RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 MYOM1P52179 1685 aa14.5□□□□□ -0.09
LRRTM4-204ENST00000409884 FGD1P98174 961 aa14.5□□□□□ -0.09
LRRTM4-204ENST00000409884 SETD1AO15047 1707 aaKnown RBP14.49□□□□□ -0.09
LRRTM4-204ENST00000409884 SLC26A8Q96RN1 970 aa14.49□□□□□ -0.09
LRRTM4-204ENST00000409884 ADAMTSL3P82987 1691 aa14.49□□□□□ -0.09
LRRTM4-204ENST00000409884 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.49□□□□□ -0.09
LRRTM4-204ENST00000409884 MRS2Q9HD23 443 aa14.49□□□□□ -0.09
LRRTM4-204ENST00000409884 CABP2Q9NPB3 220 aa14.49□□□□□ -0.09
LRRTM4-204ENST00000409884 PLEKHH1Q9ULM0 1364 aa14.48□□□□□ -0.09
LRRTM4-204ENST00000409884 KDM5AP29375 1690 aaKnown RBP14.48□□□□□ -0.09
LRRTM4-204ENST00000409884 CDCA8Q53HL2 280 aa14.47□□□□□ -0.09
LRRTM4-204ENST00000409884 SLC12A5Q9H2X9 1139 aa14.47□□□□□ -0.09
LRRTM4-204ENST00000409884 POGKQ9P215 609 aa14.47□□□□□ -0.09
LRRTM4-204ENST00000409884 SBNO2Q9Y2G9 1366 aa14.47□□□□□ -0.09
LRRTM4-204ENST00000409884 TMC1Q8TDI8 760 aa14.47□□□□□ -0.09
LRRTM4-204ENST00000409884 TULP4Q9NRJ4 1543 aa14.47□□□□□ -0.09
LRRTM4-204ENST00000409884 FAM9BQ8IZU0 186 aa14.46□□□□□ -0.09
LRRTM4-204ENST00000409884 CARD14Q9BXL6 1004 aa14.46□□□□□ -0.1
LRRTM4-204ENST00000409884 SENP3-EIF4A1A0A087X0R7 540 aa14.45□□□□□ -0.1
LRRTM4-204ENST00000409884 ADAMTS13Q76LX8 1427 aa14.45□□□□□ -0.1
LRRTM4-204ENST00000409884 HDGFP51858 240 aaKnown RBP14.45□□□□□ -0.1
LRRTM4-204ENST00000409884 GLIPR1L2Q4G1C9 344 aa14.44□□□□□ -0.1
LRRTM4-204ENST00000409884 THEMISQ8N1K5 641 aaPredicted RBP14.43□□□□□ -0.1
LRRTM4-204ENST00000409884 LRPPRCP42704 1394 aaKnown RBP14.43□□□□□ -0.1
LRRTM4-204ENST00000409884 SRPK2P78362 688 aaKnown RBP14.43□□□□□ -0.1
LRRTM4-204ENST00000409884 AEBP2Q6ZN18 517 aaPredicted RBP14.43□□□□□ -0.1
LRRTM4-204ENST00000409884 ZMYND15Q9H091 742 aa14.43□□□□□ -0.1
LRRTM4-204ENST00000409884 EID1Q9Y6B2 187 aa14.43□□□□□ -0.1
LRRTM4-204ENST00000409884 CEP170BQ9Y4F5 1589 aaPredicted RBP14.43□□□□□ -0.1
LRRTM4-204ENST00000409884 EVC2Q86UK5 1308 aa14.42□□□□□ -0.1
LRRTM4-204ENST00000409884 KNSTRNQ9Y448 316 aa14.42□□□□□ -0.1
LRRTM4-204ENST00000409884 KTN1Q86UP2 1357 aaKnown RBP14.42□□□□□ -0.1
LRRTM4-204ENST00000409884 AMER1Q5JTC6 1135 aaPredicted RBP14.42□□□□□ -0.1
LRRTM4-204ENST00000409884 IL27Q8NEV9 243 aa14.42□□□□□ -0.1
LRRTM4-204ENST00000409884 PLEKHG1Q9ULL1 1385 aa14.42□□□□□ -0.1
LRRTM4-204ENST00000409884 ARHGAP23Q9P227 1491 aa14.41□□□□□ -0.1
LRRTM4-204ENST00000409884 SLIT1O75093 1534 aa14.41□□□□□ -0.1
LRRTM4-204ENST00000409884 PARD3Q8TEW0 1356 aa14.41□□□□□ -0.1
LRRTM4-204ENST00000409884 ABCC11Q96J66 1382 aa14.41□□□□□ -0.1
LRRTM4-204ENST00000409884 CDK19Q9BWU1 502 aa14.39□□□□□ -0.11
LRRTM4-204ENST00000409884 ROBO2Q9HCK4 1378 aa14.39□□□□□ -0.11
LRRTM4-204ENST00000409884 MYBBP1AQ9BQG0 1328 aaKnown RBP14.39□□□□□ -0.11
LRRTM4-204ENST00000409884 FANCIQ9NVI1 1328 aa14.39□□□□□ -0.11
LRRTM4-204ENST00000409884 RALBP1Q15311 655 aa14.39□□□□□ -0.11
LRRTM4-204ENST00000409884 BCL11BQ9C0K0 894 aaPredicted RBP14.39□□□□□ -0.11
LRRTM4-204ENST00000409884 PTPRUQ92729 1446 aa14.39□□□□□ -0.11
LRRTM4-204ENST00000409884 A0A0U1RQG5 324 aaPredicted RBP14.38□□□□□ -0.11
LRRTM4-204ENST00000409884 HNRNPUQ00839 825 aaKnown RBP eCLIP14.38□□□□□ -0.11
LRRTM4-204ENST00000409884 NCKAP5LQ9HCH0 1330 aa14.38□□□□□ -0.11
LRRTM4-204ENST00000409884 AAMPQ13685 434 aa14.37□□□□□ -0.11
LRRTM4-204ENST00000409884 RTN4Q9NQC3 1192 aaKnown RBP14.37□□□□□ -0.11
LRRTM4-204ENST00000409884 MED14O60244 1454 aa14.36□□□□□ -0.11
LRRTM4-204ENST00000409884 NSD3Q9BZ95 1437 aa14.36□□□□□ -0.11
LRRTM4-204ENST00000409884 DLC1Q96QB1 1528 aa14.36□□□□□ -0.11
LRRTM4-204ENST00000409884 SETD1BQ9UPS6 1966 aaKnown RBP14.36□□□□□ -0.11
LRRTM4-204ENST00000409884 AMOTL2Q9Y2J4 779 aa14.35□□□□□ -0.11
LRRTM4-204ENST00000409884 NUTM2FA1L443 756 aa14.35□□□□□ -0.11
LRRTM4-204ENST00000409884 PNISRQ8TF01 805 aaKnown RBP14.35□□□□□ -0.11
LRRTM4-204ENST00000409884 TNNT2P45379 298 aaPredicted RBP14.34□□□□□ -0.11
LRRTM4-204ENST00000409884 CABP1Q9NZU7 370 aa14.34□□□□□ -0.11
LRRTM4-204ENST00000409884 NLRP13Q86W25 1043 aa14.34□□□□□ -0.11
LRRTM4-204ENST00000409884 RBM33Q96EV2 1170 aaKnown RBP14.34□□□□□ -0.11
LRRTM4-204ENST00000409884 TBX22Q9Y458 520 aa14.33□□□□□ -0.12
LRRTM4-204ENST00000409884 TECPR2O15040 1411 aa14.33□□□□□ -0.12
LRRTM4-204ENST00000409884 PPP2R1AP30153 589 aa14.33□□□□□ -0.12
LRRTM4-204ENST00000409884 ANKLE2Q86XL3 938 aa14.33□□□□□ -0.12
LRRTM4-204ENST00000409884 A0A1W2PP64 1363 aa14.33□□□□□ -0.12
LRRTM4-204ENST00000409884 CPS1P31327 1500 aa14.32□□□□□ -0.12
LRRTM4-204ENST00000409884 ZNF142P52746 1687 aaPredicted RBP14.32□□□□□ -0.12
LRRTM4-204ENST00000409884 BRD4O60885 1362 aaPredicted RBP14.31□□□□□ -0.12
LRRTM4-204ENST00000409884 WASLO00401 505 aaPredicted RBP14.31□□□□□ -0.12
LRRTM4-204ENST00000409884 KCNA6P17658 529 aa14.31□□□□□ -0.12
LRRTM4-204ENST00000409884 KNDC1Q76NI1 1749 aa14.31□□□□□ -0.12
LRRTM4-204ENST00000409884 SIPA1L2Q9P2F8 1722 aaPredicted RBP14.31□□□□□ -0.12
LRRTM4-204ENST00000409884 RBM10P98175 930 aaKnown RBP14.31□□□□□ -0.12
LRRTM4-204ENST00000409884 CD163L1Q9NR16 1453 aa14.31□□□□□ -0.12
LRRTM4-204ENST00000409884 FAM135BQ49AJ0 1406 aa14.3□□□□□ -0.12
LRRTM4-204ENST00000409884 ANKRD36BQ8N2N9 1353 aa14.3□□□□□ -0.12
LRRTM4-204ENST00000409884 KDM4FA0A1W2PPD8 638 aa14.3□□□□□ -0.12
LRRTM4-204ENST00000409884 PUS7Q96PZ0 661 aaKnown RBP14.3□□□□□ -0.12
LRRTM4-204ENST00000409884 ATAD2Q6PL18 1390 aa14.29□□□□□ -0.12
LRRTM4-204ENST00000409884 PRR36Q9H6K5 1346 aa14.29□□□□□ -0.12
LRRTM4-204ENST00000409884 VSIG10Q8N0Z9 540 aa14.29□□□□□ -0.12
LRRTM4-204ENST00000409884 TAF7LQ5H9L4 462 aa14.29□□□□□ -0.12
LRRTM4-204ENST00000409884 HSPA2P54652 639 aa14.28□□□□□ -0.12
LRRTM4-204ENST00000409884 NUDT16Q96DE0 195 aaKnown RBP14.28□□□□□ -0.12
LRRTM4-204ENST00000409884 SIRT1Q96EB6 747 aa14.27□□□□□ -0.12
LRRTM4-204ENST00000409884 GGNBP2Q9H3C7 697 aa14.27□□□□□ -0.12
LRRTM4-204ENST00000409884 NPC1L1Q9UHC9 1359 aa14.27□□□□□ -0.13
LRRTM4-204ENST00000409884 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.26□□□□□ -0.132e-7■■■■□ 25.5
LRRTM4-204ENST00000409884 MORC1Q86VD1 984 aa14.26□□□□□ -0.13
LRRTM4-204ENST00000409884 CGNL1Q0VF96 1302 aa14.25□□□□□ -0.13
LRRTM4-204ENST00000409884 PPIP5K1Q6PFW1 1433 aa14.25□□□□□ -0.13
LRRTM4-204ENST00000409884 TERF2IPQ9NYB0 399 aa14.25□□□□□ -0.13
LRRTM4-204ENST00000409884 FBLN1P23142 703 aa14.24□□□□□ -0.13
LRRTM4-204ENST00000409884 XRN1Q8IZH2 1706 aaKnown RBP14.24□□□□□ -0.13
LRRTM4-204ENST00000409884 FYB1O15117 783 aa14.23□□□□□ -0.13
LRRTM4-204ENST00000409884 NPHP4O75161 1426 aaPredicted RBP14.23□□□□□ -0.13
LRRTM4-204ENST00000409884 DIP2AQ14689 1571 aa14.23□□□□□ -0.13
LRRTM4-204ENST00000409884 ATP7BP35670 1465 aa14.23□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms