RNA–Protein interactions for RNA: ENST00000412678.6

CDHR4-202, Transcript of cadherin related family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDHR4, Length 2,476 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDHR4-202ENST00000412678 PDE3AQ14432 1141 aa14.29□□□□□ -0.12
CDHR4-202ENST00000412678 TNPO1Q92973 898 aaKnown RBP14.29□□□□□ -0.12
CDHR4-202ENST00000412678 ARID3AQ99856 593 aa14.29□□□□□ -0.12
CDHR4-202ENST00000412678 ADGBQ8N7X0 1667 aa14.29□□□□□ -0.12
CDHR4-202ENST00000412678 PLEKHD1A6NEE1 506 aa14.29□□□□□ -0.12
CDHR4-202ENST00000412678 C22orf23Q9BZE7 217 aa14.29□□□□□ -0.12
CDHR4-202ENST00000412678 PDZRN3Q9UPQ7 1066 aa14.29□□□□□ -0.12
CDHR4-202ENST00000412678 ANKRD30AQ9BXX3 1397 aa14.28□□□□□ -0.12
CDHR4-202ENST00000412678 MFAP1P55081 439 aaKnown RBP14.28□□□□□ -0.12
CDHR4-202ENST00000412678 XPCQ01831 940 aaPredicted RBP14.28□□□□□ -0.12
CDHR4-202ENST00000412678 ZKSCAN5Q9Y2L8 839 aa14.27□□□□□ -0.12
CDHR4-202ENST00000412678 PCDHB15Q9Y5E8 787 aa14.27□□□□□ -0.12
CDHR4-202ENST00000412678 ATP10BO94823 1461 aa14.27□□□□□ -0.12
CDHR4-202ENST00000412678 RSPH4AQ5TD94 716 aa14.27□□□□□ -0.13
CDHR4-202ENST00000412678 PMFBP1Q8TBY8 1022 aa14.27□□□□□ -0.13
CDHR4-202ENST00000412678 KNSTRNQ9Y448 316 aa14.27□□□□□ -0.13
CDHR4-202ENST00000412678 PRAG1Q86YV5 1406 aa14.27□□□□□ -0.13
CDHR4-202ENST00000412678 TMF1P82094 1093 aa14.26□□□□□ -0.13
CDHR4-202ENST00000412678 RAB3GAP1Q15042 981 aa14.26□□□□□ -0.13
CDHR4-202ENST00000412678 PDLIM2Q96JY6 352 aa14.26□□□□□ -0.13
CDHR4-202ENST00000412678 EIF2AK3Q9NZJ5 1116 aaKnown RBP14.26□□□□□ -0.13
CDHR4-202ENST00000412678 TRPM1Q7Z4N2 1603 aa14.26□□□□□ -0.13
CDHR4-202ENST00000412678 UHRF1BP1LA0JNW5 1464 aa14.26□□□□□ -0.13
CDHR4-202ENST00000412678 RTEL1-TNFRSF6BF6WH68 1400 aa14.26□□□□□ -0.13
CDHR4-202ENST00000412678 ERBINQ96RT1 1412 aa14.26□□□□□ -0.13
CDHR4-202ENST00000412678 SMC5Q8IY18 1101 aa14.26□□□□□ -0.13
CDHR4-202ENST00000412678 E9PSI1 815 aa14.25□□□□□ -0.13
CDHR4-202ENST00000412678 GOLGA6L22H0YM25 854 aa14.25□□□□□ -0.13
CDHR4-202ENST00000412678 NPM1P06748 294 aaKnown RBP eCLIP14.24□□□□□ -0.13
CDHR4-202ENST00000412678 SNX21Q969T3 373 aa14.24□□□□□ -0.13
CDHR4-202ENST00000412678 TNNQ9UQP3 1299 aa14.24□□□□□ -0.13
CDHR4-202ENST00000412678 KDM5DQ9BY66 1539 aa14.24□□□□□ -0.13
CDHR4-202ENST00000412678 RBM25P49756 843 aaKnown RBP14.24□□□□□ -0.13
CDHR4-202ENST00000412678 ZNF445P59923 1031 aa14.24□□□□□ -0.13
CDHR4-202ENST00000412678 KLHL40Q2TBA0 621 aa14.24□□□□□ -0.13
CDHR4-202ENST00000412678 MYRIPQ8NFW9 859 aa14.24□□□□□ -0.13
CDHR4-202ENST00000412678 ADGRL2O95490 1459 aa14.23□□□□□ -0.13
CDHR4-202ENST00000412678 TROQ12816 1431 aaPredicted RBP14.23□□□□□ -0.13
CDHR4-202ENST00000412678 CYB5RLQ6IPT4 315 aa14.22□□□□□ -0.13
CDHR4-202ENST00000412678 CCDC39Q9UFE4 941 aa14.22□□□□□ -0.13
CDHR4-202ENST00000412678 MAGI2Q86UL8 1455 aa14.22□□□□□ -0.13
CDHR4-202ENST00000412678 RLBP1P12271 317 aa14.22□□□□□ -0.13
CDHR4-202ENST00000412678 CBX1P83916 185 aa14.21□□□□□ -0.13
CDHR4-202ENST00000412678 AMER1Q5JTC6 1135 aaPredicted RBP14.21□□□□□ -0.13
CDHR4-202ENST00000412678 CLEC17AQ6ZS10 378 aa14.21□□□□□ -0.13
CDHR4-202ENST00000412678 PRIMPOLQ96LW4 560 aa14.21□□□□□ -0.13
CDHR4-202ENST00000412678 HMGN5P82970 282 aaKnown RBP14.21□□□□□ -0.13
CDHR4-202ENST00000412678 VGFO15240 615 aaPredicted RBP14.2□□□□□ -0.14
CDHR4-202ENST00000412678 ZNF830Q96NB3 372 aaPredicted RBP14.2□□□□□ -0.14
CDHR4-202ENST00000412678 BCL2L13Q9BXK5 485 aa14.2□□□□□ -0.14
CDHR4-202ENST00000412678 HSP90AB1P08238 724 aaKnown RBP14.2□□□□□ -0.14
CDHR4-202ENST00000412678 CDK11BP21127 795 aaKnown RBP14.2□□□□□ -0.14
CDHR4-202ENST00000412678 GTF2F1P35269 517 aaKnown RBP eCLIP14.2□□□□□ -0.14
CDHR4-202ENST00000412678 FTSJ3Q8IY81 847 aaKnown RBP14.2□□□□□ -0.14
CDHR4-202ENST00000412678 ARHGAP31Q2M1Z3 1444 aa14.2□□□□□ -0.14
CDHR4-202ENST00000412678 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
CDHR4-202ENST00000412678 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
CDHR4-202ENST00000412678 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
CDHR4-202ENST00000412678 CROCC2H7BZ55 1655 aa14.2□□□□□ -0.14
CDHR4-202ENST00000412678 ADCY10Q96PN6 1610 aa14.19□□□□□ -0.14
CDHR4-202ENST00000412678 GPATCH8Q9UKJ3 1502 aaKnown RBP14.19□□□□□ -0.14
CDHR4-202ENST00000412678 GPRASP1Q5JY77 1395 aa14.18□□□□□ -0.14
CDHR4-202ENST00000412678 RWDD1Q9H446 243 aaPredicted RBP14.18□□□□□ -0.14
CDHR4-202ENST00000412678 FOXD4L1Q9NU39 408 aa14.18□□□□□ -0.14
CDHR4-202ENST00000412678 DDX49Q9Y6V7 483 aaKnown RBP14.18□□□□□ -0.14
CDHR4-202ENST00000412678 NEUROD2Q15784 382 aa14.18□□□□□ -0.14
CDHR4-202ENST00000412678 PRDM15P57071 1507 aaPredicted RBP14.17□□□□□ -0.14
CDHR4-202ENST00000412678 ZCCHC11Q5TAX3 1644 aaKnown RBP14.17□□□□□ -0.14
CDHR4-202ENST00000412678 PAXIP1Q6ZW49 1069 aaPredicted RBP14.16□□□□□ -0.14
CDHR4-202ENST00000412678 ZNF710Q8N1W2 664 aa14.16□□□□□ -0.14
CDHR4-202ENST00000412678 WDR7Q9Y4E6 1490 aa14.16□□□□□ -0.14
CDHR4-202ENST00000412678 RARSP54136 660 aaKnown RBP14.16□□□□□ -0.14
CDHR4-202ENST00000412678 KIAA2012Q0VF49 1180 aa14.16□□□□□ -0.14
CDHR4-202ENST00000412678 DNTTIP2Q5QJE6 756 aaKnown RBP14.16□□□□□ -0.14
CDHR4-202ENST00000412678 ATP2B3Q16720 1220 aa14.15□□□□□ -0.14
CDHR4-202ENST00000412678 WWC1Q8IX03 1113 aa14.15□□□□□ -0.14
CDHR4-202ENST00000412678 VGLL3A8MV65 326 aa14.15□□□□□ -0.14
CDHR4-202ENST00000412678 SLC20A2Q08357 652 aa14.15□□□□□ -0.14
CDHR4-202ENST00000412678 A2MP01023 1474 aa14.14□□□□□ -0.15
CDHR4-202ENST00000412678 C9orf84Q5VXU9 1444 aa14.14□□□□□ -0.15
CDHR4-202ENST00000412678 NGEFQ8N5V2 710 aa14.14□□□□□ -0.15
CDHR4-202ENST00000412678 PLXNC1O60486 1568 aa14.14□□□□□ -0.15
CDHR4-202ENST00000412678 ITSN2Q9NZM3 1697 aa14.14□□□□□ -0.15
CDHR4-202ENST00000412678 TSPY4P0CV99 314 aa14.14□□□□□ -0.15
CDHR4-202ENST00000412678 TSPY10P0CW01 314 aa14.14□□□□□ -0.15
CDHR4-202ENST00000412678 RBSNQ9H1K0 784 aa14.14□□□□□ -0.15
CDHR4-202ENST00000412678 RRP7AQ9Y3A4 280 aaKnown RBP14.14□□□□□ -0.15
CDHR4-202ENST00000412678 ZSCAN23Q3MJ62 389 aa14.13□□□□□ -0.15
CDHR4-202ENST00000412678 CGNQ9P2M7 1197 aaKnown RBP14.13□□□□□ -0.15
CDHR4-202ENST00000412678 PIK3C2GO75747 1445 aa14.13□□□□□ -0.15
CDHR4-202ENST00000412678 KIF3AQ9Y496 699 aa14.12□□□□□ -0.15
CDHR4-202ENST00000412678 BAG4O95429 457 aaKnown RBP14.11□□□□□ -0.15
CDHR4-202ENST00000412678 PLCD3Q8N3E9 789 aa14.11□□□□□ -0.15
CDHR4-202ENST00000412678 FEZ1Q99689 392 aa14.1□□□□□ -0.15
CDHR4-202ENST00000412678 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.1□□□□□ -0.15
CDHR4-202ENST00000412678 ZNF771Q7L3S4 317 aaPredicted RBP14.1□□□□□ -0.15
CDHR4-202ENST00000412678 PDCL2Q8N4E4 241 aa14.1□□□□□ -0.15
CDHR4-202ENST00000412678 DNAJC2Q99543 621 aaKnown RBP14.1□□□□□ -0.15
CDHR4-202ENST00000412678 ASXL1Q8IXJ9 1541 aa14.1□□□□□ -0.15
CDHR4-202ENST00000412678 FAM135AQ9P2D6 1515 aa14.1□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 13 ms