RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 PIK3R4Q99570 1358 aa12.51□□□□□ -0.41
LINC02539-201ENST00000411615 TRPM1Q7Z4N2 1603 aa12.5□□□□□ -0.41
LINC02539-201ENST00000411615 SETD1AO15047 1707 aaKnown RBP12.49□□□□□ -0.41
LINC02539-201ENST00000411615 RALGAPBQ86X10 1494 aa12.49□□□□□ -0.41
LINC02539-201ENST00000411615 C19orf67A6NJJ6 358 aa12.49□□□□□ -0.41
LINC02539-201ENST00000411615 CFAP70Q5T0N1 1121 aa12.49□□□□□ -0.41
LINC02539-201ENST00000411615 GPRASP1Q5JY77 1395 aa12.48□□□□□ -0.41
LINC02539-201ENST00000411615 BCANQ96GW7 911 aa12.48□□□□□ -0.41
LINC02539-201ENST00000411615 CREBZFQ9NS37 354 aa12.48□□□□□ -0.41
LINC02539-201ENST00000411615 ADGRB1O14514 1584 aa12.47□□□□□ -0.41
LINC02539-201ENST00000411615 SLC26A8Q96RN1 970 aa12.46□□□□□ -0.41
LINC02539-201ENST00000411615 SIRT1Q96EB6 747 aa12.45□□□□□ -0.42
LINC02539-201ENST00000411615 FARP1Q9Y4F1 1045 aaPredicted RBP12.45□□□□□ -0.42
LINC02539-201ENST00000411615 CHD2O14647 1828 aaKnown RBP12.45□□□□□ -0.42
LINC02539-201ENST00000411615 ROCK2O75116 1388 aaKnown RBP12.44□□□□□ -0.42
LINC02539-201ENST00000411615 METP08581 1390 aa12.44□□□□□ -0.42
LINC02539-201ENST00000411615 ABCC11Q96J66 1382 aa12.44□□□□□ -0.42
LINC02539-201ENST00000411615 NBPF1Q3BBV0 1214 aa12.44□□□□□ -0.42
LINC02539-201ENST00000411615 LRPPRCP42704 1394 aaKnown RBP12.43□□□□□ -0.42
LINC02539-201ENST00000411615 ASXL1Q8IXJ9 1541 aa12.43□□□□□ -0.42
LINC02539-201ENST00000411615 KCNA6P17658 529 aa12.43□□□□□ -0.42
LINC02539-201ENST00000411615 TECPR2O15040 1411 aa12.43□□□□□ -0.42
LINC02539-201ENST00000411615 YTHDC2Q9H6S0 1430 aaKnown RBP12.43□□□□□ -0.42
LINC02539-201ENST00000411615 TMEM132EQ6IEE7 984 aa12.42□□□□□ -0.42
LINC02539-201ENST00000411615 CARD11Q9BXL7 1154 aa12.42□□□□□ -0.42
LINC02539-201ENST00000411615 NWD1Q149M9 1564 aa12.42□□□□□ -0.42
LINC02539-201ENST00000411615 KNDC1Q76NI1 1749 aa12.42□□□□□ -0.42
LINC02539-201ENST00000411615 DLC1Q96QB1 1528 aa12.42□□□□□ -0.42
LINC02539-201ENST00000411615 XRN1Q8IZH2 1706 aaKnown RBP12.41□□□□□ -0.42
LINC02539-201ENST00000411615 PTPRUQ92729 1446 aa12.41□□□□□ -0.42
LINC02539-201ENST00000411615 FAM135BQ49AJ0 1406 aa12.4□□□□□ -0.42
LINC02539-201ENST00000411615 AMOTL2Q9Y2J4 779 aa12.4□□□□□ -0.42
LINC02539-201ENST00000411615 PTCH1Q13635 1447 aa12.39□□□□□ -0.43
LINC02539-201ENST00000411615 CPS1P31327 1500 aa12.39□□□□□ -0.43
LINC02539-201ENST00000411615 SLC24A1O60721 1099 aa12.39□□□□□ -0.43
LINC02539-201ENST00000411615 PROM2Q8N271 834 aa12.39□□□□□ -0.43
LINC02539-201ENST00000411615 EIF3AQ14152 1382 aaKnown RBP12.39□□□□□ -0.43
LINC02539-201ENST00000411615 NKTRP30414 1462 aaKnown RBP12.39□□□□□ -0.43
LINC02539-201ENST00000411615 NCOA3Q9Y6Q9 1424 aa12.37□□□□□ -0.43
LINC02539-201ENST00000411615 TRAK1Q9UPV9 953 aa12.37□□□□□ -0.43
LINC02539-201ENST00000411615 ARHGEF28Q8N1W1 1705 aaKnown RBP12.37□□□□□ -0.43
LINC02539-201ENST00000411615 USP47Q96K76 1375 aa12.36□□□□□ -0.43
LINC02539-201ENST00000411615 EIF4G2P78344 907 aaKnown RBP eCLIP12.36□□□□□ -0.43
LINC02539-201ENST00000411615 STK26Q9P289 416 aa12.36□□□□□ -0.43
LINC02539-201ENST00000411615 STRCP1A6NGW2 1772 aa12.35□□□□□ -0.43
LINC02539-201ENST00000411615 ROBO2Q9HCK4 1378 aa12.35□□□□□ -0.43
LINC02539-201ENST00000411615 SBNO2Q9Y2G9 1366 aa12.35□□□□□ -0.43
LINC02539-201ENST00000411615 CD44P16070 742 aaKnown RBP12.35□□□□□ -0.43
LINC02539-201ENST00000411615 ZNF335Q9H4Z2 1342 aaPredicted RBP12.34□□□□□ -0.43
LINC02539-201ENST00000411615 CENPJQ9HC77 1338 aaPredicted RBP12.34□□□□□ -0.43
LINC02539-201ENST00000411615 FKBP8Q14318 412 aa12.33□□□□□ -0.44
LINC02539-201ENST00000411615 PROSER2Q86WR7 435 aaPredicted RBP12.33□□□□□ -0.44
LINC02539-201ENST00000411615 PRAM1Q96QH2 718 aa12.33□□□□□ -0.44
LINC02539-201ENST00000411615 POGKQ9P215 609 aa12.33□□□□□ -0.44
LINC02539-201ENST00000411615 ST20-MTHFSA0A0A6YYL1 179 aa12.32□□□□□ -0.44
LINC02539-201ENST00000411615 GABBR2O75899 941 aa12.32□□□□□ -0.44
LINC02539-201ENST00000411615 LTBP4Q8N2S1 1624 aa12.32□□□□□ -0.44
LINC02539-201ENST00000411615 HSPA5P11021 654 aaKnown RBP12.31□□□□□ -0.44
LINC02539-201ENST00000411615 WAPLQ7Z5K2 1190 aa12.31□□□□□ -0.44
LINC02539-201ENST00000411615 LRRC7Q96NW7 1537 aa12.31□□□□□ -0.44
LINC02539-201ENST00000411615 QRICH2Q9H0J4 1663 aa12.3□□□□□ -0.44
LINC02539-201ENST00000411615 MNX1P50219 401 aaPredicted RBP12.3□□□□□ -0.44
LINC02539-201ENST00000411615 PUS7Q96PZ0 661 aaKnown RBP12.3□□□□□ -0.44
LINC02539-201ENST00000411615 TESK2Q96S53 571 aa12.3□□□□□ -0.44
LINC02539-201ENST00000411615 PLEKHH1Q9ULM0 1364 aa12.3□□□□□ -0.44
LINC02539-201ENST00000411615 C19orf44Q9H6X5 657 aa12.29□□□□□ -0.44
LINC02539-201ENST00000411615 ADGRB2O60241 1585 aa12.29□□□□□ -0.44
LINC02539-201ENST00000411615 TMEM94Q12767 1356 aa12.29□□□□□ -0.44
LINC02539-201ENST00000411615 ADGRL3Q9HAR2 1447 aa12.28□□□□□ -0.44
LINC02539-201ENST00000411615 SIPA1L2Q9P2F8 1722 aaPredicted RBP12.28□□□□□ -0.44
LINC02539-201ENST00000411615 XIRP1Q702N8 1843 aaKnown RBP12.28□□□□□ -0.44
LINC02539-201ENST00000411615 DCCP43146 1447 aa12.28□□□□□ -0.44
LINC02539-201ENST00000411615 IQSEC2Q5JU85 1478 aa12.27□□□□□ -0.44
LINC02539-201ENST00000411615 TMF1P82094 1093 aa12.26□□□□□ -0.45
LINC02539-201ENST00000411615 CDCA8Q53HL2 280 aa12.26□□□□□ -0.45
LINC02539-201ENST00000411615 EVC2Q86UK5 1308 aa12.26□□□□□ -0.45
LINC02539-201ENST00000411615 CDC42BPGQ6DT37 1551 aa12.26□□□□□ -0.45
LINC02539-201ENST00000411615 NALCNQ8IZF0 1738 aa12.25□□□□□ -0.45
LINC02539-201ENST00000411615 WASLO00401 505 aaPredicted RBP12.25□□□□□ -0.45
LINC02539-201ENST00000411615 SAFB2Q14151 953 aaKnown RBP eCLIP12.25□□□□□ -0.45
LINC02539-201ENST00000411615 MINK1Q8N4C8 1332 aaPredicted RBP12.25□□□□□ -0.45
LINC02539-201ENST00000411615 MSH6P52701 1360 aa12.25□□□□□ -0.45
LINC02539-201ENST00000411615 CADPS2Q86UW7 1296 aa12.24□□□□□ -0.45
LINC02539-201ENST00000411615 C14orf37Q86TY3 774 aa12.23□□□□□ -0.45
LINC02539-201ENST00000411615 TULP4Q9NRJ4 1543 aa12.22□□□□□ -0.45
LINC02539-201ENST00000411615 ANKARQ7Z5J8 1434 aa12.22□□□□□ -0.45
LINC02539-201ENST00000411615 ATF3P18847 181 aa12.22□□□□□ -0.45
LINC02539-201ENST00000411615 RBM33Q96EV2 1170 aaKnown RBP12.22□□□□□ -0.45
LINC02539-201ENST00000411615 HIRIP3Q9BW71 556 aaPredicted RBP12.22□□□□□ -0.45
LINC02539-201ENST00000411615 CDK19Q9BWU1 502 aa12.22□□□□□ -0.45
LINC02539-201ENST00000411615 FMN2Q9NZ56 1722 aa12.22□□□□□ -0.45
LINC02539-201ENST00000411615 ATAD2Q6PL18 1390 aa12.21□□□□□ -0.45
LINC02539-201ENST00000411615 ZRANB1Q9UGI0 708 aa12.21□□□□□ -0.45
LINC02539-201ENST00000411615 CERKQ8TCT0 537 aa12.2□□□□□ -0.46
LINC02539-201ENST00000411615 DISP3Q9P2K9 1392 aa12.19□□□□□ -0.46
LINC02539-201ENST00000411615 NINLQ9Y2I6 1382 aa12.19□□□□□ -0.46
LINC02539-201ENST00000411615 ZNF316A6NFI3 1004 aaPredicted RBP12.19□□□□□ -0.46
LINC02539-201ENST00000411615 C11orf95C9JLR9 678 aaPredicted RBP12.19□□□□□ -0.46
LINC02539-201ENST00000411615 SRPK2P78362 688 aaKnown RBP12.19□□□□□ -0.46
LINC02539-201ENST00000411615 CCDC61Q9Y6R9 512 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms