RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 ANP32AP39687 249 aaKnown RBP15.02□□□□□ -0.01
TRAFD1-202ENST00000412615 C20orf194Q5TEA3 1177 aa15.02□□□□□ -0.01
TRAFD1-202ENST00000412615 NKTRP30414 1462 aaKnown RBP15.02□□□□□ -0.01
TRAFD1-202ENST00000412615 ARHGEF28Q8N1W1 1705 aaKnown RBP15.01□□□□□ -0.01
TRAFD1-202ENST00000412615 ANKRD36BQ8N2N9 1353 aa15.01□□□□□ -0.01
TRAFD1-202ENST00000412615 NSD2O96028 1365 aa15□□□□□ -0.01
TRAFD1-202ENST00000412615 PRKCSHP14314 528 aaPredicted RBP15□□□□□ -0.01
TRAFD1-202ENST00000412615 FAM69CQ0P6D2 419 aa15□□□□□ -0.01
TRAFD1-202ENST00000412615 TULP4Q9NRJ4 1543 aa15□□□□□ -0.01
TRAFD1-202ENST00000412615 TNNT2P45379 298 aaPredicted RBP15□□□□□ -0.01
TRAFD1-202ENST00000412615 CFAP53Q96M91 514 aa15□□□□□ -0.01
TRAFD1-202ENST00000412615 SPINK5Q9NQ38 1064 aaPredicted RBP15□□□□□ -0.01
TRAFD1-202ENST00000412615 PREX1Q8TCU6 1659 aa15□□□□□ -0.01
TRAFD1-202ENST00000412615 RUNDC1Q96C34 613 aa14.99□□□□□ -0.01
TRAFD1-202ENST00000412615 NINLQ9Y2I6 1382 aa14.99□□□□□ -0.01
TRAFD1-202ENST00000412615 CABP2Q9NPB3 220 aa14.99□□□□□ -0.01
TRAFD1-202ENST00000412615 TMEM131LA2VDJ0 1609 aa14.98□□□□□ -0.01
TRAFD1-202ENST00000412615 MTHFSP49914 203 aa14.98□□□□□ -0.01
TRAFD1-202ENST00000412615 STK26Q9P289 416 aa14.98□□□□□ -0.01
TRAFD1-202ENST00000412615 PPP6R1Q9UPN7 881 aa14.98□□□□□ -0.01
TRAFD1-202ENST00000412615 WWC1Q8IX03 1113 aa14.98□□□□□ -0.01
TRAFD1-202ENST00000412615 NOP58Q9Y2X3 529 aaKnown RBP14.98□□□□□ -0.01
TRAFD1-202ENST00000412615 PDE4AP27815 886 aa14.97□□□□□ -0.01
TRAFD1-202ENST00000412615 SAFB2Q14151 953 aaKnown RBP eCLIP14.97□□□□□ -0.01
TRAFD1-202ENST00000412615 FBXO31Q5XUX0 539 aaPredicted RBP14.96□□□□□ -0.01
TRAFD1-202ENST00000412615 IPO9Q96P70 1041 aaKnown RBP14.96□□□□□ -0.01
TRAFD1-202ENST00000412615 SRPK2P78362 688 aaKnown RBP14.96□□□□□ -0.02
TRAFD1-202ENST00000412615 CENPQQ7L2Z9 268 aaPredicted RBP14.96□□□□□ -0.02
TRAFD1-202ENST00000412615 SHPRHQ149N8 1683 aa14.95□□□□□ -0.02
TRAFD1-202ENST00000412615 KDM2BQ8NHM5 1336 aa14.95□□□□□ -0.02
TRAFD1-202ENST00000412615 BACH2Q9BYV9 841 aa14.95□□□□□ -0.02
TRAFD1-202ENST00000412615 STAG3Q9UJ98 1225 aa14.95□□□□□ -0.02
TRAFD1-202ENST00000412615 DMRT2Q9Y5R5 561 aa14.95□□□□□ -0.02
TRAFD1-202ENST00000412615 ATAD2Q6PL18 1390 aa14.94□□□□□ -0.02
TRAFD1-202ENST00000412615 POGKQ9P215 609 aa14.94□□□□□ -0.02
TRAFD1-202ENST00000412615 DIP2BQ9P265 1576 aa14.94□□□□□ -0.02
TRAFD1-202ENST00000412615 TCP11L2Q8N4U5 519 aa14.94□□□□□ -0.02
TRAFD1-202ENST00000412615 PTPRMP28827 1452 aa14.94□□□□□ -0.02
TRAFD1-202ENST00000412615 YTHDC2Q9H6S0 1430 aaKnown RBP14.93□□□□□ -0.02
TRAFD1-202ENST00000412615 NCBP3Q53F19 620 aaKnown RBP14.93□□□□□ -0.02
TRAFD1-202ENST00000412615 MYO5BQ9ULV0 1848 aa14.93□□□□□ -0.02
TRAFD1-202ENST00000412615 REREQ9P2R6 1566 aa14.93□□□□□ -0.02
TRAFD1-202ENST00000412615 BCAR3O75815 825 aa14.93□□□□□ -0.02
TRAFD1-202ENST00000412615 WDR63Q8IWG1 891 aa14.93□□□□□ -0.02
TRAFD1-202ENST00000412615 PRAM1Q96QH2 718 aa14.93□□□□□ -0.02
TRAFD1-202ENST00000412615 TERF2IPQ9NYB0 399 aa14.93□□□□□ -0.02
TRAFD1-202ENST00000412615 AGLP35573 1532 aa14.93□□□□□ -0.02
TRAFD1-202ENST00000412615 ABCC11Q96J66 1382 aa14.93□□□□□ -0.02
TRAFD1-202ENST00000412615 PHF23Q9BUL5 403 aaPredicted RBP14.92□□□□□ -0.02
TRAFD1-202ENST00000412615 A0A1W2PP64 1363 aa14.92□□□□□ -0.02
TRAFD1-202ENST00000412615 CCDC27Q2M243 656 aa14.92□□□□□ -0.02
TRAFD1-202ENST00000412615 RIMBP3CA6NJZ7 1639 aa14.91□□□□□ -0.02
TRAFD1-202ENST00000412615 RIMBP3BA6NNM3 1639 aa14.91□□□□□ -0.02
TRAFD1-202ENST00000412615 RIMBP3Q9UFD9 1639 aa14.91□□□□□ -0.02
TRAFD1-202ENST00000412615 NEUROD2Q15784 382 aa14.91□□□□□ -0.02
TRAFD1-202ENST00000412615 SENP3Q9H4L4 574 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-202ENST00000412615 ZBTB47Q9UFB7 747 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-202ENST00000412615 MINK1Q8N4C8 1332 aaPredicted RBP14.91□□□□□ -0.02
TRAFD1-202ENST00000412615 PDE3AQ14432 1141 aa14.91□□□□□ -0.02
TRAFD1-202ENST00000412615 IQSEC2Q5JU85 1478 aa14.91□□□□□ -0.02
TRAFD1-202ENST00000412615 RRP7AQ9Y3A4 280 aaKnown RBP14.9□□□□□ -0.02
TRAFD1-202ENST00000412615 ALKQ9UM73 1620 aa14.9□□□□□ -0.02
TRAFD1-202ENST00000412615 U2AF1L5P0DN76 240 aaPredicted RBP14.89□□□□□ -0.03
TRAFD1-202ENST00000412615 U2AF1Q01081 240 aaKnown RBP eCLIP14.89□□□□□ -0.03
TRAFD1-202ENST00000412615 PAK3O75914 559 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-202ENST00000412615 HDGFL2Q7Z4V5 671 aaPredicted RBP14.88□□□□□ -0.03
TRAFD1-202ENST00000412615 CANXP27824 592 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-202ENST00000412615 CDK19Q9BWU1 502 aa14.87□□□□□ -0.03
TRAFD1-202ENST00000412615 GGNBP2Q9H3C7 697 aa14.87□□□□□ -0.03
TRAFD1-202ENST00000412615 MED14O60244 1454 aa14.87□□□□□ -0.03
TRAFD1-202ENST00000412615 CLTCQ00610 1675 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-202ENST00000412615 FYB1O15117 783 aa14.87□□□□□ -0.03
TRAFD1-202ENST00000412615 NPM2Q86SE8 214 aaKnown RBP14.87□□□□□ -0.03
TRAFD1-202ENST00000412615 TSPOAP1O95153 1857 aa14.86□□□□□ -0.03
TRAFD1-202ENST00000412615 SKAP1Q86WV1 359 aa14.86□□□□□ -0.03
TRAFD1-202ENST00000412615 MYH16Q9H6N6 1097 aa14.86□□□□□ -0.03
TRAFD1-202ENST00000412615 A2ML1A8K2U0 1454 aa14.85□□□□□ -0.03
TRAFD1-202ENST00000412615 SPATA31D1Q6ZQQ2 1576 aa14.85□□□□□ -0.03
TRAFD1-202ENST00000412615 CD163L1Q9NR16 1453 aa14.84□□□□□ -0.03
TRAFD1-202ENST00000412615 ARHGEF40Q8TER5 1519 aa14.84□□□□□ -0.03
TRAFD1-202ENST00000412615 RARSP54136 660 aaKnown RBP14.84□□□□□ -0.03
TRAFD1-202ENST00000412615 RIMS2Q9UQ26 1411 aa14.84□□□□□ -0.03
TRAFD1-202ENST00000412615 DLC1Q96QB1 1528 aa14.84□□□□□ -0.03
TRAFD1-202ENST00000412615 U2SURPO15042 1029 aaKnown RBP14.83□□□□□ -0.04
TRAFD1-202ENST00000412615 AAMPQ13685 434 aa14.83□□□□□ -0.04
TRAFD1-202ENST00000412615 CABP1Q9NZU7 370 aa14.83□□□□□ -0.04
TRAFD1-202ENST00000412615 MLECQ14165 292 aa14.82□□□□□ -0.04
TRAFD1-202ENST00000412615 FRAT1Q92837 279 aaPredicted RBP14.82□□□□□ -0.04
TRAFD1-202ENST00000412615 ADGRB2O60241 1585 aa14.82□□□□□ -0.04
TRAFD1-202ENST00000412615 NLRP1Q9C000 1473 aa14.82□□□□□ -0.04
TRAFD1-202ENST00000412615 CLUAP1Q96AJ1 413 aa14.81□□□□□ -0.04
TRAFD1-202ENST00000412615 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.81□□□□□ -0.04
TRAFD1-202ENST00000412615 PANK1Q8TE04 598 aa14.81□□□□□ -0.04
TRAFD1-202ENST00000412615 PLEKHF1Q96S99 279 aa14.81□□□□□ -0.04
TRAFD1-202ENST00000412615 PNNQ9H307 717 aaKnown RBP14.81□□□□□ -0.04
TRAFD1-202ENST00000412615 COG6Q9Y2V7 657 aa14.81□□□□□ -0.04
TRAFD1-202ENST00000412615 FAM161AQ3B820 660 aa14.8□□□□□ -0.04
TRAFD1-202ENST00000412615 ESF1Q9H501 851 aaKnown RBP14.8□□□□□ -0.04
TRAFD1-202ENST00000412615 ANKRD26Q9UPS8 1709 aa14.8□□□□□ -0.04
TRAFD1-202ENST00000412615 COL3A1P02461 1466 aaPredicted RBP14.8□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms