RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 METP08581 1390 aa14.58□□□□□ -0.08
SOX9-AS1-201ENST00000412640 RPRD2Q5VT52 1461 aaKnown RBP14.57□□□□□ -0.08
SOX9-AS1-201ENST00000412640 CROCC2H7BZ55 1655 aa14.56□□□□□ -0.08
SOX9-AS1-201ENST00000412640 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.56□□□□□ -0.08
SOX9-AS1-201ENST00000412640 XPCQ01831 940 aaPredicted RBP14.56□□□□□ -0.08
SOX9-AS1-201ENST00000412640 CCDC9Q9Y3X0 531 aaKnown RBP14.55□□□□□ -0.08
SOX9-AS1-201ENST00000412640 SLIT2O94813 1529 aa14.55□□□□□ -0.08
SOX9-AS1-201ENST00000412640 DCAF8L1A6NGE4 600 aa14.54□□□□□ -0.08
SOX9-AS1-201ENST00000412640 NRXN3Q9Y4C0 1643 aa14.54□□□□□ -0.08
SOX9-AS1-201ENST00000412640 A0A0G2JS52 829 aa14.53□□□□□ -0.08
SOX9-AS1-201ENST00000412640 ONECUT3O60422 494 aaPredicted RBP14.53□□□□□ -0.08
SOX9-AS1-201ENST00000412640 MYT1Q01538 1121 aa14.53□□□□□ -0.08
SOX9-AS1-201ENST00000412640 KANK4Q5T7N3 995 aaPredicted RBP14.53□□□□□ -0.08
SOX9-AS1-201ENST00000412640 ZNF784Q8NCA9 323 aaPredicted RBP14.53□□□□□ -0.08
SOX9-AS1-201ENST00000412640 DAPK1P53355 1430 aa14.52□□□□□ -0.08
SOX9-AS1-201ENST00000412640 ANKRD30AQ9BXX3 1397 aa14.52□□□□□ -0.08
SOX9-AS1-201ENST00000412640 EZH2Q15910 746 aaKnown RBP14.52□□□□□ -0.09
SOX9-AS1-201ENST00000412640 FAM182BQ5T319 152 aa14.52□□□□□ -0.09
SOX9-AS1-201ENST00000412640 NPHP3Q7Z494 1330 aa14.51□□□□□ -0.09
SOX9-AS1-201ENST00000412640 VPS72Q15906 364 aa14.51□□□□□ -0.09
SOX9-AS1-201ENST00000412640 FOXO3O43524 673 aa14.5□□□□□ -0.09
SOX9-AS1-201ENST00000412640 ESCO1Q5FWF5 840 aa14.5□□□□□ -0.09
SOX9-AS1-201ENST00000412640 PCGF6Q9BYE7 350 aa14.5□□□□□ -0.09
SOX9-AS1-201ENST00000412640 C1QTNF8P60827 252 aa14.49□□□□□ -0.09
SOX9-AS1-201ENST00000412640 PPP1R1BQ9UD71 204 aaPredicted RBP14.49□□□□□ -0.09
SOX9-AS1-201ENST00000412640 PXDNQ92626 1479 aa14.49□□□□□ -0.09
SOX9-AS1-201ENST00000412640 PLEKHG5O94827 1062 aa14.47□□□□□ -0.09
SOX9-AS1-201ENST00000412640 FAM98CQ17RN3 349 aaKnown RBP14.46□□□□□ -0.09
SOX9-AS1-201ENST00000412640 PTPN23Q9H3S7 1636 aa14.45□□□□□ -0.1
SOX9-AS1-201ENST00000412640 RGPD1P0DJD0 1748 aa14.45□□□□□ -0.1
SOX9-AS1-201ENST00000412640 ZNF326Q5BKZ1 582 aaKnown RBP14.45□□□□□ -0.1
SOX9-AS1-201ENST00000412640 CAMTA1Q9Y6Y1 1673 aa14.45□□□□□ -0.1
SOX9-AS1-201ENST00000412640 HAP1P54257 671 aaPredicted RBP14.44□□□□□ -0.1
SOX9-AS1-201ENST00000412640 CAMKK2Q96RR4 588 aa14.44□□□□□ -0.1
SOX9-AS1-201ENST00000412640 ROBO2Q9HCK4 1378 aa14.44□□□□□ -0.1
SOX9-AS1-201ENST00000412640 E9PCH4 1651 aa14.43□□□□□ -0.1
SOX9-AS1-201ENST00000412640 CABLES1Q8TDN4 633 aa14.43□□□□□ -0.1
SOX9-AS1-201ENST00000412640 USP32Q8NFA0 1604 aa14.43□□□□□ -0.1
SOX9-AS1-201ENST00000412640 ADGRL2O95490 1459 aa14.43□□□□□ -0.1
SOX9-AS1-201ENST00000412640 DISP2A7MBM2 1401 aa14.42□□□□□ -0.1
SOX9-AS1-201ENST00000412640 NUTM2FA1L443 756 aa14.42□□□□□ -0.1
SOX9-AS1-201ENST00000412640 SPON1Q9HCB6 807 aa14.42□□□□□ -0.1
SOX9-AS1-201ENST00000412640 APLP2Q06481 763 aa14.41□□□□□ -0.1
SOX9-AS1-201ENST00000412640 NINLQ9Y2I6 1382 aa14.41□□□□□ -0.1
SOX9-AS1-201ENST00000412640 TNS1Q9HBL0 1735 aaKnown RBP14.41□□□□□ -0.1
SOX9-AS1-201ENST00000412640 ANKRD50Q9ULJ7 1429 aa14.41□□□□□ -0.1
SOX9-AS1-201ENST00000412640 SPATA31A3Q5VYP0 1347 aa14.41□□□□□ -0.1
SOX9-AS1-201ENST00000412640 KCNQ2O43526 872 aa14.4□□□□□ -0.1
SOX9-AS1-201ENST00000412640 TRIM37O94972 964 aa14.4□□□□□ -0.1
SOX9-AS1-201ENST00000412640 PLCH1Q4KWH8 1693 aa14.39□□□□□ -0.11
SOX9-AS1-201ENST00000412640 PPARGC1BQ86YN6 1023 aaKnown RBP14.39□□□□□ -0.11
SOX9-AS1-201ENST00000412640 LRPPRCP42704 1394 aaKnown RBP14.38□□□□□ -0.11
SOX9-AS1-201ENST00000412640 APBA3O96018 575 aa14.38□□□□□ -0.11
SOX9-AS1-201ENST00000412640 IQGAP3Q86VI3 1631 aa14.37□□□□□ -0.11
SOX9-AS1-201ENST00000412640 FAM83GA6ND36 823 aa14.37□□□□□ -0.11
SOX9-AS1-201ENST00000412640 NWD2Q9ULI1 1742 aa14.37□□□□□ -0.11
SOX9-AS1-201ENST00000412640 NBPF8Q3BBV2 869 aa14.36□□□□□ -0.11
SOX9-AS1-201ENST00000412640 NBPF14Q5TI25 921 aa14.36□□□□□ -0.11
SOX9-AS1-201ENST00000412640 KRT28Q7Z3Y7 464 aa14.36□□□□□ -0.11
SOX9-AS1-201ENST00000412640 CEP350Q5VT06 3117 aa14.33□□□□□ -0.11
SOX9-AS1-201ENST00000412640 LMOD2Q6P5Q4 547 aa14.33□□□□□ -0.12
SOX9-AS1-201ENST00000412640 BTG4Q9NY30 223 aa14.33□□□□□ -0.12
SOX9-AS1-201ENST00000412640 ADGRB2O60241 1585 aa14.33□□□□□ -0.12
SOX9-AS1-201ENST00000412640 HFM1A2PYH4 1435 aa14.32□□□□□ -0.12
SOX9-AS1-201ENST00000412640 PARD3Q8TEW0 1356 aa14.32□□□□□ -0.12
SOX9-AS1-201ENST00000412640 CDC42BPGQ6DT37 1551 aa14.31□□□□□ -0.12
SOX9-AS1-201ENST00000412640 NUP188Q5SRE5 1749 aa14.31□□□□□ -0.12
SOX9-AS1-201ENST00000412640 NEXMIFQ5QGS0 1516 aa14.31□□□□□ -0.12
SOX9-AS1-201ENST00000412640 RREB1Q92766 1687 aa14.3□□□□□ -0.12
SOX9-AS1-201ENST00000412640 FAM196AQ6ZSG2 479 aa14.3□□□□□ -0.12
SOX9-AS1-201ENST00000412640 CCDC144AA2RUR9 1427 aa14.3□□□□□ -0.12
SOX9-AS1-201ENST00000412640 UTRNP46939 3433 aa14.29□□□□□ -0.12
SOX9-AS1-201ENST00000412640 SPATA31A5Q5VU36 1347 aa14.29□□□□□ -0.12
SOX9-AS1-201ENST00000412640 SPATA31A7Q8IWB4 1347 aa14.29□□□□□ -0.12
SOX9-AS1-201ENST00000412640 NAIPQ13075 1403 aa14.29□□□□□ -0.12
SOX9-AS1-201ENST00000412640 TNS3Q68CZ2 1445 aa14.29□□□□□ -0.12
SOX9-AS1-201ENST00000412640 NRAPQ86VF7 1730 aa14.29□□□□□ -0.12
SOX9-AS1-201ENST00000412640 GIGYF1O75420 1035 aaPredicted RBP14.28□□□□□ -0.12
SOX9-AS1-201ENST00000412640 NUP155O75694 1391 aa14.27□□□□□ -0.12
SOX9-AS1-201ENST00000412640 WAPLQ7Z5K2 1190 aa14.27□□□□□ -0.13
SOX9-AS1-201ENST00000412640 ABCA3Q99758 1704 aa14.27□□□□□ -0.13
SOX9-AS1-201ENST00000412640 THSD7AQ9UPZ6 1657 aa14.26□□□□□ -0.13
SOX9-AS1-201ENST00000412640 PRAG1Q86YV5 1406 aa14.26□□□□□ -0.13
SOX9-AS1-201ENST00000412640 PSME1Q06323 249 aa14.26□□□□□ -0.13
SOX9-AS1-201ENST00000412640 FAM50AQ14320 339 aaKnown RBP14.26□□□□□ -0.13
SOX9-AS1-201ENST00000412640 NRKQ7Z2Y5 1582 aa14.26□□□□□ -0.13
SOX9-AS1-201ENST00000412640 PDGFDQ9GZP0 370 aaPredicted RBP14.25□□□□□ -0.13
SOX9-AS1-201ENST00000412640 RRBP1Q9P2E9 1410 aaKnown RBP14.24□□□□□ -0.13
SOX9-AS1-201ENST00000412640 VGFO15240 615 aaPredicted RBP14.24□□□□□ -0.13
SOX9-AS1-201ENST00000412640 CHD4Q14839 1912 aa14.23□□□□□ -0.13
SOX9-AS1-201ENST00000412640 ZBTB7AO95365 584 aa14.23□□□□□ -0.13
SOX9-AS1-201ENST00000412640 SYT17Q9BSW7 474 aa14.23□□□□□ -0.13
SOX9-AS1-201ENST00000412640 STK26Q9P289 416 aa14.23□□□□□ -0.13
SOX9-AS1-201ENST00000412640 KIF1AQ12756 1690 aa14.23□□□□□ -0.13
SOX9-AS1-201ENST00000412640 FHDC1Q9C0D6 1143 aaPredicted RBP14.22□□□□□ -0.13
SOX9-AS1-201ENST00000412640 PHF8Q9UPP1 1060 aa14.22□□□□□ -0.13
SOX9-AS1-201ENST00000412640 ATF5Q9Y2D1 282 aaPredicted RBP14.22□□□□□ -0.13
SOX9-AS1-201ENST00000412640 MYOM1P52179 1685 aa14.21□□□□□ -0.13
SOX9-AS1-201ENST00000412640 PTGER2P43116 358 aa14.21□□□□□ -0.13
SOX9-AS1-201ENST00000412640 SBNO1A3KN83 1393 aa14.21□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms