RNA–Protein interactions for RNA: ENST00000414781.1

RAPGEF1-204, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-204ENST00000414781 PSDA5PKW4 1024 aaPredicted RBP20.78■□□□□ 0.92
RAPGEF1-204ENST00000414781 E9PCH4 1651 aa20.77■□□□□ 0.92
RAPGEF1-204ENST00000414781 BAG6P46379 1132 aa20.77■□□□□ 0.92
RAPGEF1-204ENST00000414781 GLI3P10071 1580 aa20.76■□□□□ 0.91
RAPGEF1-204ENST00000414781 SLIT2O94813 1529 aa20.75■□□□□ 0.91
RAPGEF1-204ENST00000414781 SEPT12Q8IYM1 358 aa20.74■□□□□ 0.91
RAPGEF1-204ENST00000414781 MARF1Q9Y4F3 1742 aaKnown RBP20.74■□□□□ 0.91
RAPGEF1-204ENST00000414781 YY1P25490 414 aa20.73■□□□□ 0.91
RAPGEF1-204ENST00000414781 PXDNQ92626 1479 aa20.73■□□□□ 0.91
RAPGEF1-204ENST00000414781 ZNF326Q5BKZ1 582 aaKnown RBP20.72■□□□□ 0.91
RAPGEF1-204ENST00000414781 KRT27Q7Z3Y8 459 aa20.71■□□□□ 0.91
RAPGEF1-204ENST00000414781 LRPPRCP42704 1394 aaKnown RBP20.71■□□□□ 0.91
RAPGEF1-204ENST00000414781 PRAG1Q86YV5 1406 aa20.7■□□□□ 0.9
RAPGEF1-204ENST00000414781 APLP2Q06481 763 aa20.69■□□□□ 0.9
RAPGEF1-204ENST00000414781 ROBO2Q9HCK4 1378 aa20.69■□□□□ 0.9
RAPGEF1-204ENST00000414781 ONECUT3O60422 494 aaPredicted RBP20.68■□□□□ 0.9
RAPGEF1-204ENST00000414781 VPS72Q15906 364 aa20.68■□□□□ 0.9
RAPGEF1-204ENST00000414781 HFM1A2PYH4 1435 aa20.68■□□□□ 0.9
RAPGEF1-204ENST00000414781 ESCO1Q5FWF5 840 aa20.67■□□□□ 0.9
RAPGEF1-204ENST00000414781 BRWD3Q6RI45 1802 aa20.66■□□□□ 0.9
RAPGEF1-204ENST00000414781 CDC42BPGQ6DT37 1551 aa20.63■□□□□ 0.89
RAPGEF1-204ENST00000414781 NUP155O75694 1391 aa20.63■□□□□ 0.89
RAPGEF1-204ENST00000414781 FOXO3O43524 673 aa20.63■□□□□ 0.89
RAPGEF1-204ENST00000414781 R3HDM1Q15032 1099 aaKnown RBP20.63■□□□□ 0.89
RAPGEF1-204ENST00000414781 NEXMIFQ5QGS0 1516 aa20.63■□□□□ 0.89
RAPGEF1-204ENST00000414781 FAM50AQ14320 339 aaKnown RBP20.62■□□□□ 0.89
RAPGEF1-204ENST00000414781 USP32Q8NFA0 1604 aa20.61■□□□□ 0.89
RAPGEF1-204ENST00000414781 XPCQ01831 940 aaPredicted RBP20.61■□□□□ 0.89
RAPGEF1-204ENST00000414781 CCDC9Q9Y3X0 531 aaKnown RBP20.6■□□□□ 0.89
RAPGEF1-204ENST00000414781 DISP2A7MBM2 1401 aa20.6■□□□□ 0.89
RAPGEF1-204ENST00000414781 SPATA31A3Q5VYP0 1347 aa20.59■□□□□ 0.89
RAPGEF1-204ENST00000414781 EN1Q05925 392 aaPredicted RBP20.58■□□□□ 0.89
RAPGEF1-204ENST00000414781 ROCK1Q13464 1354 aa20.58■□□□□ 0.88
RAPGEF1-204ENST00000414781 CCDC144AA2RUR9 1427 aa20.57■□□□□ 0.88
RAPGEF1-204ENST00000414781 HAP1P54257 671 aaPredicted RBP20.57■□□□□ 0.88
RAPGEF1-204ENST00000414781 A0A0G2JS52 829 aa20.56■□□□□ 0.88
RAPGEF1-204ENST00000414781 DCAF8L1A6NGE4 600 aa20.56■□□□□ 0.88
RAPGEF1-204ENST00000414781 VGFO15240 615 aaPredicted RBP20.56■□□□□ 0.88
RAPGEF1-204ENST00000414781 MYT1Q01538 1121 aa20.56■□□□□ 0.88
RAPGEF1-204ENST00000414781 RGPD1P0DJD0 1748 aa20.54■□□□□ 0.88
RAPGEF1-204ENST00000414781 NWD2Q9ULI1 1742 aa20.54■□□□□ 0.88
RAPGEF1-204ENST00000414781 NAIPQ13075 1403 aa20.51■□□□□ 0.87
RAPGEF1-204ENST00000414781 PARD3Q8TEW0 1356 aa20.5■□□□□ 0.87
RAPGEF1-204ENST00000414781 PLCH1Q4KWH8 1693 aa20.49■□□□□ 0.87
RAPGEF1-204ENST00000414781 TNS3Q68CZ2 1445 aa20.49■□□□□ 0.87
RAPGEF1-204ENST00000414781 ADGRB2O60241 1585 aa20.48■□□□□ 0.87
RAPGEF1-204ENST00000414781 FAM98CQ17RN3 349 aaKnown RBP20.48■□□□□ 0.87
RAPGEF1-204ENST00000414781 IFFO2Q5TF58 517 aa20.48■□□□□ 0.87
RAPGEF1-204ENST00000414781 KIF1AQ12756 1690 aa20.48■□□□□ 0.87
RAPGEF1-204ENST00000414781 CLTCL1P53675 1640 aa20.47■□□□□ 0.87
RAPGEF1-204ENST00000414781 KRT28Q7Z3Y7 464 aa20.47■□□□□ 0.87
RAPGEF1-204ENST00000414781 RPGRIP1LQ68CZ1 1315 aa20.47■□□□□ 0.87
RAPGEF1-204ENST00000414781 NINLQ9Y2I6 1382 aa20.46■□□□□ 0.87
RAPGEF1-204ENST00000414781 PSME1Q06323 249 aa20.46■□□□□ 0.87
RAPGEF1-204ENST00000414781 EZH2Q15910 746 aaKnown RBP20.46■□□□□ 0.87
RAPGEF1-204ENST00000414781 ARHGEF10O15013 1369 aa20.45■□□□□ 0.86
RAPGEF1-204ENST00000414781 CAMKK2Q96RR4 588 aa20.44■□□□□ 0.86
RAPGEF1-204ENST00000414781 PPP1R1BQ9UD71 204 aaPredicted RBP20.44■□□□□ 0.86
RAPGEF1-204ENST00000414781 NUTM2FA1L443 756 aa20.43■□□□□ 0.86
RAPGEF1-204ENST00000414781 CABLES1Q8TDN4 633 aa20.43■□□□□ 0.86
RAPGEF1-204ENST00000414781 SBNO1A3KN83 1393 aa20.43■□□□□ 0.86
RAPGEF1-204ENST00000414781 TECPR2O15040 1411 aa20.42■□□□□ 0.86
RAPGEF1-204ENST00000414781 TNS1Q9HBL0 1735 aaKnown RBP20.41■□□□□ 0.86
RAPGEF1-204ENST00000414781 FAM83GA6ND36 823 aa20.41■□□□□ 0.86
RAPGEF1-204ENST00000414781 NBPF8Q3BBV2 869 aa20.4■□□□□ 0.86
RAPGEF1-204ENST00000414781 NBPF14Q5TI25 921 aa20.4■□□□□ 0.86
RAPGEF1-204ENST00000414781 SPON1Q9HCB6 807 aa20.4■□□□□ 0.86
RAPGEF1-204ENST00000414781 KIF1BO60333 1816 aa20.39■□□□□ 0.86
RAPGEF1-204ENST00000414781 SENP3-EIF4A1A0A087X0R7 540 aa20.38■□□□□ 0.85
RAPGEF1-204ENST00000414781 FAM182BQ5T319 152 aa20.38■□□□□ 0.85
RAPGEF1-204ENST00000414781 FAM196AQ6ZSG2 479 aa20.38■□□□□ 0.85
RAPGEF1-204ENST00000414781 BTG4Q9NY30 223 aa20.38■□□□□ 0.85
RAPGEF1-204ENST00000414781 SPATA31A5Q5VU36 1347 aa20.37■□□□□ 0.85
RAPGEF1-204ENST00000414781 SPATA31A7Q8IWB4 1347 aa20.37■□□□□ 0.85
RAPGEF1-204ENST00000414781 NRAPQ86VF7 1730 aa20.37■□□□□ 0.85
RAPGEF1-204ENST00000414781 PHF8Q9UPP1 1060 aa20.37■□□□□ 0.85
RAPGEF1-204ENST00000414781 FMN2Q9NZ56 1722 aa20.36■□□□□ 0.85
RAPGEF1-204ENST00000414781 LMOD2Q6P5Q4 547 aa20.36■□□□□ 0.85
RAPGEF1-204ENST00000414781 ABCA3Q99758 1704 aa20.36■□□□□ 0.85
RAPGEF1-204ENST00000414781 KCNQ2O43526 872 aa20.35■□□□□ 0.85
RAPGEF1-204ENST00000414781 APBA3O96018 575 aa20.35■□□□□ 0.85
RAPGEF1-204ENST00000414781 WAPLQ7Z5K2 1190 aa20.35■□□□□ 0.85
RAPGEF1-204ENST00000414781 ZNF784Q8NCA9 323 aaPredicted RBP20.35■□□□□ 0.85
RAPGEF1-204ENST00000414781 THSD7AQ9UPZ6 1657 aa20.35■□□□□ 0.85
RAPGEF1-204ENST00000414781 RRBP1Q9P2E9 1410 aaKnown RBP20.35■□□□□ 0.85
RAPGEF1-204ENST00000414781 ABCC11Q96J66 1382 aa20.34■□□□□ 0.85
RAPGEF1-204ENST00000414781 PLEKHG5O94827 1062 aa20.34■□□□□ 0.85
RAPGEF1-204ENST00000414781 TRIM37O94972 964 aa20.34■□□□□ 0.85
RAPGEF1-204ENST00000414781 NRXN1Q9ULB1 1477 aa20.32■□□□□ 0.84
RAPGEF1-204ENST00000414781 STK26Q9P289 416 aa20.32■□□□□ 0.84
RAPGEF1-204ENST00000414781 COL14A1Q05707 1796 aaKnown RBP20.31■□□□□ 0.84
RAPGEF1-204ENST00000414781 PLEKHH1Q9ULM0 1364 aa20.3■□□□□ 0.84
RAPGEF1-204ENST00000414781 RREB1Q92766 1687 aa20.29■□□□□ 0.84
RAPGEF1-204ENST00000414781 C1QTNF8P60827 252 aa20.29■□□□□ 0.84
RAPGEF1-204ENST00000414781 PPLO60437 1756 aa20.28■□□□□ 0.84
RAPGEF1-204ENST00000414781 PPARGC1BQ86YN6 1023 aaKnown RBP20.27■□□□□ 0.84
RAPGEF1-204ENST00000414781 NUP188Q5SRE5 1749 aa20.27■□□□□ 0.83
RAPGEF1-204ENST00000414781 KNDC1Q76NI1 1749 aa20.27■□□□□ 0.83
RAPGEF1-204ENST00000414781 SIRT1Q96EB6 747 aa20.26■□□□□ 0.83
RAPGEF1-204ENST00000414781 SPATA31A1Q5TZJ5 1347 aa20.25■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms