RNA–Protein interactions for RNA: ENST00000415077.1

PPM1N-206, Transcript of protein phosphatase, Mg2+/Mn2+ dependent 1N (putative), humanhuman

TSL 1 (best)

Gene PPM1N, Length 1,953 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPM1N-206ENST00000415077 CABP2Q9NPB3 220 aa25.78■■□□□ 1.72
PPM1N-206ENST00000415077 ADAMTSL3P82987 1691 aa25.77■■□□□ 1.72
PPM1N-206ENST00000415077 SLIT1O75093 1534 aa25.77■■□□□ 1.72
PPM1N-206ENST00000415077 CARD14Q9BXL6 1004 aa25.77■■□□□ 1.72
PPM1N-206ENST00000415077 GTF3C3Q9Y5Q9 886 aa25.77■■□□□ 1.72
PPM1N-206ENST00000415077 SRPK2P78362 688 aaKnown RBP25.76■■□□□ 1.72
PPM1N-206ENST00000415077 PNISRQ8TF01 805 aaKnown RBP25.76■■□□□ 1.72
PPM1N-206ENST00000415077 NPC1L1Q9UHC9 1359 aa25.76■■□□□ 1.72
PPM1N-206ENST00000415077 WAPLQ7Z5K2 1190 aa25.76■■□□□ 1.71
PPM1N-206ENST00000415077 ARHGAP23Q9P227 1491 aa25.75■■□□□ 1.71
PPM1N-206ENST00000415077 ADAMTS13Q76LX8 1427 aa25.74■■□□□ 1.71
PPM1N-206ENST00000415077 PLEKHH1Q9ULM0 1364 aa25.7■■□□□ 1.71
PPM1N-206ENST00000415077 SIRT1Q96EB6 747 aa25.7■■□□□ 1.7
PPM1N-206ENST00000415077 CEP170BQ9Y4F5 1589 aaPredicted RBP25.7■■□□□ 1.7
PPM1N-206ENST00000415077 CDK19Q9BWU1 502 aa25.69■■□□□ 1.7
PPM1N-206ENST00000415077 ATAD2Q6PL18 1390 aa25.69■■□□□ 1.7
PPM1N-206ENST00000415077 NINLQ9Y2I6 1382 aa25.69■■□□□ 1.7
PPM1N-206ENST00000415077 TECPR2O15040 1411 aa25.69■■□□□ 1.7
PPM1N-206ENST00000415077 SLC26A8Q96RN1 970 aa25.68■■□□□ 1.7
PPM1N-206ENST00000415077 NSD3Q9BZ95 1437 aa25.68■■□□□ 1.7
PPM1N-206ENST00000415077 FAM135BQ49AJ0 1406 aa25.67■■□□□ 1.7
PPM1N-206ENST00000415077 ANKRD36BQ8N2N9 1353 aa25.67■■□□□ 1.7
PPM1N-206ENST00000415077 KNDC1Q76NI1 1749 aa25.67■■□□□ 1.7
PPM1N-206ENST00000415077 MED14O60244 1454 aa25.66■■□□□ 1.7
PPM1N-206ENST00000415077 PPP2R1AP30153 589 aa25.66■■□□□ 1.7
PPM1N-206ENST00000415077 TBX22Q9Y458 520 aa25.64■■□□□ 1.69
PPM1N-206ENST00000415077 CPS1P31327 1500 aa25.63■■□□□ 1.69
PPM1N-206ENST00000415077 SETD1BQ9UPS6 1966 aaKnown RBP25.62■■□□□ 1.69
PPM1N-206ENST00000415077 CGNL1Q0VF96 1302 aa25.61■■□□□ 1.69
PPM1N-206ENST00000415077 ZBED9Q6R2W3 1325 aa25.61■■□□□ 1.69
PPM1N-206ENST00000415077 TERF2IPQ9NYB0 399 aa25.6■■□□□ 1.69
PPM1N-206ENST00000415077 ROBO2Q9HCK4 1378 aa25.6■■□□□ 1.69
PPM1N-206ENST00000415077 WASLO00401 505 aaPredicted RBP25.59■■□□□ 1.69
PPM1N-206ENST00000415077 A0A1W2PP64 1363 aa25.59■■□□□ 1.69
PPM1N-206ENST00000415077 ZNF142P52746 1687 aaPredicted RBP25.58■■□□□ 1.69
PPM1N-206ENST00000415077 USP32Q8NFA0 1604 aa25.57■■□□□ 1.68
PPM1N-206ENST00000415077 ANKLE2Q86XL3 938 aa25.57■■□□□ 1.68
PPM1N-206ENST00000415077 CABP1Q9NZU7 370 aa25.57■■□□□ 1.68
PPM1N-206ENST00000415077 PTPRUQ92729 1446 aa25.57■■□□□ 1.68
PPM1N-206ENST00000415077 AMOTL2Q9Y2J4 779 aa25.56■■□□□ 1.68
PPM1N-206ENST00000415077 DIP2AQ14689 1571 aa25.56■■□□□ 1.68
PPM1N-206ENST00000415077 MORC1Q86VD1 984 aa25.56■■□□□ 1.68
PPM1N-206ENST00000415077 HDGFL2Q7Z4V5 671 aaPredicted RBP25.55■■□□□ 1.68
PPM1N-206ENST00000415077 CD163L1Q9NR16 1453 aa25.53■■□□□ 1.68
PPM1N-206ENST00000415077 NSD2O96028 1365 aa25.52■■□□□ 1.68
PPM1N-206ENST00000415077 TNNT2P45379 298 aaPredicted RBP25.49■■□□□ 1.67
PPM1N-206ENST00000415077 NUDT16Q96DE0 195 aaKnown RBP25.49■■□□□ 1.67
PPM1N-206ENST00000415077 INSRP06213 1382 aa25.48■■□□□ 1.67
PPM1N-206ENST00000415077 WDR43Q15061 677 aaKnown RBP eCLIP25.47■■□□□ 1.67
PPM1N-206ENST00000415077 PTCH1Q13635 1447 aa25.47■■□□□ 1.67
PPM1N-206ENST00000415077 ATP7BP35670 1465 aa25.47■■□□□ 1.67
PPM1N-206ENST00000415077 CCDC61Q9Y6R9 512 aa25.47■■□□□ 1.67
PPM1N-206ENST00000415077 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.47■■□□□ 1.67
PPM1N-206ENST00000415077 PIK3R4Q99570 1358 aa25.47■■□□□ 1.67
PPM1N-206ENST00000415077 PPIP5K1Q6PFW1 1433 aa25.46■■□□□ 1.67
PPM1N-206ENST00000415077 SENP3-EIF4A1A0A087X0R7 540 aa25.45■■□□□ 1.67
PPM1N-206ENST00000415077 ADAMTS8Q9UP79 889 aa25.45■■□□□ 1.67
PPM1N-206ENST00000415077 ADGRB2O60241 1585 aa25.45■■□□□ 1.66
PPM1N-206ENST00000415077 FYB1O15117 783 aa25.43■■□□□ 1.66
PPM1N-206ENST00000415077 GGNBP2Q9H3C7 697 aa25.42■■□□□ 1.66
PPM1N-206ENST00000415077 KCNA6P17658 529 aa25.42■■□□□ 1.66
PPM1N-206ENST00000415077 BLMP54132 1417 aaPredicted RBP25.42■■□□□ 1.66
PPM1N-206ENST00000415077 XRN1Q8IZH2 1706 aaKnown RBP25.41■■□□□ 1.66
PPM1N-206ENST00000415077 NCKAP5LQ9HCH0 1330 aa25.41■■□□□ 1.66
PPM1N-206ENST00000415077 POLR3AO14802 1390 aaPredicted RBP25.41■■□□□ 1.66
PPM1N-206ENST00000415077 PRR36Q9H6K5 1346 aa25.4■■□□□ 1.66
PPM1N-206ENST00000415077 CPSF1Q10570 1443 aaKnown RBP25.4■■□□□ 1.66
PPM1N-206ENST00000415077 MTHFSP49914 203 aa25.38■■□□□ 1.65
PPM1N-206ENST00000415077 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.38■■□□□ 1.65
PPM1N-206ENST00000415077 NUTM2FA1L443 756 aa25.36■■□□□ 1.65
PPM1N-206ENST00000415077 SALL2Q9Y467 1007 aaPredicted RBP25.36■■□□□ 1.65
PPM1N-206ENST00000415077 NPHP4O75161 1426 aaPredicted RBP25.36■■□□□ 1.65
PPM1N-206ENST00000415077 CDC42BPGQ6DT37 1551 aa25.36■■□□□ 1.65
PPM1N-206ENST00000415077 EDC4Q6P2E9 1401 aaKnown RBP25.35■■□□□ 1.65
PPM1N-206ENST00000415077 ZNF692Q9BU19 519 aaPredicted RBP25.35■■□□□ 1.65
PPM1N-206ENST00000415077 CFAP53Q96M91 514 aa25.34■■□□□ 1.65
PPM1N-206ENST00000415077 ANKRD26Q9UPS8 1709 aa25.34■■□□□ 1.65
PPM1N-206ENST00000415077 CHD2O14647 1828 aaKnown RBP25.33■■□□□ 1.65
PPM1N-206ENST00000415077 KIF20BQ96Q89 1820 aa25.33■■□□□ 1.65
PPM1N-206ENST00000415077 SUPT16HQ9Y5B9 1047 aaKnown RBP25.32■■□□□ 1.64
PPM1N-206ENST00000415077 SMG6Q86US8 1419 aaKnown RBP25.31■■□□□ 1.64
PPM1N-206ENST00000415077 PLEKHG3A1L390 1219 aa25.31■■□□□ 1.64
PPM1N-206ENST00000415077 NEFLP07196 543 aa25.31■■□□□ 1.64
PPM1N-206ENST00000415077 ITSN1Q15811 1721 aa25.29■■□□□ 1.64
PPM1N-206ENST00000415077 NUDCQ9Y266 331 aa25.29■■□□□ 1.64
PPM1N-206ENST00000415077 ACEP12821 1306 aa25.28■■□□□ 1.64
PPM1N-206ENST00000415077 TOPAZ1Q8N9V7 1692 aa25.28■■□□□ 1.64
PPM1N-206ENST00000415077 AKAP12Q02952 1782 aa25.28■■□□□ 1.64
PPM1N-206ENST00000415077 MON2Q7Z3U7 1717 aa25.28■■□□□ 1.64
PPM1N-206ENST00000415077 PDE3BQ13370 1112 aa25.27■■□□□ 1.64
PPM1N-206ENST00000415077 FKBP8Q14318 412 aa25.26■■□□□ 1.63
PPM1N-206ENST00000415077 CCDC146Q8IYE0 955 aa25.26■■□□□ 1.63
PPM1N-206ENST00000415077 NME9Q86XW9 330 aa25.25■■□□□ 1.63
PPM1N-206ENST00000415077 SHPRHQ149N8 1683 aa25.24■■□□□ 1.63
PPM1N-206ENST00000415077 NKTRP30414 1462 aaKnown RBP25.22■■□□□ 1.63
PPM1N-206ENST00000415077 PMFBP1Q8TBY8 1022 aa25.21■■□□□ 1.63
PPM1N-206ENST00000415077 RBM33Q96EV2 1170 aaKnown RBP25.21■■□□□ 1.63
PPM1N-206ENST00000415077 COG3Q96JB2 828 aa25.21■■□□□ 1.63
PPM1N-206ENST00000415077 ANKARQ7Z5J8 1434 aa25.21■■□□□ 1.63
PPM1N-206ENST00000415077 KDM4FA0A1W2PPD8 638 aa25.2■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms