RNA–Protein interactions for RNA: ENST00000413366.7

PRKCA-202, Transcript of protein kinase C alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRKCA, Length 8,751 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-202ENST00000413366 KIF15Q9NS87 1388 aa9.17□□□□□ -0.94
PRKCA-202ENST00000413366 RDXP35241 583 aaKnown RBP9.17□□□□□ -0.94
PRKCA-202ENST00000413366 AIMP1Q12904 312 aaKnown RBP9.17□□□□□ -0.94
PRKCA-202ENST00000413366 RUFY2Q8WXA3 655 aa9.17□□□□□ -0.94
PRKCA-202ENST00000413366 ST18O60284 1047 aa9.17□□□□□ -0.94
PRKCA-202ENST00000413366 TSPYL4Q9UJ04 414 aa9.17□□□□□ -0.94
PRKCA-202ENST00000413366 NLRP6P59044 892 aa9.17□□□□□ -0.94
PRKCA-202ENST00000413366 ELL2O00472 640 aaPredicted RBP9.17□□□□□ -0.94
PRKCA-202ENST00000413366 TATP17735 454 aaPredicted RBP9.17□□□□□ -0.94
PRKCA-202ENST00000413366 SLC4A3P48751 1232 aa9.16□□□□□ -0.94
PRKCA-202ENST00000413366 CCAR2Q8N163 923 aaKnown RBP9.16□□□□□ -0.94
PRKCA-202ENST00000413366 CCDC191Q8NCU4 936 aa9.16□□□□□ -0.94
PRKCA-202ENST00000413366 FGD5Q6ZNL6 1462 aa9.16□□□□□ -0.94
PRKCA-202ENST00000413366 CLUAP1Q96AJ1 413 aa9.16□□□□□ -0.94
PRKCA-202ENST00000413366 RBM10P98175 930 aaKnown RBP9.16□□□□□ -0.94
PRKCA-202ENST00000413366 AK7Q96M32 723 aa9.16□□□□□ -0.94
PRKCA-202ENST00000413366 PCMTD1Q96MG8 357 aaPredicted RBP9.16□□□□□ -0.94
PRKCA-202ENST00000413366 SLC3A2P08195 630 aaKnown RBP9.16□□□□□ -0.94
PRKCA-202ENST00000413366 ACBD3Q9H3P7 528 aa9.16□□□□□ -0.94
PRKCA-202ENST00000413366 FBXO3Q9UK99 471 aa9.16□□□□□ -0.94
PRKCA-202ENST00000413366 SYNJ2O15056 1496 aa9.16□□□□□ -0.94
PRKCA-202ENST00000413366 BRPF3Q9ULD4 1205 aa9.15□□□□□ -0.94
PRKCA-202ENST00000413366 CUX1P39880 1505 aa9.15□□□□□ -0.94
PRKCA-202ENST00000413366 CDR1P51861 262 aa9.15□□□□□ -0.94
PRKCA-202ENST00000413366 PANK3Q9H999 370 aa9.15□□□□□ -0.94
PRKCA-202ENST00000413366 AQRO60306 1485 aaKnown RBP eCLIP9.15□□□□□ -0.94
PRKCA-202ENST00000413366 PLEKHO1Q53GL0 409 aaPredicted RBP9.15□□□□□ -0.94
PRKCA-202ENST00000413366 MCTP1Q6DN14 999 aa9.15□□□□□ -0.94
PRKCA-202ENST00000413366 IRX3P78415 501 aaPredicted RBP9.15□□□□□ -0.94
PRKCA-202ENST00000413366 TPM1P09493 284 aa9.15□□□□□ -0.94
PRKCA-202ENST00000413366 ARGLU1Q9NWB6 273 aaPredicted RBP9.15□□□□□ -0.94
PRKCA-202ENST00000413366 CLGNO14967 610 aa9.15□□□□□ -0.95
PRKCA-202ENST00000413366 CABP4P57796 275 aa9.15□□□□□ -0.95
PRKCA-202ENST00000413366 GNL3LQ9NVN8 582 aaKnown RBP9.15□□□□□ -0.95
PRKCA-202ENST00000413366 CPLX1O14810 134 aa9.14□□□□□ -0.95
PRKCA-202ENST00000413366 PRG4Q92954 1404 aaPredicted RBP9.14□□□□□ -0.95
PRKCA-202ENST00000413366 PDCL2Q8N4E4 241 aa9.14□□□□□ -0.95
PRKCA-202ENST00000413366 FKBP5Q13451 457 aaPredicted RBP9.14□□□□□ -0.95
PRKCA-202ENST00000413366 DMRT2Q9Y5R5 561 aa9.14□□□□□ -0.95
PRKCA-202ENST00000413366 NEUROD6Q96NK8 337 aa9.14□□□□□ -0.95
PRKCA-202ENST00000413366 BRMS1Q9HCU9 246 aa9.14□□□□□ -0.95
PRKCA-202ENST00000413366 GRIN2BQ13224 1484 aa9.14□□□□□ -0.95
PRKCA-202ENST00000413366 DDX54Q8TDD1 881 aaKnown RBP9.14□□□□□ -0.95
PRKCA-202ENST00000413366 ANO2Q9NQ90 1003 aa9.14□□□□□ -0.95
PRKCA-202ENST00000413366 USP8P40818 1118 aa9.14□□□□□ -0.95
PRKCA-202ENST00000413366 STK11IPQ8N1F8 1099 aa9.13□□□□□ -0.95
PRKCA-202ENST00000413366 RAD54L2Q9Y4B4 1467 aa9.13□□□□□ -0.95
PRKCA-202ENST00000413366 MTMR7Q9Y216 660 aa9.13□□□□□ -0.95
PRKCA-202ENST00000413366 GOLGA6L19H0YKK7 550 aa9.13□□□□□ -0.95
PRKCA-202ENST00000413366 SPG7Q9UQ90 795 aa9.13□□□□□ -0.95
PRKCA-202ENST00000413366 DCTN1Q14203 1278 aa9.13□□□□□ -0.95
PRKCA-202ENST00000413366 HOOK1Q9UJC3 728 aaKnown RBP9.13□□□□□ -0.95
PRKCA-202ENST00000413366 PAF1Q8N7H5 531 aa9.13□□□□□ -0.95
PRKCA-202ENST00000413366 TBC1D2BQ9UPU7 963 aa9.13□□□□□ -0.95
PRKCA-202ENST00000413366 NFKBIBQ15653 356 aa9.13□□□□□ -0.95
PRKCA-202ENST00000413366 ODF2Q5BJF6 829 aa9.13□□□□□ -0.95
PRKCA-202ENST00000413366 DNAJC2Q99543 621 aaKnown RBP9.13□□□□□ -0.95
PRKCA-202ENST00000413366 RUFY1Q96T51 708 aa9.12□□□□□ -0.95
PRKCA-202ENST00000413366 WASHC4Q2M389 1173 aa9.12□□□□□ -0.95
PRKCA-202ENST00000413366 CC2D2AQ9P2K1 1620 aa9.12□□□□□ -0.95
PRKCA-202ENST00000413366 ANKRD45Q5TZF3 282 aa9.12□□□□□ -0.95
PRKCA-202ENST00000413366 NLRP13Q86W25 1043 aa9.12□□□□□ -0.95
PRKCA-202ENST00000413366 L3MBTL2Q969R5 705 aa9.12□□□□□ -0.95
PRKCA-202ENST00000413366 RRBP1Q9P2E9 1410 aaKnown RBP9.12□□□□□ -0.95
PRKCA-202ENST00000413366 RIPK4P57078 832 aa9.12□□□□□ -0.95
PRKCA-202ENST00000413366 SSR1P43307 286 aaKnown RBP9.11□□□□□ -0.95
PRKCA-202ENST00000413366 RNF20Q5VTR2 975 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 ANKRD20A12PQ8NF67 263 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 IFT140Q96RY7 1462 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 FYCO1Q9BQS8 1478 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 H0YHG0 523 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 HSP90B2PQ58FF3 399 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 C16orf71Q8IYS4 520 aaPredicted RBP9.11□□□□□ -0.95
PRKCA-202ENST00000413366 ZBED9Q6R2W3 1325 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 ZKSCAN1P17029 563 aaPredicted RBP9.11□□□□□ -0.95
PRKCA-202ENST00000413366 HSP90AB4PQ58FF6 505 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 ZNF592Q92610 1267 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 CNNM1Q9NRU3 951 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 MPHOSPH10O00566 681 aaKnown RBP9.11□□□□□ -0.95
PRKCA-202ENST00000413366 KIF20AO95235 890 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 LETM1O95202 739 aaPredicted RBP9.11□□□□□ -0.95
PRKCA-202ENST00000413366 PDE4AP27815 886 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 CT47A1Q5JQC4 288 aaPredicted RBP9.11□□□□□ -0.95
PRKCA-202ENST00000413366 DEF6Q9H4E7 631 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 MYOM3Q5VTT5 1437 aa9.11□□□□□ -0.95
PRKCA-202ENST00000413366 MYBBP1AQ9BQG0 1328 aaKnown RBP9.1□□□□□ -0.95
PRKCA-202ENST00000413366 ATP2B2Q01814 1243 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 CALCOCO1Q9P1Z2 691 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 ATP6V1DQ9Y5K8 247 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 KAT6BQ8WYB5 2073 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 EPS15P42566 896 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 TTLL12Q14166 644 aaPredicted RBP9.1□□□□□ -0.95
PRKCA-202ENST00000413366 SAFBQ15424 915 aaKnown RBP eCLIP9.1□□□□□ -0.95
PRKCA-202ENST00000413366 ESPNB1AK53 854 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 ERC2O15083 957 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 CTR9Q6PD62 1173 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 CABP2Q9NPB3 220 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 XBP1P17861 261 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 HMOX1P09601 288 aa9.1□□□□□ -0.95
PRKCA-202ENST00000413366 ZKSCAN2Q63HK3 967 aa9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms