RNA–Protein interactions for RNA: ENST00000413305.5

SSUH2-203, Transcript of ssu-2 homolog (C. elegans), humanhuman

TSL 1 (best)

Gene SSUH2, Length 1,874 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSUH2-203ENST00000413305 NLRP13Q86W25 1043 aa17.67■□□□□ 0.42
SSUH2-203ENST00000413305 PPP6R1Q9UPN7 881 aa17.67■□□□□ 0.42
SSUH2-203ENST00000413305 ERVK-7P63135 1459 aa17.67■□□□□ 0.42
SSUH2-203ENST00000413305 TMC1Q8TDI8 760 aa17.67■□□□□ 0.42
SSUH2-203ENST00000413305 NAP1L5Q96NT1 182 aaPredicted RBP17.67■□□□□ 0.42
SSUH2-203ENST00000413305 TMEM131LA2VDJ0 1609 aa17.66■□□□□ 0.42
SSUH2-203ENST00000413305 SLC52A1Q9NWF4 448 aa17.66■□□□□ 0.42
SSUH2-203ENST00000413305 NPC1L1Q9UHC9 1359 aa17.66■□□□□ 0.42
SSUH2-203ENST00000413305 C14orf93Q9H972 538 aaKnown RBP17.65■□□□□ 0.42
SSUH2-203ENST00000413305 PANK3Q9H999 370 aa17.65■□□□□ 0.42
SSUH2-203ENST00000413305 CENPJQ9HC77 1338 aaPredicted RBP17.65■□□□□ 0.42
SSUH2-203ENST00000413305 PLEKHG5O94827 1062 aa17.65■□□□□ 0.42
SSUH2-203ENST00000413305 QRICH2Q9H0J4 1663 aa17.64■□□□□ 0.41
SSUH2-203ENST00000413305 CLCN1P35523 988 aa17.63■□□□□ 0.41
SSUH2-203ENST00000413305 ASXL1Q8IXJ9 1541 aa17.63■□□□□ 0.41
SSUH2-203ENST00000413305 RRP1P56182 461 aaKnown RBP17.63■□□□□ 0.41
SSUH2-203ENST00000413305 MYO5BQ9ULV0 1848 aa17.63■□□□□ 0.41
SSUH2-203ENST00000413305 ARHGEF28Q8N1W1 1705 aaKnown RBP17.61■□□□□ 0.41
SSUH2-203ENST00000413305 CHGAP10645 457 aaKnown RBP17.61■□□□□ 0.41
SSUH2-203ENST00000413305 SPATA31D1Q6ZQQ2 1576 aa17.6■□□□□ 0.41
SSUH2-203ENST00000413305 VGFO15240 615 aaPredicted RBP17.6■□□□□ 0.41
SSUH2-203ENST00000413305 RRAGDQ9NQL2 400 aaPredicted RBP17.6■□□□□ 0.41
SSUH2-203ENST00000413305 CLTCQ00610 1675 aaKnown RBP17.59■□□□□ 0.41
SSUH2-203ENST00000413305 IDI1Q13907 227 aa17.57■□□□□ 0.4
SSUH2-203ENST00000413305 CNGB1Q14028 1251 aaPredicted RBP17.56■□□□□ 0.4
SSUH2-203ENST00000413305 AMER1Q5JTC6 1135 aaPredicted RBP17.56■□□□□ 0.4
SSUH2-203ENST00000413305 TPM2P07951 284 aa17.56■□□□□ 0.4
SSUH2-203ENST00000413305 CALD1Q05682 793 aaKnown RBP17.56■□□□□ 0.4
SSUH2-203ENST00000413305 KNSTRNQ9Y448 316 aa17.56■□□□□ 0.4
SSUH2-203ENST00000413305 BLMP54132 1417 aaPredicted RBP17.55■□□□□ 0.4
SSUH2-203ENST00000413305 USP32Q8NFA0 1604 aa17.54■□□□□ 0.4
SSUH2-203ENST00000413305 FRAT2O75474 233 aaPredicted RBP17.54■□□□□ 0.4
SSUH2-203ENST00000413305 CC2D1BQ5T0F9 858 aaKnown RBP17.54■□□□□ 0.4
SSUH2-203ENST00000413305 PUS7Q96PZ0 661 aaKnown RBP17.54■□□□□ 0.4
SSUH2-203ENST00000413305 PDCL3Q9H2J4 239 aa17.54■□□□□ 0.4
SSUH2-203ENST00000413305 PDE3BQ13370 1112 aa17.53■□□□□ 0.4
SSUH2-203ENST00000413305 EXOC6Q8TAG9 804 aa17.52■□□□□ 0.39
SSUH2-203ENST00000413305 RCAN3Q9UKA8 241 aa17.5■□□□□ 0.39
SSUH2-203ENST00000413305 FAM161AQ3B820 660 aa17.49■□□□□ 0.39
SSUH2-203ENST00000413305 TULP4Q9NRJ4 1543 aa17.49■□□□□ 0.39
SSUH2-203ENST00000413305 TRAK1Q9UPV9 953 aa17.48■□□□□ 0.39
SSUH2-203ENST00000413305 A2ML1A8K2U0 1454 aa17.48■□□□□ 0.39
SSUH2-203ENST00000413305 PPP2R1AP30153 589 aa17.47■□□□□ 0.39
SSUH2-203ENST00000413305 ALKQ9UM73 1620 aa17.46■□□□□ 0.39
SSUH2-203ENST00000413305 SETD1AO15047 1707 aaKnown RBP17.46■□□□□ 0.39
SSUH2-203ENST00000413305 PTPRMP28827 1452 aa17.46■□□□□ 0.39
SSUH2-203ENST00000413305 GOLGA6L3A6NEY3 463 aa17.45■□□□□ 0.38
SSUH2-203ENST00000413305 FBXO31Q5XUX0 539 aaPredicted RBP17.45■□□□□ 0.38
SSUH2-203ENST00000413305 TMEM132EQ6IEE7 984 aa17.45■□□□□ 0.38
SSUH2-203ENST00000413305 ISY1Q9ULR0 285 aaKnown RBP17.45■□□□□ 0.38
SSUH2-203ENST00000413305 BECN1Q14457 450 aa17.44■□□□□ 0.38
SSUH2-203ENST00000413305 MAP7D2Q96T17 732 aa17.44■□□□□ 0.38
SSUH2-203ENST00000413305 RBM10P98175 930 aaKnown RBP17.44■□□□□ 0.38
SSUH2-203ENST00000413305 NINLQ9Y2I6 1382 aa17.43■□□□□ 0.38
SSUH2-203ENST00000413305 DLC1Q96QB1 1528 aa17.43■□□□□ 0.38
SSUH2-203ENST00000413305 AAMPQ13685 434 aa17.43■□□□□ 0.38
SSUH2-203ENST00000413305 EVC2Q86UK5 1308 aa17.43■□□□□ 0.38
SSUH2-203ENST00000413305 CARD14Q9BXL6 1004 aa17.42■□□□□ 0.38
SSUH2-203ENST00000413305 YTHDC2Q9H6S0 1430 aaKnown RBP17.42■□□□□ 0.38
SSUH2-203ENST00000413305 CENPQQ7L2Z9 268 aaPredicted RBP17.41■□□□□ 0.38
SSUH2-203ENST00000413305 FGD1P98174 961 aa17.4■□□□□ 0.38
SSUH2-203ENST00000413305 NSD3Q9BZ95 1437 aa17.39■□□□□ 0.38
SSUH2-203ENST00000413305 ANKRD36BQ8N2N9 1353 aa17.39■□□□□ 0.37
SSUH2-203ENST00000413305 RIMS2Q9UQ26 1411 aa17.39■□□□□ 0.37
SSUH2-203ENST00000413305 SLC4A3P48751 1232 aa17.39■□□□□ 0.37
SSUH2-203ENST00000413305 NUTM2DQ5VT03 806 aaPredicted RBP17.39■□□□□ 0.37
SSUH2-203ENST00000413305 NSD2O96028 1365 aa17.38■□□□□ 0.37
SSUH2-203ENST00000413305 ZMYM3Q14202 1370 aa17.38■□□□□ 0.37
SSUH2-203ENST00000413305 NRXN3Q9Y4C0 1643 aa17.38■□□□□ 0.37
SSUH2-203ENST00000413305 POGKQ9P215 609 aa17.37■□□□□ 0.37
SSUH2-203ENST00000413305 FSD2A1L4K1 749 aa17.37■□□□□ 0.37
SSUH2-203ENST00000413305 MRE11P49959 708 aa17.37■□□□□ 0.37
SSUH2-203ENST00000413305 NCLP19338 710 aaKnown RBP17.36■□□□□ 0.37
SSUH2-203ENST00000413305 KNDC1Q76NI1 1749 aa17.36■□□□□ 0.37
SSUH2-203ENST00000413305 POLR3AO14802 1390 aaPredicted RBP17.36■□□□□ 0.37
SSUH2-203ENST00000413305 ATAD2Q6PL18 1390 aa17.35■□□□□ 0.37
SSUH2-203ENST00000413305 WDR43Q15061 677 aaKnown RBP eCLIP17.35■□□□□ 0.37
SSUH2-203ENST00000413305 STAG3Q9UJ98 1225 aa17.35■□□□□ 0.37
SSUH2-203ENST00000413305 UBR1Q8IWV7 1749 aa17.35■□□□□ 0.37
SSUH2-203ENST00000413305 TERF1P54274 439 aa17.34■□□□□ 0.37
SSUH2-203ENST00000413305 ADAMTS8Q9UP79 889 aa17.34■□□□□ 0.37
SSUH2-203ENST00000413305 ANKRD26Q9UPS8 1709 aa17.34■□□□□ 0.37
SSUH2-203ENST00000413305 SHPRHQ149N8 1683 aa17.33■□□□□ 0.37
SSUH2-203ENST00000413305 SLC12A5Q9H2X9 1139 aa17.33■□□□□ 0.37
SSUH2-203ENST00000413305 ESPNB1AK53 854 aa17.33■□□□□ 0.36
SSUH2-203ENST00000413305 XRCC6P12956 609 aaKnown RBP eCLIP17.33■□□□□ 0.36
SSUH2-203ENST00000413305 C8orf34Q49A92 452 aa17.33■□□□□ 0.36
SSUH2-203ENST00000413305 MTERF4Q7Z6M4 381 aaKnown RBP17.33■□□□□ 0.36
SSUH2-203ENST00000413305 PRDM4Q9UKN5 801 aa17.33■□□□□ 0.36
SSUH2-203ENST00000413305 TNRQ92752 1358 aa17.32■□□□□ 0.36
SSUH2-203ENST00000413305 CGNL1Q0VF96 1302 aa17.32■□□□□ 0.36
SSUH2-203ENST00000413305 KDM2BQ8NHM5 1336 aa17.32■□□□□ 0.36
SSUH2-203ENST00000413305 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.32■□□□□ 0.36
SSUH2-203ENST00000413305 ESF1Q9H501 851 aaKnown RBP17.32■□□□□ 0.36
SSUH2-203ENST00000413305 MLECQ14165 292 aa17.31■□□□□ 0.36
SSUH2-203ENST00000413305 ABCC11Q96J66 1382 aa17.31■□□□□ 0.36
SSUH2-203ENST00000413305 MED14O60244 1454 aa17.3■□□□□ 0.36
SSUH2-203ENST00000413305 ZNF521Q96K83 1311 aa17.3■□□□□ 0.36
SSUH2-203ENST00000413305 PDE4CQ08493 712 aa17.3■□□□□ 0.36
SSUH2-203ENST00000413305 TRIM44Q96DX7 344 aaPredicted RBP17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms