RNA–Protein interactions for RNA: ENST00000414142.5

SNHG17-202, Transcript of small nucleolar RNA host gene 17, humanhuman

TSL 2

Gene SNHG17, Length 2,102 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG17-202ENST00000414142 C3P01024 1663 aa18.37■□□□□ 0.53
SNHG17-202ENST00000414142 SETD1AO15047 1707 aaKnown RBP18.37■□□□□ 0.53
SNHG17-202ENST00000414142 TMEM2Q9UHN6 1383 aa18.37■□□□□ 0.53
SNHG17-202ENST00000414142 NLRP1Q9C000 1473 aa18.37■□□□□ 0.53
SNHG17-202ENST00000414142 NRXN3Q9Y4C0 1643 aa18.36■□□□□ 0.53
SNHG17-202ENST00000414142 DNAJC5Q9H3Z4 198 aa18.35■□□□□ 0.53
SNHG17-202ENST00000414142 DLC1Q96QB1 1528 aa18.34■□□□□ 0.53
SNHG17-202ENST00000414142 ABCC11Q96J66 1382 aa18.34■□□□□ 0.53
SNHG17-202ENST00000414142 WDR43Q15061 677 aaKnown RBP eCLIP18.34■□□□□ 0.53
SNHG17-202ENST00000414142 WAPLQ7Z5K2 1190 aa18.34■□□□□ 0.53
SNHG17-202ENST00000414142 ANKRD36BQ8N2N9 1353 aa18.33■□□□□ 0.53
SNHG17-202ENST00000414142 METP08581 1390 aa18.33■□□□□ 0.52
SNHG17-202ENST00000414142 ATAD2Q6PL18 1390 aa18.33■□□□□ 0.52
SNHG17-202ENST00000414142 MORC1Q86VD1 984 aa18.32■□□□□ 0.52
SNHG17-202ENST00000414142 CDK19Q9BWU1 502 aa18.32■□□□□ 0.52
SNHG17-202ENST00000414142 NINLQ9Y2I6 1382 aa18.32■□□□□ 0.52
SNHG17-202ENST00000414142 CGNL1Q0VF96 1302 aa18.32■□□□□ 0.52
SNHG17-202ENST00000414142 INSRP06213 1382 aa18.32■□□□□ 0.52
SNHG17-202ENST00000414142 SALL2Q9Y467 1007 aaPredicted RBP18.31■□□□□ 0.52
SNHG17-202ENST00000414142 SMG6Q86US8 1419 aaKnown RBP18.31■□□□□ 0.52
SNHG17-202ENST00000414142 ADAMTS8Q9UP79 889 aa18.31■□□□□ 0.52
SNHG17-202ENST00000414142 TXNDC2Q86VQ3 553 aa18.3■□□□□ 0.52
SNHG17-202ENST00000414142 NUDCQ9Y266 331 aa18.3■□□□□ 0.52
SNHG17-202ENST00000414142 PLEKHH1Q9ULM0 1364 aa18.3■□□□□ 0.52
SNHG17-202ENST00000414142 USP32Q8NFA0 1604 aa18.29■□□□□ 0.52
SNHG17-202ENST00000414142 EID1Q9Y6B2 187 aa18.29■□□□□ 0.52
SNHG17-202ENST00000414142 BLMP54132 1417 aaPredicted RBP18.29■□□□□ 0.52
SNHG17-202ENST00000414142 LTKP29376 864 aa18.29■□□□□ 0.52
SNHG17-202ENST00000414142 TERF2IPQ9NYB0 399 aa18.28■□□□□ 0.52
SNHG17-202ENST00000414142 TNNT2P45379 298 aaPredicted RBP18.28■□□□□ 0.52
SNHG17-202ENST00000414142 A0A1W2PP64 1363 aa18.27■□□□□ 0.51
SNHG17-202ENST00000414142 PLEKHG1Q9ULL1 1385 aa18.27■□□□□ 0.51
SNHG17-202ENST00000414142 THEMISQ8N1K5 641 aaPredicted RBP18.25■□□□□ 0.51
SNHG17-202ENST00000414142 SIRT1Q96EB6 747 aa18.25■□□□□ 0.51
SNHG17-202ENST00000414142 KNDC1Q76NI1 1749 aa18.25■□□□□ 0.51
SNHG17-202ENST00000414142 IRX6P78412 446 aaPredicted RBP18.25■□□□□ 0.51
SNHG17-202ENST00000414142 HDGFL2Q7Z4V5 671 aaPredicted RBP18.25■□□□□ 0.51
SNHG17-202ENST00000414142 NSD2O96028 1365 aa18.24■□□□□ 0.51
SNHG17-202ENST00000414142 ADAMTS13Q76LX8 1427 aa18.24■□□□□ 0.51
SNHG17-202ENST00000414142 ERICH6BQ5W0A0 696 aa18.24■□□□□ 0.51
SNHG17-202ENST00000414142 CABP1Q9NZU7 370 aa18.24■□□□□ 0.51
SNHG17-202ENST00000414142 FAM135BQ49AJ0 1406 aa18.23■□□□□ 0.51
SNHG17-202ENST00000414142 PDE3BQ13370 1112 aa18.23■□□□□ 0.51
SNHG17-202ENST00000414142 RIMS1Q86UR5 1692 aaKnown RBP18.22■□□□□ 0.51
SNHG17-202ENST00000414142 WASLO00401 505 aaPredicted RBP18.22■□□□□ 0.51
SNHG17-202ENST00000414142 TECPR2O15040 1411 aa18.22■□□□□ 0.51
SNHG17-202ENST00000414142 SLIT1O75093 1534 aa18.22■□□□□ 0.51
SNHG17-202ENST00000414142 SLC26A8Q96RN1 970 aa18.22■□□□□ 0.51
SNHG17-202ENST00000414142 POLR3AO14802 1390 aaPredicted RBP18.21■□□□□ 0.51
SNHG17-202ENST00000414142 ARHGAP23Q9P227 1491 aa18.21■□□□□ 0.51
SNHG17-202ENST00000414142 CPS1P31327 1500 aa18.21■□□□□ 0.51
SNHG17-202ENST00000414142 CD163L1Q9NR16 1453 aa18.2■□□□□ 0.5
SNHG17-202ENST00000414142 MTHFSP49914 203 aa18.19■□□□□ 0.5
SNHG17-202ENST00000414142 GGNBP2Q9H3C7 697 aa18.19■□□□□ 0.5
SNHG17-202ENST00000414142 ROBO2Q9HCK4 1378 aa18.18■□□□□ 0.5
SNHG17-202ENST00000414142 CCDC146Q8IYE0 955 aa18.17■□□□□ 0.5
SNHG17-202ENST00000414142 CFAP53Q96M91 514 aa18.17■□□□□ 0.5
SNHG17-202ENST00000414142 MED14O60244 1454 aa18.17■□□□□ 0.5
SNHG17-202ENST00000414142 FYB1O15117 783 aa18.17■□□□□ 0.5
SNHG17-202ENST00000414142 CDCA7LQ96GN5 454 aa18.16■□□□□ 0.5
SNHG17-202ENST00000414142 TBX22Q9Y458 520 aa18.16■□□□□ 0.5
SNHG17-202ENST00000414142 NUDT16Q96DE0 195 aaKnown RBP18.16■□□□□ 0.5
SNHG17-202ENST00000414142 ATP7BP35670 1465 aa18.15■□□□□ 0.5
SNHG17-202ENST00000414142 CEP170BQ9Y4F5 1589 aaPredicted RBP18.15■□□□□ 0.5
SNHG17-202ENST00000414142 PPIP5K1Q6PFW1 1433 aa18.15■□□□□ 0.5
SNHG17-202ENST00000414142 ANKRD26Q9UPS8 1709 aa18.14■□□□□ 0.49
SNHG17-202ENST00000414142 TSHZ2Q9NRE2 1034 aa18.14■□□□□ 0.49
SNHG17-202ENST00000414142 AMOTL2Q9Y2J4 779 aa18.14■□□□□ 0.49
SNHG17-202ENST00000414142 PTPRUQ92729 1446 aa18.13■□□□□ 0.49
SNHG17-202ENST00000414142 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.13■□□□□ 0.497e-6■■□□□ 11.5
SNHG17-202ENST00000414142 ADAMTSL3P82987 1691 aa18.13■□□□□ 0.49
SNHG17-202ENST00000414142 CCDC61Q9Y6R9 512 aa18.13■□□□□ 0.49
SNHG17-202ENST00000414142 KIF20BQ96Q89 1820 aa18.13■□□□□ 0.49
SNHG17-202ENST00000414142 APAF1O14727 1248 aa18.12■□□□□ 0.49
SNHG17-202ENST00000414142 SHPRHQ149N8 1683 aa18.12■□□□□ 0.49
SNHG17-202ENST00000414142 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.11■□□□□ 0.49
SNHG17-202ENST00000414142 RNF123Q5XPI4 1314 aa18.11■□□□□ 0.49
SNHG17-202ENST00000414142 NCKAP5LQ9HCH0 1330 aa18.11■□□□□ 0.49
SNHG17-202ENST00000414142 DIP2AQ14689 1571 aa18.1■□□□□ 0.49
SNHG17-202ENST00000414142 RCAN3Q9UKA8 241 aa18.1■□□□□ 0.49
SNHG17-202ENST00000414142 CPSF1Q10570 1443 aaKnown RBP18.09■□□□□ 0.49
SNHG17-202ENST00000414142 PPP4R2Q9NY27 417 aa18.08■□□□□ 0.49
SNHG17-202ENST00000414142 SETD1BQ9UPS6 1966 aaKnown RBP18.08■□□□□ 0.49
SNHG17-202ENST00000414142 ADGRB2O60241 1585 aa18.08■□□□□ 0.48
SNHG17-202ENST00000414142 GOLGA2Q08379 1002 aa18.08■□□□□ 0.48
SNHG17-202ENST00000414142 PRR36Q9H6K5 1346 aa18.08■□□□□ 0.48
SNHG17-202ENST00000414142 ANKLE2Q86XL3 938 aa18.07■□□□□ 0.48
SNHG17-202ENST00000414142 EDC4Q6P2E9 1401 aaKnown RBP18.07■□□□□ 0.48
SNHG17-202ENST00000414142 CDC42BPGQ6DT37 1551 aa18.07■□□□□ 0.48
SNHG17-202ENST00000414142 ZNF521Q96K83 1311 aa18.07■□□□□ 0.48
SNHG17-202ENST00000414142 NUTM2FA1L443 756 aa18.06■□□□□ 0.48
SNHG17-202ENST00000414142 NGEFQ8N5V2 710 aa18.06■□□□□ 0.48
SNHG17-202ENST00000414142 RUNDC1Q96C34 613 aa18.06■□□□□ 0.48
SNHG17-202ENST00000414142 ZNF692Q9BU19 519 aaPredicted RBP18.05■□□□□ 0.48
SNHG17-202ENST00000414142 ITSN1Q15811 1721 aa18.05■□□□□ 0.48
SNHG17-202ENST00000414142 PTCH1Q13635 1447 aa18.05■□□□□ 0.48
SNHG17-202ENST00000414142 U2AF1L5P0DN76 240 aaPredicted RBP18.05■□□□□ 0.48
SNHG17-202ENST00000414142 U2AF1Q01081 240 aaKnown RBP eCLIP18.05■□□□□ 0.48
SNHG17-202ENST00000414142 ZNF142P52746 1687 aaPredicted RBP18.04■□□□□ 0.48
SNHG17-202ENST00000414142 AKAP12Q02952 1782 aa18.03■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms