RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 FKBP8Q14318 412 aa23.36■■□□□ 1.33
GCFC2-202ENST00000409857 PROSER2Q86WR7 435 aaPredicted RBP23.34■■□□□ 1.33
GCFC2-202ENST00000409857 QRICH2Q9H0J4 1663 aa23.33■■□□□ 1.33
GCFC2-202ENST00000409857 NALCNQ8IZF0 1738 aa23.33■■□□□ 1.32
GCFC2-202ENST00000409857 IQSEC2Q5JU85 1478 aa23.33■■□□□ 1.32
GCFC2-202ENST00000409857 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.32■■□□□ 1.32
GCFC2-202ENST00000409857 TMEM94Q12767 1356 aa23.32■■□□□ 1.32
GCFC2-202ENST00000409857 PRAM1Q96QH2 718 aa23.31■■□□□ 1.32
GCFC2-202ENST00000409857 USP47Q96K76 1375 aa23.31■■□□□ 1.32
GCFC2-202ENST00000409857 ADGRB2O60241 1585 aa23.31■■□□□ 1.32
GCFC2-202ENST00000409857 PLEKHH1Q9ULM0 1364 aa23.3■■□□□ 1.32
GCFC2-202ENST00000409857 WAPLQ7Z5K2 1190 aa23.29■■□□□ 1.32
GCFC2-202ENST00000409857 POGKQ9P215 609 aa23.29■■□□□ 1.32
GCFC2-202ENST00000409857 ADGRL3Q9HAR2 1447 aa23.29■■□□□ 1.32
GCFC2-202ENST00000409857 CENPJQ9HC77 1338 aaPredicted RBP23.29■■□□□ 1.32
GCFC2-202ENST00000409857 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.32
GCFC2-202ENST00000409857 CDC42BPGQ6DT37 1551 aa23.26■■□□□ 1.31
GCFC2-202ENST00000409857 DCCP43146 1447 aa23.26■■□□□ 1.31
GCFC2-202ENST00000409857 ANP32CO43423 234 aa23.24■■□□□ 1.31
GCFC2-202ENST00000409857 EIF4G2P78344 907 aaKnown RBP eCLIP23.24■■□□□ 1.31
GCFC2-202ENST00000409857 MSH6P52701 1360 aa23.23■■□□□ 1.31
GCFC2-202ENST00000409857 C19orf44Q9H6X5 657 aa23.23■■□□□ 1.31
GCFC2-202ENST00000409857 RBM33Q96EV2 1170 aaKnown RBP23.22■■□□□ 1.31
GCFC2-202ENST00000409857 ST20-MTHFSA0A0A6YYL1 179 aa23.21■■□□□ 1.31
GCFC2-202ENST00000409857 SLC24A1O60721 1099 aa23.21■■□□□ 1.31
GCFC2-202ENST00000409857 CERKQ8TCT0 537 aa23.21■■□□□ 1.31
GCFC2-202ENST00000409857 FMN2Q9NZ56 1722 aa23.21■■□□□ 1.31
GCFC2-202ENST00000409857 CCER2I3L3R5 266 aa23.2■■□□□ 1.3
GCFC2-202ENST00000409857 SAFB2Q14151 953 aaKnown RBP eCLIP23.2■■□□□ 1.3
GCFC2-202ENST00000409857 C14orf37Q86TY3 774 aa23.2■■□□□ 1.3
GCFC2-202ENST00000409857 MINK1Q8N4C8 1332 aaPredicted RBP23.18■■□□□ 1.3
GCFC2-202ENST00000409857 TESK2Q96S53 571 aa23.18■■□□□ 1.3
GCFC2-202ENST00000409857 HSPA5P11021 654 aaKnown RBP23.17■■□□□ 1.3
GCFC2-202ENST00000409857 TULP4Q9NRJ4 1543 aa23.17■■□□□ 1.3
GCFC2-202ENST00000409857 CADPS2Q86UW7 1296 aa23.15■■□□□ 1.3
GCFC2-202ENST00000409857 WASLO00401 505 aaPredicted RBP23.14■■□□□ 1.29
GCFC2-202ENST00000409857 NEFLP07196 543 aa23.14■■□□□ 1.29
GCFC2-202ENST00000409857 ATF3P18847 181 aa23.14■■□□□ 1.29
GCFC2-202ENST00000409857 ANP32EQ9BTT0 268 aa23.14■■□□□ 1.29
GCFC2-202ENST00000409857 EVC2Q86UK5 1308 aa23.13■■□□□ 1.29
GCFC2-202ENST00000409857 ANKARQ7Z5J8 1434 aa23.12■■□□□ 1.29
GCFC2-202ENST00000409857 USP32Q8NFA0 1604 aa23.11■■□□□ 1.29
GCFC2-202ENST00000409857 MST1RQ04912 1400 aa23.11■■□□□ 1.29
GCFC2-202ENST00000409857 ITSN1Q15811 1721 aa23.11■■□□□ 1.29
GCFC2-202ENST00000409857 PUS7Q96PZ0 661 aaKnown RBP23.1■■□□□ 1.29
GCFC2-202ENST00000409857 RGPD8O14715 1765 aaPredicted RBP23.09■■□□□ 1.29
GCFC2-202ENST00000409857 CDK19Q9BWU1 502 aa23.09■■□□□ 1.29
GCFC2-202ENST00000409857 TOPAZ1Q8N9V7 1692 aa23.09■■□□□ 1.29
GCFC2-202ENST00000409857 TMF1P82094 1093 aa23.09■■□□□ 1.29
GCFC2-202ENST00000409857 ATP7BP35670 1465 aa23.07■■□□□ 1.28
GCFC2-202ENST00000409857 C1orf167Q5SNV9 1468 aa23.06■■□□□ 1.28
GCFC2-202ENST00000409857 TOM1O60784 492 aa23.06■■□□□ 1.28
GCFC2-202ENST00000409857 DISP3Q9P2K9 1392 aa23.06■■□□□ 1.28
GCFC2-202ENST00000409857 CDCA8Q53HL2 280 aa23.05■■□□□ 1.28
GCFC2-202ENST00000409857 SLAIN2Q9P270 581 aa23.05■■□□□ 1.28
GCFC2-202ENST00000409857 KIF1AQ12756 1690 aa23.04■■□□□ 1.28
GCFC2-202ENST00000409857 SRPK2P78362 688 aaKnown RBP23.04■■□□□ 1.28
GCFC2-202ENST00000409857 ATAD2Q6PL18 1390 aa23.03■■□□□ 1.28
GCFC2-202ENST00000409857 RBM19Q9Y4C8 960 aaKnown RBP23.02■■□□□ 1.28
GCFC2-202ENST00000409857 PRR36Q9H6K5 1346 aa23.02■■□□□ 1.28
GCFC2-202ENST00000409857 NUDT16Q96DE0 195 aaKnown RBP23.02■■□□□ 1.27
GCFC2-202ENST00000409857 CABP2Q9NPB3 220 aa23.02■■□□□ 1.27
GCFC2-202ENST00000409857 UBAP1LF5GYI3 381 aa23■■□□□ 1.27
GCFC2-202ENST00000409857 ROBO1Q9Y6N7 1651 aa23■■□□□ 1.27
GCFC2-202ENST00000409857 CCDC61Q9Y6R9 512 aa22.99■■□□□ 1.27
GCFC2-202ENST00000409857 NINLQ9Y2I6 1382 aa22.98■■□□□ 1.27
GCFC2-202ENST00000409857 MYOM1P52179 1685 aa22.97■■□□□ 1.27
GCFC2-202ENST00000409857 NUTM2FA1L443 756 aa22.97■■□□□ 1.27
GCFC2-202ENST00000409857 PPIP5K1Q6PFW1 1433 aa22.96■■□□□ 1.27
GCFC2-202ENST00000409857 HNRNPUQ00839 825 aaKnown RBP eCLIP22.96■■□□□ 1.27
GCFC2-202ENST00000409857 NHSL1Q5SYE7 1610 aa22.96■■□□□ 1.27
GCFC2-202ENST00000409857 PLEKHG3A1L390 1219 aa22.95■■□□□ 1.26
GCFC2-202ENST00000409857 C11orf95C9JLR9 678 aaPredicted RBP22.95■■□□□ 1.26
GCFC2-202ENST00000409857 ESCO1Q5FWF5 840 aa22.95■■□□□ 1.26
GCFC2-202ENST00000409857 BRINP3Q76B58 766 aa22.95■■□□□ 1.26
GCFC2-202ENST00000409857 AKAP12Q02952 1782 aa22.94■■□□□ 1.26
GCFC2-202ENST00000409857 ORAI2Q96SN7 254 aa22.93■■□□□ 1.26
GCFC2-202ENST00000409857 WASHC2AQ641Q2 1341 aa22.93■■□□□ 1.26
GCFC2-202ENST00000409857 PHF8Q9UPP1 1060 aa22.93■■□□□ 1.26
GCFC2-202ENST00000409857 IRX6P78412 446 aaPredicted RBP22.92■■□□□ 1.26
GCFC2-202ENST00000409857 AHDC1Q5TGY3 1603 aaPredicted RBP22.92■■□□□ 1.26
GCFC2-202ENST00000409857 POLR3AO14802 1390 aaPredicted RBP22.92■■□□□ 1.26
GCFC2-202ENST00000409857 KIF7Q2M1P5 1343 aa22.92■■□□□ 1.26
GCFC2-202ENST00000409857 CCDC7Q96M83 1385 aa22.91■■□□□ 1.26
GCFC2-202ENST00000409857 CABP1Q9NZU7 370 aa22.89■■□□□ 1.26
GCFC2-202ENST00000409857 MON2Q7Z3U7 1717 aa22.89■■□□□ 1.25
GCFC2-202ENST00000409857 CD163L1Q9NR16 1453 aa22.88■■□□□ 1.25
GCFC2-202ENST00000409857 PIP4K2BP78356 416 aa22.87■■□□□ 1.25
GCFC2-202ENST00000409857 CPSF1Q10570 1443 aaKnown RBP22.87■■□□□ 1.25
GCFC2-202ENST00000409857 NPHP3Q7Z494 1330 aa22.86■■□□□ 1.25
GCFC2-202ENST00000409857 PMFBP1Q8TBY8 1022 aa22.86■■□□□ 1.25
GCFC2-202ENST00000409857 ACEP12821 1306 aa22.86■■□□□ 1.25
GCFC2-202ENST00000409857 PHLPP1O60346 1717 aa22.86■■□□□ 1.25
GCFC2-202ENST00000409857 TMC1Q8TDI8 760 aa22.85■■□□□ 1.25
GCFC2-202ENST00000409857 SLC12A5Q9H2X9 1139 aa22.85■■□□□ 1.25
GCFC2-202ENST00000409857 PXDNQ92626 1479 aa22.85■■□□□ 1.25
GCFC2-202ENST00000409857 TRPM3Q9HCF6 1732 aaPredicted RBP22.85■■□□□ 1.25
GCFC2-202ENST00000409857 BRD4O60885 1362 aaPredicted RBP22.84■■□□□ 1.25
GCFC2-202ENST00000409857 ANKRD36BQ8N2N9 1353 aa22.84■■□□□ 1.25
GCFC2-202ENST00000409857 CCDC184Q52MB2 194 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 46.3 ms