 aa13.99□□□□□ -0.17
LINC01090-201ENST00000415357 JCADQ9P266 1359 aa13.97□□□□□ -0.17
LINC01090-201ENST00000415357 NUTM2FA1L443 756 aa13.96□□□□□ -0.17
LINC01090-201ENST00000415357 ORAI2Q96SN7 254 aa13.96□□□□□ -0.17
LINC01090-201ENST00000415357 SAFB2Q14151 953 aaKnown RBP eCLIP13.95□□□□□ -0.18
LINC01090-201ENST00000415357 PRAM1Q96QH2 718 aa13.95□□□□□ -0.18
LINC01090-201ENST00000415357 SHPRHQ149N8 1683 aa13.95□□□□□ -0.18
LINC01090-201ENST00000415357 LRP6O75581 1613 aa13.94□□□□□ -0.18
LINC01090-201ENST00000415357 TRIM26Q12899 539 aaPredicted RBP13.94□□□□□ -0.18
LINC01090-201ENST00000415357 SIN3AQ96ST3 1273 aa13.94□□□□□ -0.18
LINC01090-201ENST00000415357 DLC1Q96QB1 1528 aa13.94□□□□□ -0.18
LINC01090-201ENST00000415357 FMN2Q9NZ56 1722 aa13.93□□□□□ -0.18
LINC01090-201ENST00000415357 TRAK1Q9UPV9 953 aa13.93□□□□□ -0.18
LINC01090-201ENST00000415357 NUBP1P53384 320 aa13.92□□□□□ -0.18
LINC01090-201ENST00000415357 SIRT1Q96EB6 747 aa13.92□□□□□ -0.18
LINC01090-201ENST00000415357 ESCO1Q5FWF5 840 aa13.91□□□□□ -0.18
LINC01090-201ENST00000415357 STAC3Q96MF2 364 aa13.91□□□□□ -0.18
LINC01090-201ENST00000415357 POGKQ9P215 609 aa13.91□□□□□ -0.18
LINC01090-201ENST00000415357 RGS17Q9UGC6 210 aaPredicted RBP13.91□□□□□ -0.18
LINC01090-201ENST00000415357 NEUROD1Q13562 356 aa13.9□□□□□ -0.18
LINC01090-201ENST00000415357 RASEFQ8IZ41 740 aa13.9□□□□□ -0.18
LINC01090-201ENST00000415357 ARHGEF28Q8N1W1 1705 aaKnown RBP13.9□□□□□ -0.18
LINC01090-201ENST00000415357 L3MBTL2Q969R5 705 aa13.89□□□□□ -0.19
LINC01090-201ENST00000415357 HIRIP3Q9BW71 556 aaPredicted RBP13.89□□□□□ -0.19
LINC01090-201ENST00000415357 SPATA31A6Q5VVP1 1343 aa13.89□□□□□ -0.19
LINC01090-201ENST00000415357 ADGRB2O60241 1585 aa13.88□□□□□ -0.19
LINC01090-201ENST00000415357 PNPLA6Q8IY17 1366 aa13.88□□□□□ -0.19
LINC01090-201ENST00000415357 NUTM2BA6NNL0 878 aaPredicted RBP13.88□□□□□ -0.19
LINC01090-201ENST00000415357 NUTM2EB1AL46 878 aaPredicted RBP13.88□□□□□ -0.19
LINC01090-201ENST00000415357 XPCQ01831 940 aaPredicted RBP13.88□□□□□ -0.19
LINC01090-201ENST00000415357 NUTM2AQ8IVF1 878 aaPredicted RBP13.88□□□□□ -0.19
LINC01090-201ENST00000415357 SOS2Q07890 1332 aaPredicted RBP13.88□□□□□ -0.19
LINC01090-201ENST00000415357 MINK1Q8N4C8 1332 aaPredicted RBP13.88□□□□□ -0.19
LINC01090-201ENST00000415357 KIAA1210Q9ULL0 1709 aa13.87□□□□□ -0.19
LINC01090-201ENST00000415357 RGPD8O14715 1765 aaPredicted RBP13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms