RNA–Protein interactions for RNA: ENST00000412011.5

ITSN2-205, Transcript of intersectin 2, humanhuman

TSL 1 (best)

Gene ITSN2, Length 2,066 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITSN2-205ENST00000412011 BLMP54132 1417 aaPredicted RBP27.66■■■□□ 2.02
ITSN2-205ENST00000412011 MINK1Q8N4C8 1332 aaPredicted RBP27.63■■■□□ 2.01
ITSN2-205ENST00000412011 HDGFP51858 240 aaKnown RBP27.62■■■□□ 2.01
ITSN2-205ENST00000412011 ANKRD36BQ8N2N9 1353 aa27.62■■■□□ 2.01
ITSN2-205ENST00000412011 TMEM2Q9UHN6 1383 aa27.62■■■□□ 2.01
ITSN2-205ENST00000412011 NLRP1Q9C000 1473 aa27.61■■■□□ 2.01
ITSN2-205ENST00000412011 CEBPAP49715 358 aaPredicted RBP27.61■■■□□ 2.01
ITSN2-205ENST00000412011 BCANQ96GW7 911 aa27.61■■■□□ 2.01
ITSN2-205ENST00000412011 NUDCQ9Y266 331 aa27.61■■■□□ 2.01
ITSN2-205ENST00000412011 SRPK2P78362 688 aaKnown RBP27.6■■■□□ 2.01
ITSN2-205ENST00000412011 ABCC11Q96J66 1382 aa27.59■■■□□ 2.01
ITSN2-205ENST00000412011 NINLQ9Y2I6 1382 aa27.59■■■□□ 2.01
ITSN2-205ENST00000412011 METP08581 1390 aa27.58■■■□□ 2.01
ITSN2-205ENST00000412011 ADAMTS8Q9UP79 889 aa27.58■■■□□ 2.01
ITSN2-205ENST00000412011 ATAD2Q6PL18 1390 aa27.57■■■□□ 2
ITSN2-205ENST00000412011 KNDC1Q76NI1 1749 aa27.57■■■□□ 2
ITSN2-205ENST00000412011 WDR43Q15061 677 aaKnown RBP eCLIP27.55■■■□□ 2
ITSN2-205ENST00000412011 PLEKHH1Q9ULM0 1364 aa27.54■■■□□ 2
ITSN2-205ENST00000412011 WAPLQ7Z5K2 1190 aa27.54■■■□□ 2
ITSN2-205ENST00000412011 CGNL1Q0VF96 1302 aa27.54■■■□□ 2
ITSN2-205ENST00000412011 MORC1Q86VD1 984 aa27.52■■■□□ 2
ITSN2-205ENST00000412011 CDK19Q9BWU1 502 aa27.52■■■□□ 2
ITSN2-205ENST00000412011 IRX6P78412 446 aaPredicted RBP27.52■■■□□ 2
ITSN2-205ENST00000412011 SALL2Q9Y467 1007 aaPredicted RBP27.52■■■□□ 2
ITSN2-205ENST00000412011 A0A1W2PP64 1363 aa27.51■■■□□ 2
ITSN2-205ENST00000412011 CD163L1Q9NR16 1453 aa27.49■■□□□ 1.99
ITSN2-205ENST00000412011 NSD2O96028 1365 aa27.49■■□□□ 1.99
ITSN2-205ENST00000412011 TECPR2O15040 1411 aa27.48■■□□□ 1.99
ITSN2-205ENST00000412011 PDE3BQ13370 1112 aa27.48■■□□□ 1.99
ITSN2-205ENST00000412011 ADAMTS13Q76LX8 1427 aa27.48■■□□□ 1.99
ITSN2-205ENST00000412011 CPS1P31327 1500 aa27.47■■□□□ 1.99
ITSN2-205ENST00000412011 LTKP29376 864 aa27.47■■□□□ 1.99
ITSN2-205ENST00000412011 POLR3AO14802 1390 aaPredicted RBP27.47■■□□□ 1.99
ITSN2-205ENST00000412011 PLEKHG1Q9ULL1 1385 aa27.47■■□□□ 1.99
ITSN2-205ENST00000412011 PLPPR3Q6T4P5 718 aa27.47■■□□□ 1.99
ITSN2-205ENST00000412011 SLIT1O75093 1534 aa27.45■■□□□ 1.99
ITSN2-205ENST00000412011 FAM135BQ49AJ0 1406 aa27.45■■□□□ 1.98
ITSN2-205ENST00000412011 TXNDC2Q86VQ3 553 aa27.45■■□□□ 1.98
ITSN2-205ENST00000412011 SIRT1Q96EB6 747 aa27.45■■□□□ 1.98
ITSN2-205ENST00000412011 TERF2IPQ9NYB0 399 aa27.45■■□□□ 1.98
ITSN2-205ENST00000412011 ARHGAP23Q9P227 1491 aa27.44■■□□□ 1.98
ITSN2-205ENST00000412011 ANKRD26Q9UPS8 1709 aa27.43■■□□□ 1.98
ITSN2-205ENST00000412011 TNNT2P45379 298 aaPredicted RBP27.43■■□□□ 1.98
ITSN2-205ENST00000412011 SHPRHQ149N8 1683 aa27.43■■□□□ 1.98
ITSN2-205ENST00000412011 ERICH6BQ5W0A0 696 aa27.42■■□□□ 1.98
ITSN2-205ENST00000412011 RNF123Q5XPI4 1314 aa27.41■■□□□ 1.98
ITSN2-205ENST00000412011 MED14O60244 1454 aa27.4■■□□□ 1.98
ITSN2-205ENST00000412011 CABP1Q9NZU7 370 aa27.4■■□□□ 1.98
ITSN2-205ENST00000412011 RIMS1Q86UR5 1692 aaKnown RBP27.39■■□□□ 1.98
ITSN2-205ENST00000412011 EID1Q9Y6B2 187 aa27.39■■□□□ 1.98
ITSN2-205ENST00000412011 PELP1Q8IZL8 1130 aaKnown RBP27.39■■□□□ 1.97
ITSN2-205ENST00000412011 HDGFL2Q7Z4V5 671 aaPredicted RBP27.38■■□□□ 1.97
ITSN2-205ENST00000412011 CDCA7LQ96GN5 454 aa27.38■■□□□ 1.97
ITSN2-205ENST00000412011 KIF20BQ96Q89 1820 aa27.38■■□□□ 1.97
ITSN2-205ENST00000412011 WASLO00401 505 aaPredicted RBP27.37■■□□□ 1.97
ITSN2-205ENST00000412011 ATP7BP35670 1465 aa27.36■■□□□ 1.97
ITSN2-205ENST00000412011 MTHFSP49914 203 aa27.35■■□□□ 1.97
ITSN2-205ENST00000412011 ROBO2Q9HCK4 1378 aa27.35■■□□□ 1.97
ITSN2-205ENST00000412011 CCDC146Q8IYE0 955 aa27.34■■□□□ 1.97
ITSN2-205ENST00000412011 THEMISQ8N1K5 641 aaPredicted RBP27.34■■□□□ 1.97
ITSN2-205ENST00000412011 FYB1O15117 783 aa27.33■■□□□ 1.97
ITSN2-205ENST00000412011 GGNBP2Q9H3C7 697 aa27.33■■□□□ 1.97
ITSN2-205ENST00000412011 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.31■■□□□ 1.96
ITSN2-205ENST00000412011 SLC26A8Q96RN1 970 aa27.31■■□□□ 1.96
ITSN2-205ENST00000412011 ZNF521Q96K83 1311 aa27.31■■□□□ 1.96
ITSN2-205ENST00000412011 PTPRUQ92729 1446 aa27.31■■□□□ 1.96
ITSN2-205ENST00000412011 CEP170BQ9Y4F5 1589 aaPredicted RBP27.3■■□□□ 1.96
ITSN2-205ENST00000412011 ADAMTSL3P82987 1691 aa27.3■■□□□ 1.96
ITSN2-205ENST00000412011 ADGRB2O60241 1585 aa27.29■■□□□ 1.96
ITSN2-205ENST00000412011 PPIP5K1Q6PFW1 1433 aa27.29■■□□□ 1.96
ITSN2-205ENST00000412011 CFAP53Q96M91 514 aa27.29■■□□□ 1.96
ITSN2-205ENST00000412011 PPP4R2Q9NY27 417 aa27.29■■□□□ 1.96
ITSN2-205ENST00000412011 APAF1O14727 1248 aa27.28■■□□□ 1.96
ITSN2-205ENST00000412011 RCAN3Q9UKA8 241 aa27.28■■□□□ 1.96
ITSN2-205ENST00000412011 DIP2AQ14689 1571 aa27.27■■□□□ 1.96
ITSN2-205ENST00000412011 NUDT16Q96DE0 195 aaKnown RBP27.27■■□□□ 1.96
ITSN2-205ENST00000412011 TBX22Q9Y458 520 aa27.27■■□□□ 1.96
ITSN2-205ENST00000412011 CPSF1Q10570 1443 aaKnown RBP27.27■■□□□ 1.96
ITSN2-205ENST00000412011 CDC42BPGQ6DT37 1551 aa27.25■■□□□ 1.95
ITSN2-205ENST00000412011 AKAP12Q02952 1782 aa27.25■■□□□ 1.95
ITSN2-205ENST00000412011 MON2Q7Z3U7 1717 aa27.25■■□□□ 1.95
ITSN2-205ENST00000412011 ITSN1Q15811 1721 aa27.24■■□□□ 1.95
ITSN2-205ENST00000412011 CCDC61Q9Y6R9 512 aa27.23■■□□□ 1.95
ITSN2-205ENST00000412011 EDC4Q6P2E9 1401 aaKnown RBP27.22■■□□□ 1.95
ITSN2-205ENST00000412011 GOLGA2Q08379 1002 aa27.21■■□□□ 1.95
ITSN2-205ENST00000412011 PRR36Q9H6K5 1346 aa27.21■■□□□ 1.95
ITSN2-205ENST00000412011 NGEFQ8N5V2 710 aa27.21■■□□□ 1.95
ITSN2-205ENST00000412011 AMOTL2Q9Y2J4 779 aa27.21■■□□□ 1.95
ITSN2-205ENST00000412011 ZNF142P52746 1687 aaPredicted RBP27.21■■□□□ 1.95
ITSN2-205ENST00000412011 NCKAP5LQ9HCH0 1330 aa27.2■■□□□ 1.95
ITSN2-205ENST00000412011 RRP1P56182 461 aaKnown RBP27.2■■□□□ 1.95
ITSN2-205ENST00000412011 SUGP2Q8IX01 1082 aaKnown RBP eCLIP27.2■■□□□ 1.95
ITSN2-205ENST00000412011 COL3A1P02461 1466 aaPredicted RBP27.2■■□□□ 1.94
ITSN2-205ENST00000412011 TOPAZ1Q8N9V7 1692 aa27.19■■□□□ 1.94
ITSN2-205ENST00000412011 PTCH1Q13635 1447 aa27.19■■□□□ 1.94
ITSN2-205ENST00000412011 DUSP27Q5VZP5 1158 aa27.18■■□□□ 1.94
ITSN2-205ENST00000412011 XRN1Q8IZH2 1706 aaKnown RBP27.18■■□□□ 1.94
ITSN2-205ENST00000412011 RUNDC1Q96C34 613 aa27.18■■□□□ 1.94
ITSN2-205ENST00000412011 IQSEC2Q5JU85 1478 aa27.17■■□□□ 1.94
ITSN2-205ENST00000412011 SLFN5Q08AF3 891 aa27.16■■□□□ 1.94
Retrieved 100 of 20,778 RNA–protein pairs in 50.4 ms