RNA–Protein interactions for RNA: ENST00000414255.1

ZNF440-202, Transcript of zinc finger protein 440, humanhuman

TSL 2

Gene ZNF440, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF440-202ENST00000414255 FOXC1Q12948 553 aa9.07□□□□□ -0.96
ZNF440-202ENST00000414255 RNF19BQ6ZMZ0 732 aa9.06□□□□□ -0.96
ZNF440-202ENST00000414255 KDM4AO75164 1064 aa9.05□□□□□ -0.96
ZNF440-202ENST00000414255 PRDM9Q9NQV7 894 aa9.05□□□□□ -0.96
ZNF440-202ENST00000414255 MMP16P51512 607 aa9.03□□□□□ -0.96
ZNF440-202ENST00000414255 MDM2Q00987 491 aaPredicted RBP9.03□□□□□ -0.96
ZNF440-202ENST00000414255 CYP4X1Q8N118 509 aa9.03□□□□□ -0.96
ZNF440-202ENST00000414255 CRIPAKQ8N1N5 446 aa9.03□□□□□ -0.96
ZNF440-202ENST00000414255 TOR4AQ9NXH8 423 aa9.03□□□□□ -0.96
ZNF440-202ENST00000414255 CLCN1P35523 988 aa9.02□□□□□ -0.97
ZNF440-202ENST00000414255 USB1Q9BQ65 265 aaKnown RBP9.02□□□□□ -0.97
ZNF440-202ENST00000414255 AVPP01185 164 aa9.01□□□□□ -0.97
ZNF440-202ENST00000414255 CTC1Q2NKJ3 1217 aa9.01□□□□□ -0.97
ZNF440-202ENST00000414255 CCDC102AQ96A19 550 aa9.01□□□□□ -0.97
ZNF440-202ENST00000414255 ZNF775Q96BV0 537 aaPredicted RBP9.01□□□□□ -0.97
ZNF440-202ENST00000414255 GPCPD1Q9NPB8 672 aa9.01□□□□□ -0.97
ZNF440-202ENST00000414255 AAASQ9NRG9 546 aa9.01□□□□□ -0.97
ZNF440-202ENST00000414255 DXOO77932 396 aaKnown RBP8.99□□□□□ -0.97
ZNF440-202ENST00000414255 TRIM32Q13049 653 aa8.99□□□□□ -0.97
ZNF440-202ENST00000414255 TTC24A2A3L6 582 aaPredicted RBP8.98□□□□□ -0.97
ZNF440-202ENST00000414255 WNT7AO00755 349 aa8.98□□□□□ -0.97
ZNF440-202ENST00000414255 ST8SIA5O15466 376 aa8.98□□□□□ -0.97
ZNF440-202ENST00000414255 HOXA2O43364 376 aa8.98□□□□□ -0.97
ZNF440-202ENST00000414255 KRI1Q8N9T8 703 aaKnown RBP8.98□□□□□ -0.97
ZNF440-202ENST00000414255 REPIN1Q9BWE0 567 aaKnown RBP8.97□□□□□ -0.97
ZNF440-202ENST00000414255 FAM217BQ9NTX9 383 aaPredicted RBP8.97□□□□□ -0.97
ZNF440-202ENST00000414255 AXIN1O15169 862 aa8.96□□□□□ -0.98
ZNF440-202ENST00000414255 SMCPP49901 116 aaPredicted RBP8.96□□□□□ -0.98
ZNF440-202ENST00000414255 NUTM1Q86Y26 1132 aa8.95□□□□□ -0.98
ZNF440-202ENST00000414255 SNIP1Q8TAD8 396 aaKnown RBP8.95□□□□□ -0.98
ZNF440-202ENST00000414255 POTECB2RU33 542 aa8.94□□□□□ -0.98
ZNF440-202ENST00000414255 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.93□□□□□ -0.98
ZNF440-202ENST00000414255 JUNDP17535 347 aa8.92□□□□□ -0.98
ZNF440-202ENST00000414255 WNT7BP56706 349 aa8.92□□□□□ -0.98
ZNF440-202ENST00000414255 RETREG3Q86VR2 466 aa8.92□□□□□ -0.98
ZNF440-202ENST00000414255 CCDC24Q8N4L8 307 aa8.92□□□□□ -0.98
ZNF440-202ENST00000414255 HLA-CQ95604 372 aa8.92□□□□□ -0.98
ZNF440-202ENST00000414255 SUPT5HO00267 1087 aaKnown RBP8.9□□□□□ -0.98
ZNF440-202ENST00000414255 MRGPRX2Q96LB1 330 aa8.9□□□□□ -0.98
ZNF440-202ENST00000414255 SMPD1P17405 629 aa8.89□□□□□ -0.99
ZNF440-202ENST00000414255 GUCA2AQ02747 115 aa8.89□□□□□ -0.99
ZNF440-202ENST00000414255 ABCC9O60706 1549 aa8.89□□□□□ -0.99
ZNF440-202ENST00000414255 FDX1P10109 184 aa8.88□□□□□ -0.99
ZNF440-202ENST00000414255 C11orf95C9JLR9 678 aaPredicted RBP8.87□□□□□ -0.99
ZNF440-202ENST00000414255 SSTR3P32745 418 aaPredicted RBP8.87□□□□□ -0.99
ZNF440-202ENST00000414255 RC3H1Q5TC82 1133 aaKnown RBP8.87□□□□□ -0.99
ZNF440-202ENST00000414255 NUDT12Q9BQG2 462 aa8.87□□□□□ -0.99
ZNF440-202ENST00000414255 DACH1Q9UI36 760 aa8.87□□□□□ -0.99
ZNF440-202ENST00000414255 NACADO15069 1562 aa8.86□□□□□ -0.99
ZNF440-202ENST00000414255 TREML4Q6UXN2 200 aa8.86□□□□□ -0.99
ZNF440-202ENST00000414255 BARGINQ6ZT62 677 aa8.86□□□□□ -0.99
ZNF440-202ENST00000414255 GMPR2Q9P2T1 348 aaKnown RBP8.86□□□□□ -0.99
ZNF440-202ENST00000414255 C6orf229H3BNL8 230 aa8.85□□□□□ -0.99
ZNF440-202ENST00000414255 J3QL48 77 aa8.85□□□□□ -0.99
ZNF440-202ENST00000414255 TTLL12Q14166 644 aaPredicted RBP8.85□□□□□ -0.99
ZNF440-202ENST00000414255 AMHR2Q16671 573 aa8.85□□□□□ -0.99
ZNF440-202ENST00000414255 SYMPKQ92797 1274 aaKnown RBP8.85□□□□□ -0.99
ZNF440-202ENST00000414255 ZMYND10O75800 440 aa8.84□□□□□ -0.99
ZNF440-202ENST00000414255 SKOR1P84550 965 aa8.84□□□□□ -0.99
ZNF440-202ENST00000414255 SENP2Q9HC62 589 aa8.84□□□□□ -0.99
ZNF440-202ENST00000414255 CCNYL3P0C7X3 344 aa8.83□□□□□ -1
ZNF440-202ENST00000414255 MS4A1P11836 297 aa8.83□□□□□ -1
ZNF440-202ENST00000414255 SPIRE2Q8WWL2 714 aa8.83□□□□□ -1
ZNF440-202ENST00000414255 ATP13A2Q9NQ11 1180 aa8.83□□□□□ -1
ZNF440-202ENST00000414255 SPDYE5A6NIY4 337 aa8.82□□□□□ -1
ZNF440-202ENST00000414255 DIXDC1Q155Q3 683 aa8.82□□□□□ -1
ZNF440-202ENST00000414255 PTPRNQ16849 979 aa8.82□□□□□ -1
ZNF440-202ENST00000414255 PCDHGC3Q9UN70 934 aa8.82□□□□□ -1
ZNF440-202ENST00000414255 GIGYF2Q6Y7W6 1299 aaKnown RBP8.81□□□□□ -1
ZNF440-202ENST00000414255 EHBP1Q8NDI1 1231 aa8.81□□□□□ -1
ZNF440-202ENST00000414255 KIFC2Q96AC6 838 aa8.81□□□□□ -1
ZNF440-202ENST00000414255 GJA5P36382 358 aa8.8□□□□□ -1
ZNF440-202ENST00000414255 LCE2AQ5TA79 106 aaPredicted RBP8.8□□□□□ -1
ZNF440-202ENST00000414255 DESI1Q6ICB0 168 aa8.8□□□□□ -1
ZNF440-202ENST00000414255 ZC3H15Q8WU90 426 aaKnown RBP8.8□□□□□ -1
ZNF440-202ENST00000414255 HPS1Q92902 700 aa8.8□□□□□ -1
ZNF440-202ENST00000414255 WFS1O76024 890 aa8.79□□□□□ -1
ZNF440-202ENST00000414255 ALDH1A1P00352 501 aa8.79□□□□□ -1
ZNF440-202ENST00000414255 MTMR2Q13614 643 aa8.79□□□□□ -1
ZNF440-202ENST00000414255 TRIM47Q96LD4 638 aa8.79□□□□□ -1
ZNF440-202ENST00000414255 MOXD2PA6NHM9 499 aa8.78□□□□□ -1
ZNF440-202ENST00000414255 PTCRAQ6ISU1 281 aaPredicted RBP8.78□□□□□ -1
ZNF440-202ENST00000414255 EVA1BQ9NVM1 165 aa8.78□□□□□ -1
ZNF440-202ENST00000414255 SIAH2O43255 324 aa8.77□□□□□ -1.01
ZNF440-202ENST00000414255 SLC24A1O60721 1099 aa8.77□□□□□ -1.01
ZNF440-202ENST00000414255 NDUFV2P19404 249 aa8.77□□□□□ -1.01
ZNF440-202ENST00000414255 PRR7Q8TB68 274 aa8.77□□□□□ -1.01
ZNF440-202ENST00000414255 BEGAINQ9BUH8 593 aa8.77□□□□□ -1.01
ZNF440-202ENST00000414255 WASF2Q9Y6W5 498 aa8.77□□□□□ -1.01
ZNF440-202ENST00000414255 KCNH2Q12809 1159 aa8.76□□□□□ -1.01
ZNF440-202ENST00000414255 UNC93B1Q9H1C4 597 aa8.76□□□□□ -1.01
ZNF440-202ENST00000414255 SH3BP2P78314 561 aa8.75□□□□□ -1.01
ZNF440-202ENST00000414255 SCRIBQ14160 1630 aa8.74□□□□□ -1.01
ZNF440-202ENST00000414255 NFX1Q12986 1120 aaKnown RBP8.74□□□□□ -1.01
ZNF440-202ENST00000414255 PLEKHG3A1L390 1219 aa8.73□□□□□ -1.01
ZNF440-202ENST00000414255 SNRPBP14678 240 aaKnown RBP8.73□□□□□ -1.01
ZNF440-202ENST00000414255 TBC1D2Q9BYX2 928 aa8.73□□□□□ -1.01
ZNF440-202ENST00000414255 RSF1Q96T23 1441 aaPredicted RBP8.72□□□□□ -1.01
ZNF440-202ENST00000414255 VARSP26640 1264 aaKnown RBP8.72□□□□□ -1.01
ZNF440-202ENST00000414255 RSBN1LQ6PCB5 846 aaPredicted RBP8.72□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms