RNA–Protein interactions for RNA: ENST00000413806.7

SMARCA4-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 5 BASIC

Gene SMARCA4, Length 5,512 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-202ENST00000413806 ERC2O15083 957 aa16.67■□□□□ 0.26
SMARCA4-202ENST00000413806 G3BP1Q13283 466 aaKnown RBP eCLIP16.67■□□□□ 0.262e-7■■□□□ 14.1
SMARCA4-202ENST00000413806 GTF2E1P29083 439 aaPredicted RBP16.67■□□□□ 0.26
SMARCA4-202ENST00000413806 LNPKQ9C0E8 428 aa16.66■□□□□ 0.26
SMARCA4-202ENST00000413806 GGNBP2Q9H3C7 697 aa16.66■□□□□ 0.26
SMARCA4-202ENST00000413806 TROQ12816 1431 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-202ENST00000413806 IFT140Q96RY7 1462 aa16.65■□□□□ 0.26
SMARCA4-202ENST00000413806 PDE3AQ14432 1141 aa16.65■□□□□ 0.26
SMARCA4-202ENST00000413806 CABP2Q9NPB3 220 aa16.65■□□□□ 0.26
SMARCA4-202ENST00000413806 TPD52L1Q16890 204 aaPredicted RBP16.65■□□□□ 0.26
SMARCA4-202ENST00000413806 SMG6Q86US8 1419 aaKnown RBP16.65■□□□□ 0.26
SMARCA4-202ENST00000413806 TCP11L2Q8N4U5 519 aa16.64■□□□□ 0.25
SMARCA4-202ENST00000413806 MTHFSP49914 203 aa16.64■□□□□ 0.25
SMARCA4-202ENST00000413806 MRC2Q9UBG0 1479 aa16.64■□□□□ 0.25
SMARCA4-202ENST00000413806 MCTP1Q6DN14 999 aa16.64■□□□□ 0.25
SMARCA4-202ENST00000413806 TPM1P09493 284 aa16.64■□□□□ 0.25
SMARCA4-202ENST00000413806 TRIM29Q14134 588 aa16.64■□□□□ 0.25
SMARCA4-202ENST00000413806 G3V3G9 751 aa16.63■□□□□ 0.25
SMARCA4-202ENST00000413806 HMOX1P09601 288 aa16.63■□□□□ 0.25
SMARCA4-202ENST00000413806 DAPK1P53355 1430 aa16.63■□□□□ 0.25
SMARCA4-202ENST00000413806 DCAF8Q5TAQ9 597 aa16.63■□□□□ 0.25
SMARCA4-202ENST00000413806 MRE11P49959 708 aa16.63■□□□□ 0.25
SMARCA4-202ENST00000413806 SMC3Q9UQE7 1217 aa16.63■□□□□ 0.25
SMARCA4-202ENST00000413806 TSR1Q2NL82 804 aaKnown RBP16.63■□□□□ 0.25
SMARCA4-202ENST00000413806 CREBRFQ8IUR6 639 aa16.63■□□□□ 0.25
SMARCA4-202ENST00000413806 TOPBP1Q92547 1522 aa16.63■□□□□ 0.25
SMARCA4-202ENST00000413806 PSME1Q06323 249 aa16.62■□□□□ 0.25
SMARCA4-202ENST00000413806 FOXD4L6Q3SYB3 417 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-202ENST00000413806 FOXD4L3Q6VB84 417 aaPredicted RBP16.62■□□□□ 0.25
SMARCA4-202ENST00000413806 MARCH6O60337 910 aa16.62■□□□□ 0.25
SMARCA4-202ENST00000413806 CWC15Q9P013 229 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-202ENST00000413806 RRP9O43818 475 aaKnown RBP16.62■□□□□ 0.25
SMARCA4-202ENST00000413806 PRG4Q92954 1404 aaPredicted RBP16.61■□□□□ 0.25
SMARCA4-202ENST00000413806 RBM10P98175 930 aaKnown RBP16.61■□□□□ 0.25
SMARCA4-202ENST00000413806 CDCA7LQ96GN5 454 aa16.61■□□□□ 0.25
SMARCA4-202ENST00000413806 EVA1CP58658 441 aa16.61■□□□□ 0.25
SMARCA4-202ENST00000413806 CFAP70Q5T0N1 1121 aa16.61■□□□□ 0.25
SMARCA4-202ENST00000413806 NECTIN2Q92692 538 aa16.61■□□□□ 0.25
SMARCA4-202ENST00000413806 CT47B1P0C2W7 299 aaPredicted RBP16.61■□□□□ 0.25
SMARCA4-202ENST00000413806 CPLX1O14810 134 aa16.6■□□□□ 0.25
SMARCA4-202ENST00000413806 NBPF8Q3BBV2 869 aa16.6■□□□□ 0.25
SMARCA4-202ENST00000413806 ERBINQ96RT1 1412 aa16.6■□□□□ 0.25
SMARCA4-202ENST00000413806 HOOK1Q9UJC3 728 aaKnown RBP16.6■□□□□ 0.25
SMARCA4-202ENST00000413806 TMEM132EQ6IEE7 984 aa16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 ARGLU1Q9NWB6 273 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 CCDC39Q9UFE4 941 aa16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 UBTFL1P0CB47 393 aaPredicted RBP16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 TRDNQ13061 729 aa16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 CCDC70Q6NSX1 233 aa16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 BICD2Q8TD16 824 aa16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 PNISRQ8TF01 805 aaKnown RBP16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 GCC1Q96CN9 775 aa16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 GNAI3P08754 354 aa16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 CYB5RLQ6IPT4 315 aa16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 AMOTL1Q8IY63 956 aa16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 DNMBPQ6XZF7 1577 aa16.59■□□□□ 0.25
SMARCA4-202ENST00000413806 POLA1P09884 1462 aaPredicted RBP16.58■□□□□ 0.25
SMARCA4-202ENST00000413806 GAS2L2Q8NHY3 880 aa16.58■□□□□ 0.24
SMARCA4-202ENST00000413806 WDR97A6NE52 1622 aa16.57■□□□□ 0.24
SMARCA4-202ENST00000413806 NBPF1Q3BBV0 1214 aa16.57■□□□□ 0.24
SMARCA4-202ENST00000413806 WDR63Q8IWG1 891 aa16.57■□□□□ 0.24
SMARCA4-202ENST00000413806 PDZRN3Q9UPQ7 1066 aa16.57■□□□□ 0.24
SMARCA4-202ENST00000413806 CCDC30Q5VVM6 783 aa16.56■□□□□ 0.24
SMARCA4-202ENST00000413806 VPS37CA5D8V6 355 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-202ENST00000413806 AFAP1Q8N556 730 aa16.56■□□□□ 0.24
SMARCA4-202ENST00000413806 NOL10Q9BSC4 688 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-202ENST00000413806 PES1O00541 588 aaKnown RBP16.56■□□□□ 0.24
SMARCA4-202ENST00000413806 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.56■□□□□ 0.24
SMARCA4-202ENST00000413806 SASS6Q6UVJ0 657 aa16.56■□□□□ 0.24
SMARCA4-202ENST00000413806 AKNAQ7Z591 1439 aa16.56■□□□□ 0.24
SMARCA4-202ENST00000413806 CNTROBQ8N137 903 aa16.56■□□□□ 0.24
SMARCA4-202ENST00000413806 PSMA5P28066 241 aa16.55■□□□□ 0.24
SMARCA4-202ENST00000413806 MCM2P49736 904 aa16.55■□□□□ 0.24
SMARCA4-202ENST00000413806 EXOSC9Q06265 439 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-202ENST00000413806 CCDC47Q96A33 483 aaKnown RBP16.55■□□□□ 0.24
SMARCA4-202ENST00000413806 FAM69CQ0P6D2 419 aa16.55■□□□□ 0.24
SMARCA4-202ENST00000413806 ANKRD20A12PQ8NF67 263 aa16.55■□□□□ 0.24
SMARCA4-202ENST00000413806 RAPGEF4Q8WZA2 1011 aa16.55■□□□□ 0.24
SMARCA4-202ENST00000413806 NASPP49321 788 aaPredicted RBP16.55■□□□□ 0.24
SMARCA4-202ENST00000413806 CEP89Q96ST8 783 aa16.54■□□□□ 0.24
SMARCA4-202ENST00000413806 PRKAR2BP31323 418 aa16.54■□□□□ 0.24
SMARCA4-202ENST00000413806 RABEP1Q15276 862 aa16.54■□□□□ 0.24
SMARCA4-202ENST00000413806 UBE2Q2Q8WVN8 375 aa16.54■□□□□ 0.24
SMARCA4-202ENST00000413806 CCDC73Q6ZRK6 1079 aa16.53■□□□□ 0.24
SMARCA4-202ENST00000413806 RIC3Q7Z5B4 369 aa16.53■□□□□ 0.24
SMARCA4-202ENST00000413806 HOMER1Q86YM7 354 aa16.53■□□□□ 0.24
SMARCA4-202ENST00000413806 PDE4CQ08493 712 aa16.53■□□□□ 0.24
SMARCA4-202ENST00000413806 LETM1O95202 739 aaPredicted RBP16.53■□□□□ 0.24
SMARCA4-202ENST00000413806 MAP3K1Q13233 1512 aa16.53■□□□□ 0.24
SMARCA4-202ENST00000413806 IFT57Q9NWB7 429 aa16.53■□□□□ 0.24
SMARCA4-202ENST00000413806 NAIPQ13075 1403 aa16.52■□□□□ 0.24
SMARCA4-202ENST00000413806 TWISTNBQ3B726 338 aaPredicted RBP16.52■□□□□ 0.24
SMARCA4-202ENST00000413806 RPGRIP1LQ68CZ1 1315 aa16.52■□□□□ 0.24
SMARCA4-202ENST00000413806 ERICH2A1L162 156 aa16.52■□□□□ 0.23
SMARCA4-202ENST00000413806 RDXP35241 583 aaKnown RBP16.52■□□□□ 0.23
SMARCA4-202ENST00000413806 VPS53Q5VIR6 699 aa16.52■□□□□ 0.23
SMARCA4-202ENST00000413806 ACBD3Q9H3P7 528 aa16.52■□□□□ 0.23
SMARCA4-202ENST00000413806 MBD3O95983 291 aa16.51■□□□□ 0.23
SMARCA4-202ENST00000413806 HIP1O00291 1037 aa16.51■□□□□ 0.23
SMARCA4-202ENST00000413806 EPRSP07814 1512 aaKnown RBP16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms