RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 ST20-MTHFSA0A0A6YYL1 179 aa29.02■■■□□ 2.24
C4orf48-202ENST00000409860 MINK1Q8N4C8 1332 aaPredicted RBP29.01■■■□□ 2.23
C4orf48-202ENST00000409860 CERKQ8TCT0 537 aa29.01■■■□□ 2.23
C4orf48-202ENST00000409860 C19orf44Q9H6X5 657 aa29.01■■■□□ 2.23
C4orf48-202ENST00000409860 IQSEC2Q5JU85 1478 aa28.99■■■□□ 2.23
C4orf48-202ENST00000409860 HSPA5P11021 654 aaKnown RBP28.98■■■□□ 2.23
C4orf48-202ENST00000409860 SBNO2Q9Y2G9 1366 aa28.98■■■□□ 2.23
C4orf48-202ENST00000409860 SIPA1L2Q9P2F8 1722 aaPredicted RBP28.97■■■□□ 2.23
C4orf48-202ENST00000409860 DCCP43146 1447 aa28.97■■■□□ 2.23
C4orf48-202ENST00000409860 QRICH2Q9H0J4 1663 aa28.97■■■□□ 2.23
C4orf48-202ENST00000409860 HIRIP3Q9BW71 556 aaPredicted RBP28.97■■■□□ 2.23
C4orf48-202ENST00000409860 NALCNQ8IZF0 1738 aa28.97■■■□□ 2.23
C4orf48-202ENST00000409860 XIRP1Q702N8 1843 aaKnown RBP28.96■■■□□ 2.23
C4orf48-202ENST00000409860 SLC24A1O60721 1099 aa28.95■■■□□ 2.22
C4orf48-202ENST00000409860 ATF3P18847 181 aa28.95■■■□□ 2.22
C4orf48-202ENST00000409860 ADGRB2O60241 1585 aa28.95■■■□□ 2.22
C4orf48-202ENST00000409860 CDC42BPGQ6DT37 1551 aa28.93■■■□□ 2.22
C4orf48-202ENST00000409860 CADPS2Q86UW7 1296 aa28.93■■■□□ 2.22
C4orf48-202ENST00000409860 TESK2Q96S53 571 aa28.92■■■□□ 2.22
C4orf48-202ENST00000409860 WASLO00401 505 aaPredicted RBP28.91■■■□□ 2.22
C4orf48-202ENST00000409860 EVC2Q86UK5 1308 aa28.91■■■□□ 2.22
C4orf48-202ENST00000409860 TMF1P82094 1093 aa28.87■■■□□ 2.21
C4orf48-202ENST00000409860 CDK19Q9BWU1 502 aa28.87■■■□□ 2.21
C4orf48-202ENST00000409860 TULP4Q9NRJ4 1543 aa28.86■■■□□ 2.21
C4orf48-202ENST00000409860 SRPK2P78362 688 aaKnown RBP28.85■■■□□ 2.21
C4orf48-202ENST00000409860 TOM1O60784 492 aa28.84■■■□□ 2.21
C4orf48-202ENST00000409860 MST1RQ04912 1400 aa28.82■■■□□ 2.2
C4orf48-202ENST00000409860 FMN2Q9NZ56 1722 aa28.81■■■□□ 2.2
C4orf48-202ENST00000409860 ANKARQ7Z5J8 1434 aa28.81■■■□□ 2.2
C4orf48-202ENST00000409860 NUTM2FA1L443 756 aa28.81■■■□□ 2.2
C4orf48-202ENST00000409860 UBAP1LF5GYI3 381 aa28.81■■■□□ 2.2
C4orf48-202ENST00000409860 CDCA8Q53HL2 280 aa28.81■■■□□ 2.2
C4orf48-202ENST00000409860 CABP2Q9NPB3 220 aa28.8■■■□□ 2.2
C4orf48-202ENST00000409860 SLAIN2Q9P270 581 aa28.8■■■□□ 2.2
C4orf48-202ENST00000409860 DISP3Q9P2K9 1392 aa28.79■■■□□ 2.2
C4orf48-202ENST00000409860 C1orf167Q5SNV9 1468 aa28.78■■■□□ 2.2
C4orf48-202ENST00000409860 PUS7Q96PZ0 661 aaKnown RBP28.77■■■□□ 2.2
C4orf48-202ENST00000409860 ATAD2Q6PL18 1390 aa28.76■■■□□ 2.2
C4orf48-202ENST00000409860 NUDT16Q96DE0 195 aaKnown RBP28.76■■■□□ 2.19
C4orf48-202ENST00000409860 PRR36Q9H6K5 1346 aa28.75■■■□□ 2.19
C4orf48-202ENST00000409860 ATP7BP35670 1465 aa28.75■■■□□ 2.19
C4orf48-202ENST00000409860 ESCO1Q5FWF5 840 aa28.72■■■□□ 2.19
C4orf48-202ENST00000409860 CCDC61Q9Y6R9 512 aa28.72■■■□□ 2.19
C4orf48-202ENST00000409860 USP32Q8NFA0 1604 aa28.7■■■□□ 2.19
C4orf48-202ENST00000409860 PIP4K2BP78356 416 aa28.69■■■□□ 2.18
C4orf48-202ENST00000409860 ORAI2Q96SN7 254 aa28.69■■■□□ 2.18
C4orf48-202ENST00000409860 SCAF1Q9H7N4 1312 aaKnown RBP28.69■■■□□ 2.18
C4orf48-202ENST00000409860 POLR3GLQ9BT43 218 aa28.68■■■□□ 2.18
C4orf48-202ENST00000409860 BRINP3Q76B58 766 aa28.67■■■□□ 2.18
C4orf48-202ENST00000409860 PHF8Q9UPP1 1060 aa28.67■■■□□ 2.18
C4orf48-202ENST00000409860 PPIP5K1Q6PFW1 1433 aa28.67■■■□□ 2.18
C4orf48-202ENST00000409860 C11orf95C9JLR9 678 aaPredicted RBP28.66■■■□□ 2.18
C4orf48-202ENST00000409860 KIF7Q2M1P5 1343 aa28.65■■■□□ 2.18
C4orf48-202ENST00000409860 NINLQ9Y2I6 1382 aa28.64■■■□□ 2.18
C4orf48-202ENST00000409860 ITSN1Q15811 1721 aa28.64■■■□□ 2.18
C4orf48-202ENST00000409860 TMC1Q8TDI8 760 aa28.64■■■□□ 2.18
C4orf48-202ENST00000409860 CABP1Q9NZU7 370 aa28.64■■■□□ 2.18
C4orf48-202ENST00000409860 PLEKHG3A1L390 1219 aa28.63■■■□□ 2.17
C4orf48-202ENST00000409860 PMFBP1Q8TBY8 1022 aa28.63■■■□□ 2.17
C4orf48-202ENST00000409860 TOPAZ1Q8N9V7 1692 aa28.63■■■□□ 2.17
C4orf48-202ENST00000409860 KIF1AQ12756 1690 aa28.61■■■□□ 2.17
C4orf48-202ENST00000409860 CCDC7Q96M83 1385 aa28.61■■■□□ 2.17
C4orf48-202ENST00000409860 NGDNQ8NEJ9 315 aaKnown RBP28.6■■■□□ 2.17
C4orf48-202ENST00000409860 ROBO1Q9Y6N7 1651 aa28.6■■■□□ 2.17
C4orf48-202ENST00000409860 RGPD8O14715 1765 aaPredicted RBP28.6■■■□□ 2.17
C4orf48-202ENST00000409860 SLC12A5Q9H2X9 1139 aa28.58■■■□□ 2.17
C4orf48-202ENST00000409860 WASHC2AQ641Q2 1341 aa28.58■■■□□ 2.17
C4orf48-202ENST00000409860 NPHP3Q7Z494 1330 aa28.57■■■□□ 2.16
C4orf48-202ENST00000409860 POLR3AO14802 1390 aaPredicted RBP28.56■■■□□ 2.16
C4orf48-202ENST00000409860 FOXO3O43524 673 aa28.56■■■□□ 2.16
C4orf48-202ENST00000409860 ACEP12821 1306 aa28.56■■■□□ 2.16
C4orf48-202ENST00000409860 TERF2IPQ9NYB0 399 aa28.55■■■□□ 2.16
C4orf48-202ENST00000409860 HDGFL2Q7Z4V5 671 aaPredicted RBP28.54■■■□□ 2.16
C4orf48-202ENST00000409860 FBXO41Q8TF61 875 aa28.54■■■□□ 2.16
C4orf48-202ENST00000409860 ZNF316A6NFI3 1004 aaPredicted RBP28.53■■■□□ 2.16
C4orf48-202ENST00000409860 PSME1Q06323 249 aa28.53■■■□□ 2.16
C4orf48-202ENST00000409860 DDX17Q92841 729 aaKnown RBP28.51■■■□□ 2.15
C4orf48-202ENST00000409860 ZNF692Q9BU19 519 aaPredicted RBP28.51■■■□□ 2.15
C4orf48-202ENST00000409860 AHDC1Q5TGY3 1603 aaPredicted RBP28.51■■■□□ 2.15
C4orf48-202ENST00000409860 ANKRD36BQ8N2N9 1353 aa28.5■■■□□ 2.15
C4orf48-202ENST00000409860 CPSF1Q10570 1443 aaKnown RBP28.5■■■□□ 2.15
C4orf48-202ENST00000409860 KRT28Q7Z3Y7 464 aa28.49■■■□□ 2.15
C4orf48-202ENST00000409860 A0A1W2PP64 1363 aa28.49■■■□□ 2.15
C4orf48-202ENST00000409860 MYOM1P52179 1685 aa28.48■■■□□ 2.15
C4orf48-202ENST00000409860 CD163L1Q9NR16 1453 aa28.48■■■□□ 2.15
C4orf48-202ENST00000409860 NHSL1Q5SYE7 1610 aa28.48■■■□□ 2.15
C4orf48-202ENST00000409860 XPCQ01831 940 aaPredicted RBP28.48■■■□□ 2.15
C4orf48-202ENST00000409860 KTN1Q86UP2 1357 aaKnown RBP28.48■■■□□ 2.15
C4orf48-202ENST00000409860 SOS2Q07890 1332 aaPredicted RBP28.46■■■□□ 2.15
C4orf48-202ENST00000409860 USP6P35125 1406 aa28.46■■■□□ 2.15
C4orf48-202ENST00000409860 PXDNQ92626 1479 aa28.46■■■□□ 2.15
C4orf48-202ENST00000409860 BRD4O60885 1362 aaPredicted RBP28.45■■■□□ 2.14
C4orf48-202ENST00000409860 PANK3Q9H999 370 aa28.43■■■□□ 2.14
C4orf48-202ENST00000409860 SBNO1A3KN83 1393 aa28.42■■■□□ 2.14
C4orf48-202ENST00000409860 AKAP12Q02952 1782 aa28.41■■■□□ 2.14
C4orf48-202ENST00000409860 EDC4Q6P2E9 1401 aaKnown RBP28.41■■■□□ 2.14
C4orf48-202ENST00000409860 PHLPP1O60346 1717 aa28.4■■■□□ 2.14
C4orf48-202ENST00000409860 PAK3O75914 559 aaPredicted RBP28.4■■■□□ 2.14
C4orf48-202ENST00000409860 HSPA1LP34931 641 aa28.4■■■□□ 2.14
C4orf48-202ENST00000409860 LRRC59Q96AG4 307 aaKnown RBP28.39■■■□□ 2.14
Retrieved 100 of 20,778 RNA–protein pairs in 87.7 ms